Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1278
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 55 5e-08
SB_32303| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_54375| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_54329| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.16) 34 0.10
SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002) 30 1.3
SB_48404| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0) 30 1.7
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 29 2.2
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 29 2.2
SB_32178| Best HMM Match : TBC (HMM E-Value=3.2e-06) 29 2.9
SB_49697| Best HMM Match : DUF602 (HMM E-Value=3) 29 2.9
SB_46414| Best HMM Match : Extensin_2 (HMM E-Value=0.31) 29 2.9
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_26841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7) 28 5.1
SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 28 6.8
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 28 6.8
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_28627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 9.0
SB_14324| Best HMM Match : Ank (HMM E-Value=1.7e-28) 27 9.0
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 27 9.0
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 27 9.0
SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5) 27 9.0
SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08) 27 9.0
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 115 IHVYNCMDNIRIKKNKVKLQHNSGVHSIVFVEGKVFVALGNGDLVVY 255
I+VY D I+ KK K+++QHN+ VH I++V+ +VFVALGNGDL VY
Sbjct: 309 IYVYPVQD-IQQKK-KMRIQHNAAVHCILYVDNQVFVALGNGDLCVY 353
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 276 WTERSTISVGTGS-TPVSSMLLSGGKLWCATHASIKIINPHTLQVDETFQIS-SETKPIS 449
W S I V GS PV+ M G+LWC + I+N TL+++ TF S + + +
Sbjct: 361 WEVSSPIIVPVGSGAPVTCMTAVHGRLWCGCQCNAIIVNTTTLKIERTFNCSLDKERAVY 420
Query: 450 HMAVAGVNIWLSLHNAAQLR 509
+ +G+ +WLSL ++A +R
Sbjct: 421 RLVSSGMGVWLSLQSSATVR 440
>SB_32303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 RDIDGSWTERS--TISVGTGSTPVSSMLLSGGKLWCATHASIKIINPHTLQVDETFQISS 431
R DG W + + +G + M + K+WC I++I+P T++V++TF
Sbjct: 792 RSSDGQWNFNNYHLLDLGRPHHSIRCMAMVHDKVWCGYRNKIQVIHPRTMRVEKTFDAHP 851
Query: 432 ETK-PISHMAVAGVNIWLSLHNAAQLR 509
+ + +A G +W+S+ + LR
Sbjct: 852 RRESQVRQLAWIGDGMWVSIRLDSTLR 878
Score = 26.6 bits (56), Expect(2) = 0.92
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 82 PTMWLGTEDGCIHV 123
PTMWLG + GC HV
Sbjct: 762 PTMWLGAQSGC-HV 774
Score = 22.6 bits (46), Expect(2) = 0.92
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 184 GVHSIVFVEGKVFVALGNGDLVVY 255
G S V+G+V VAL +G + ++
Sbjct: 767 GAQSGCHVKGRVLVALADGTVAIF 790
>SB_54375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 85 TMWLGTEDGCIHVYNCMDNIRIKKNKVKLQHNSGVHSIVFVEGKVFVALGNGDLVVY 255
T+WLGTE G +HVY + + K VK + V V VAL +G L+ Y
Sbjct: 18 TVWLGTESGTLHVYCAITYRELCKGVVKCAKYILSMTHVPRCNWVLVALADGSLLAY 74
>SB_54329| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.16)
Length = 313
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 85 TMWLGTEDGCIHVYNCMDNIRIKKNKVKLQHNSGVHSIVFVEGKVFVALGNGDLVVY 255
T+WLGTE G +HVY + + K VK + V V VAL +G L+ Y
Sbjct: 243 TVWLGTESGTLHVYCAITYRELCKGVVKCAKYILSMTHVPRCNWVLVALADGSLLAY 299
>SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002)
Length = 765
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 264 CPDIHHEITIS*CHKHLPLHEYYGMNP*IVLQLDFILFD 148
CP I T KH+P+H Y+ P + L +D IL D
Sbjct: 653 CPSIPFSTT-----KHVPVHRYHSPRPSMCLSIDTILHD 686
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 264 CPDIHHEITIS*CHKHLPLHEYYGMNP*IVLQLDFILFD 148
CP I T KH P+H Y+ P L +D IL D
Sbjct: 501 CPSIPFSTT-----KHPPVHRYHSPRPSTCLSIDTILHD 534
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 222 KHLPLHEYYGMNP*IVLQLDFILFD 148
