Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1276X
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 35 0.044
SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 31 0.71
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_16799| Best HMM Match : Extensin_2 (HMM E-Value=0.063) 31 0.71
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 30 0.94
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 30 0.94
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 29 1.6
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 1.6
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 29 1.6
SB_10884| Best HMM Match : Antimicrobial11 (HMM E-Value=0.091) 29 1.6
SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16) 29 2.2
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 29 2.2
SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39) 29 2.2
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 29 2.2
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_21129| Best HMM Match : Pkinase (HMM E-Value=2.5e-07) 28 3.8
SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 28 3.8
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 28 5.0
SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13) 28 5.0
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_36917| Best HMM Match : RinB (HMM E-Value=2.2) 28 5.0
SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_9602| Best HMM Match : RVT_1 (HMM E-Value=1.6) 28 5.0
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 28 5.0
SB_55199| Best HMM Match : PKD (HMM E-Value=0.75) 28 5.0
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 28 5.0
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8) 27 6.6
SB_23596| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_22673| Best HMM Match : FixQ (HMM E-Value=7.6) 27 6.6
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 27 6.6
SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_29067| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_23826| Best HMM Match : MFMR (HMM E-Value=7.3) 27 8.8
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 27 8.8
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_48866| Best HMM Match : Histone (HMM E-Value=5.29971e-42) 27 8.8
SB_40034| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10) 27 8.8
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +1
Query: 37 PTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPS 216
P+ P+ +PSP S+P T S + S H S++P+S PS +PSS P+
Sbjct: 515 PSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSDPSPN 574
Query: 217 PDHDRPGKDTVDTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAPVSMLRHSAPN- 393
P D + + R P + R N + N +P + S+ + +PN
Sbjct: 575 PSSDPSLSFSPSSSSSPSVRPSPNLISNPNRNSNSNSNRN-PNPSSNPSPSLSPNPSPNP 633
Query: 394 -DQQLTHHDSKTS 429
+H S T+
Sbjct: 634 STSPYRNHSSNTN 646
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 49 PTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSP 219
P P PSP +S+P + SP S + S++P+S PS +PSS P+P
Sbjct: 475 PRPHPSPHPSSNP---SPNPSPN-PSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNP 527
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 49 PTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS--FTDPSPD 222
P PSPR SP+ + SP SS S +P+S PS +PSS ++PSP+
Sbjct: 469 PISNPSPRPHPSPHP-SSNPSPNPSPNPSSD-PSPNPSSNPSSDPSPNPSSNPSSEPSPN 526
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +1
Query: 37 PTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPS 216
P+ P+P PSP +S P S + S+ P+ + PS S ++P
Sbjct: 483 PSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPH 542
Query: 217 P 219
P
Sbjct: 543 P 543
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +1
Query: 31 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSS-TSPASRFMGTPSEDPSSFT 207
S R P P +P + SP SP HSS T+P PS +PS
Sbjct: 609 SNSNRNPNPSSNPSPSLSP-----NPSPNPSTSPYRNHSSNTNPNPSLGPNPSHNPSFSL 663
Query: 208 DPSPDHDR 231
P+P+ ++
Sbjct: 664 SPNPNQNK 671
Score = 27.9 bits (59), Expect = 5.0
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +1
Query: 37 PTRIPTPQPS--PRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPAS--RFMGTPSEDPSS- 201
P+ P+P PS P SP + S +S+ STSP S PS PSS
Sbjct: 495 PSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSN 554
Query: 202 -FTDPSPD-HDRPGKD 243
++PSP+ P D
Sbjct: 555 PSSEPSPNPSSNPSSD 570
