Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1280
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.2  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    25   2.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.9  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   8.9  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 847 HGVLETVVHLHHPLVV 800
           H +++T+VHL+HP  V
Sbjct: 382 HAIVQTLVHLNHPTKV 397


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 555 QEKRQQHAQKETEFLRLKRSRLGVEDFEPLK 647
           + ++QQ  Q++ +   +   RL V+D +PL+
Sbjct: 20  ERRQQQQQQQQLQTTSIAGGRLSVDDHQPLQ 50


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 652  ITFSGSKSSTPSLERLRRRNSVSFWACC 569
            + +S   S + S E ++ +NS+  + CC
Sbjct: 2985 VKYSNLTSDSQSYETIKNKNSLMRFECC 3012


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 847 HGVLETVVHLHHP 809
           H +++T+VHL HP
Sbjct: 386 HALIQTLVHLMHP 398


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 563 TSTACPKGN*IPSPQTFE 616
           TSTA P+G  + SP T E
Sbjct: 118 TSTAAPEGTSVASPTTAE 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,198
Number of Sequences: 2352
Number of extensions: 17569
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)