KH P+H+Y+ P L +D IL+D
Sbjct: 472 KHPPVHQYHSPRPSTRLFIDTILYD 496
>SB_48404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 524 CSYCSTQLRRVVQREPYVDARDRH-VANWL 438
C+ C+T LR + P VDAR RH ++ W+
Sbjct: 110 CNECATHLREKINEHP-VDARSRHYLSQWM 138
>SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0)
Length = 991
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 423 ISSETKPISHMAVAGVNIWLSLHNAAQL---RATIRTLASSSPRSTSLPQVQQDVARL 587
I++ETKP+ +AG N WL+L + A A + L + R+ LP + R+
Sbjct: 933 INTETKPVGAHNMAGCNTWLTLGSTACRPGGEARLPPLRKCTQRARPLPPLHVRTLRI 990
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 302 NADSATFSPRSINVPTYTTRSPFPSATNTFPS-TNTME 192
+A S +P S P+ TR P PS T T PS TN+ +
Sbjct: 9 SAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNSTQ 46
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 305 TNADSATFSPRSINVPTYTTRSPFPSATNTFPSTNTME*TPE 180
T + + +++P +I P TT++P +T P T + TPE
Sbjct: 70 TTSTTVSWAPITITKPQSTTKAPETQSTTESPETQSTTETPE 111
>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 279 TERSTISVGTG---STPVSSMLLSGGKLWCATHASIKIINPHTLQVDETFQISSETKPIS 449
T R+T+ + T ++P SSM G K W + + + P L +P +
Sbjct: 681 TTRATVPLQTTMIEASPDSSM--DGEKEWYYGNKEKERLGPFGLSEMRDMWAEGTLRPET 738
Query: 450 HMAVAGVNIWLSLHNAAQLRATIRTLASSSP 542
G++ W LH AQL+ ++ +A+SSP
Sbjct: 739 KCWAQGMDGWRPLHTIAQLKWSL--MATSSP 767
>SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1603
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 267 DGSWTERSTISVGTGSTPVSSMLLSGGKLWCATHASIKIIN 389
DG W ++G + + S+ + LWCA+ I +I+
Sbjct: 1041 DGVWDFSQPKAIGLSKSSIMSIATTANSLWCASANKIHVID 1081
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 344 SREQHAAHRSAAGTNADSATFSPRSINVPTYTTRSPFPSATNTFPSTN 201
+ +Q AA + +SAT PR P+YT+ + + S T+ P+T+
Sbjct: 113 AEDQLAARVGYIELDLNSATRPPRYTPTPSYTSTTSYTSTTSYTPTTS 160
>SB_32178| Best HMM Match : TBC (HMM E-Value=3.2e-06)
Length = 759
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 300 VGTGSTPVSSMLLSGGKLWCATHASIKIINPHTL-QVDETFQISSETKPISHMAVAGVNI 476
V GS PV+ + GK+WC ++ +++ +L ++ S + + +
Sbjct: 363 VRIGSAPVTCVAYVSGKVWCGCGNNVVVLDASSLEELHSAVMSPSPRHQVGRLLAGDHGV 422
Query: 477 WLSLHNAA 500
W ++ ++
Sbjct: 423 WCTIRGSS 430
>SB_49697| Best HMM Match : DUF602 (HMM E-Value=3)
Length = 294
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 392 RIDDLDRGVGRAPKLPSREQHAA---HRSAAGTNADSATFSPRSINVPTYTTRSPFPSAT 222
R+ +D R+P +P A+ H S+ T A ++T + ++P TT +P T
Sbjct: 109 RVSRVDDPSSRSPIMPRPSTPASTSNHESSPSTTASTSTSTSNHESLPLMTTSTPTNEET 168
Query: 221 NTFPSTNTME*TPE 180
+ S T P+
Sbjct: 169 SANISLGTQPEAPK 182
>SB_46414| Best HMM Match : Extensin_2 (HMM E-Value=0.31)
Length = 469
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 222 KHLPLHEYYGMNP*IVLQLDFILFD 148
KH P+H Y+ + P + L +D IL+D
Sbjct: 241 KHPPVHRYHSLRPSMRLFIDTILYD 265
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 222 KHLPLHEYYGMNP*IVLQLDFILFD 148
KH P+H Y+ P L +D IL+D
Sbjct: 393 KHPPVHRYHSPRPSTGLSIDTILYD 417
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 366 HASIKIINPHTLQVDETFQISSETKPISHMAVAGVNIWLSLHNAAQLRATIRT 524
H + +I+ H L+ + + S+ET IS+ ++ + HN + + +IRT
Sbjct: 141 HRFLSLIDKHFLKTTNSKKPSTETIKISYSCMSNTKQIIDSHNKSIIALSIRT 193
>SB_26841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 371 GVGRAPKLPSREQHAAHRSAAGTNADSATFSPRSIN 264
G GR + ++++H++++ G +DS TFS S +
Sbjct: 1028 GFGRPERSRTQQEHSSYKGGFGIPSDSQTFSRTSFS 1063
>SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7)
Length = 106
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 371 GVGRAPKLPSREQHAAHRSAAGTNADSATFSPRSINVPTYTTRSPFPSAT 222
G +P PS +H+ ++ A N +S T PR+ NV T R P PS++
Sbjct: 18 GEKASPSRPSPPRHSI-QAPAPRNTESRT--PRTTNVATGKPRIPTPSSS 64
>SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 243 SRGVCRDIDGSWTERSTISVGTGSTPVSSMLLSGGKLW 356
