Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1278
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.50 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.66 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.66 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.1  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 220 TPSPPRILWNEPLNC 176
           TPS PR +  +PLNC
Sbjct: 62  TPSSPRSISEDPLNC 76



 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 373 RSRSSILTHYRWTKHSK*VQKRSQLATWRSRASTYG 480
           RS + + +H + T+H   +  + Q+ +WRS     G
Sbjct: 489 RSLAEMTSHMQQTQHYTNIISQEQIISWRSSDDAKG 524


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 280 VQDPSMSRHTPRDHHFLVPQTP 215
           +Q+P  S+H PR H +   + P
Sbjct: 98  LQEPQPSQHCPRKHGYFAHEEP 119


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 217  PSPPRILWNEPLNCVAT*LYSF 152
            PS  RI WN  LNCV   L  F
Sbjct: 1118 PSKIRICWNVLLNCVYLFLCGF 1139


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 254 YTTRSPFPSATNTFPSTNTM 195
           Y T+S  PSA+  FP   T+
Sbjct: 4   YFTQSTSPSASEAFPGGRTL 23


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 380  LDRGVGRAPKLPSRE 336
            L+RG+G  P  PSRE
Sbjct: 987  LNRGLGLIPDNPSRE 1001


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 105 LSAQPHCGLVSSCCI 61
           +  QP+C L +SC +
Sbjct: 477 IKGQPYCSLPNSCAL 491


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 105 LSAQPHCGLVSSCCI 61
           +  QP+C L +SC +
Sbjct: 484 IKGQPYCSLPNSCAL 498


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = -2

Query: 320 RSAAGTNADSATFSPRSINVPTYTTRSPFPSATNTFPSTNTM 195
           RS A + +  A F         Y    PFP     +P T+ M
Sbjct: 178 RSTAASRSRLAAFKRTIALGAFYQPLQPFPPPYPFYPGTSAM 219


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 597 YVIAAVQHLAELAEVMLISASC 532
           Y +  V+HL  +A   + S SC
Sbjct: 189 YKVFPVEHLLFIANAFITSQSC 210


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +2

Query: 290 HYQRWYRQHSGEQHVALGREAL 355
           ++  W+ +H G+  VA G   +
Sbjct: 138 YFSPWFAEHMGQIKVASGNHTV 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,429
Number of Sequences: 336
Number of extensions: 3805
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)