SR C + DG+W+++ + VGT PV+ +G W
Sbjct: 749 SRIFCLE-DGTWSDKMPVCVGTPKCPVNWQEYNGRCYW 785
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 340 REGSFGARPTPRSRSSILTHYRWTKHSK*VQKRSQLATWRSRASTYGSRCTTRRNCVLQY 519
R+GS P RSRS R + S+ + RS+ RSR+++ R + R+ Q
Sbjct: 233 RKGSH--TPKKRSRSPRRNSQRHKERSRYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQR 290
Query: 520 E-HSRAARRDQHHFRKFSK 573
+ SR+ R + H RK S+
Sbjct: 291 KSRSRSRNRSRSHSRKRSR 309
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 222 KHLPLHEYYGMNP*IVLQLDFILFD 148
KH P+H Y+ + P L +D IL D
Sbjct: 379 KHPPVHRYHSLRPSTRLSIDTILHD 403
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 317 SAAGTNADSATFSPRSINVPTYTTRSPFPSATNTFPSTNT 198
SAA T A T P + PT + +AT T P+T T
Sbjct: 779 SAATTTAPPTTAPPTTTKEPTTDASTSTSAATTTAPATTT 818
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 115 IHVYNCMDNIRIKKNKVKLQHNSGVHSIVFVEGKVFVALGNGDL 246
+ + C+ ++++++KL+ GVH +V G+VF + G L
Sbjct: 3 VKCHACIGGTNVREDRMKLEE--GVHVVVGTPGRVFDMINRGVL 44
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 115 IHVYNCMDNIRIKKNKVKLQHNSGVHSIVFVEGKVFVALGNGDL 246
+ + C+ ++++++KL+ GVH +V G+VF + G L
Sbjct: 188 VKCHACIGGTNVREDRMKLEE--GVHVVVGTPGRVFDMINRGVL 229
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 296 QRWYRQHSGEQHVALGREALVRDPRLDQDHQ 388
QR Y Q Q LGRE P+L DHQ
Sbjct: 38 QRLYSQQGALQKGQLGREVKGETPQLHPDHQ 68
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 356 PKLPSREQHAAHRSAAGTNADSATFSPRSINVPTYTTRSPFPSATNTFPSTNTME*TP 183
P PS + S T + +T S S T+T +P +T + PST +M TP
Sbjct: 643 PSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTP 700
>SB_28627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 376 IEAWVAHQSFPPESNMLLTGVLPVPTLIVLRSVQDPSMSRHTPRDHHFLVPQTPSPPRIL 197
+ AW Q F P+S+ + G+ + ++VQ SRH + V Q+ PP L
Sbjct: 261 LTAWHNTQEFTPKSSTVYQGIQNAQPMSQNQNVQSSDPSRHYNGIPNQNVTQSYQPP--L 318
Query: 196 WNEPLNCVA 170
+ +N +A
Sbjct: 319 QTDSVNQIA 327
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 366 HASIKIINPHTLQVDETFQISSETKPISHMAV 461
HAS+ + HT + D QI SE ++H V
Sbjct: 139 HASVTLAESHTFRRDVEIQIKSEDPFVAHALV 170
>SB_14324| Best HMM Match : Ank (HMM E-Value=1.7e-28)
Length = 631
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 464 GRQHMALAAQRGATACYNTNTREQLAEINI 553
GR + +AA+RG C++T + A+IN+
Sbjct: 59 GRTPLHMAAERGNELCFSTLINDAPADINV 88
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 27.5 bits (58), Expect = 9.0
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = -2
Query: 299 ADSATFSPRSINVPTYTTRSPFPSATNTFPSTNTME*TPELCCNLTLFFLILILSMQLYT 120
A+S P S +VP TT P P+AT+T + TM +P N+T + L+ L +
Sbjct: 698 ANSTMILP-STSVPYNTTFIPAPNATST--AATTM--SPSYVANMTTLDSSVSLTRSLLS 752
Query: 119 WMQPSSVPSHIVGWLAVVALSSED*RLA 36
S+ + I+ + V + RLA
Sbjct: 753 TTLIPSISTSILPYNTTVIATPNTTRLA 780
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -2
Query: 377 DRG--VGRAPKLPSREQHAAHRSAAG-TNADSATFSPRSINVPTYTTRSPFPSATNTFPS 207
D+G VG + L Q ++ RS G +D A + + ++ P+Y R P ++T S
Sbjct: 337 DKGGVVGESAILSQGSQGSSPRSEDGKVESDIALAAEQELSEPSYIERKPLVEVSDTGES 396
Query: 206 TNTME*TPELCC 171
T P C
Sbjct: 397 APTESEQPAPVC 408
>SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5)
Length = 394
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 366 HASIKIINPHTLQVDETFQISSETKPISHMAV 461
HAS+ + HT + D QI SE ++H V
Sbjct: 213 HASVTLAESHTFRRDVEIQIKSEDPFVAHALV 244
>SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08)
Length = 469
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 222 CGTRKW*SRGVCRDIDGS 275
CG RKW G+C +ID S
Sbjct: 415 CGNRKWCISGICVNIDDS 432
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,587,292
Number of Sequences: 59808
Number of extensions: 498758
Number of successful extensions: 1820
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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