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 34.7 bits (76), Expect = 0.044
Identities = 22/101 (21%), Positives = 43/101 (42%)
Frame = +1
Query: 1 DVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGT 180
D+ + + G P +P P + S ++ +PY+ GKS + H+ ++ G
Sbjct: 713 DMSEDIEGTPVEPKGTPLRRSSRKRQLTPYHSGKGKS-----RLGEDHAEELVPAKQAGA 767
Query: 181 PSEDPSSFTDPSPDHDRPGKDTVDTQQRCQSRDDPVRLMAN 303
P+ P + S D GK + + R ++D + + N
Sbjct: 768 PARYPVNSVSDSDDEGARGKALLGSTGRSAKKEDNIVSIGN 808
>SB_4753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 34.7 bits (76), Expect = 0.044
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 PTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPA-SRFMGTPSEDPSSFTDP 213
P R PT PSP + SP S S+ H SPA S P+E+P S + P
Sbjct: 340 PQRTPTTTPSPFELGSPEKSPFADSDPVGPAASARHPHYSPAESACAPLPNEEP-SVSPP 398
Query: 214 SPDHDRPGKDTVDTQQRCQSRDDPVRLMANT 306
+ + + + + C++R P R T
Sbjct: 399 QQEKAAAPQPQLHSPRPCRARRTPKRYEPET 429
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +1
Query: 37 PTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPS 216
P + TP P TS +S R L +T+P+ +G+P + P F D
Sbjct: 502 PPAVATPPHQPCHTSEQRQ----RSQRPPALSPQRTPTTTPSPSELGSPEKSP--FADSD 555
Query: 217 PDHD 228
P H+
Sbjct: 556 PQHE 559
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 MSWIRYSVCRRSQLGYPLLSRV-LERLQARII 94
M W+RYS R YPLL R+ L R++++I+
Sbjct: 201 MEWLRYSADTRGHFAYPLLRRLHLMRVESQIL 232
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 30.7 bits (66), Expect = 0.71
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDP-SSF 204
P P + P SPR SP SPR +Q +S H S S P++ P S
Sbjct: 2161 PMSPQQGGLPSQSPRPVMSPQPHANTLSPR-QQTMSPAHPQQSLTS---PRPAQSPHQSH 2216
Query: 205 TDPSPDHDRP 234
DPS D+P
Sbjct: 2217 MDPSNLGDKP 2226
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 0.71
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 40 TRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSP 219
T +P Q SP+ TS T SP+ SS +ST S T + P + T PS
Sbjct: 651 TSLPKQQTSPKVTSPQQTST---SPQETSTSSSKQTSTQQTSSSQQTSTSPPQTTTSPSQ 707
Query: 220 D-HDRPGKDTVDTQQRCQS 273
P + T Q+ S
Sbjct: 708 QTSTSPPQTTTSPSQQTTS 726
>SB_16799| Best HMM Match : Extensin_2 (HMM E-Value=0.063)
Length = 597
Score = 30.7 bits (66), Expect = 0.71
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 52 TPQPSPRKT---SSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTP---SEDPSSFTDP 213
TP+PSP K SSP Y ++P V G+ + P+ +P SE +S +
Sbjct: 100 TPKPSPTKVNDRSSPTYERSPRTPNEAIPVKPGYHYSRPSELSQKSPRQYSERSTSQSSG 159
Query: 214 SPDHDRPGKDTV 249
+P+ R G+ +
Sbjct: 160 TPEFSRIGRSPI 171
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.7 bits (66), Expect = 0.71
Identities = 24/94 (25%), Positives = 42/94 (44%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFT 207
P Q R TP PSPR+ + + +S S S R G+ + S +
Sbjct: 952 PPQRKRASTP-PSPRRARRKVASPEEQDRQKSNGRNSRSVSPSAVKRTKGSKRSESRSVS 1010
Query: 208 DPSPDHDRPGKDTVDTQQRCQSRDDPVRLMANTR 309
SP+ DR G+D+ +++ S + P R+ +++
Sbjct: 1011 R-SPERDRKGRDSAKKERQSHS-ESPQRVTKSSK 1042
>SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 348
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +1
Query: 46 IPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDH 225
IP PSP +SS + P Y +S HSS P G P +P + P P H
Sbjct: 273 IPASSPSPVSSSSAH-------PSYSGGAASIHSSPVPIQN--GLPPGNPGQYVTPQPRH 323
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 30.3 bits (65), Expect = 0.94
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Frame = +1
Query: 61 PSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDHDRPGK 240
P TS+P P L+SS +S S ++ G P P+S + P+P PG
Sbjct: 776 PGVSSTSAPSNNHDQPIPAIPSLMSSTLTS-SISTTSTGMP---PASLSTPTPFFTHPGF 831
Query: 241 DTVDTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAPVSMLRHSAPNDQQ----LT 408
T S D ++L A++ V+ S + P ++ +A ND +
Sbjct: 832 STKPVTTSPTSLSDQLKLFASSSTSSVSTS------ASSKPAALPSSAASNDDDFADFME 885
Query: 409 HHDSKTSLASLQTEN 453
K+S++S+ TE+
Sbjct: 886 AEPVKSSVSSITTES 900
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 30.3 bits (65), Expect = 0.94
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 31 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSS--TSPASRFMGTPSEDPSSF 204
SQP P P P T++P + P + + SS T P SR P++ S+
Sbjct: 97 SQPATTTVPAPPPSSTTAPVNAPAQQQPLLQPQRPTPPSSYPTQPPSRH---PTQTQSAI 153
Query: 205 TDPS-PD-HDRPGK 240
T PS PD ++ GK
Sbjct: 154 TGPSHPDKNESQGK 167
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 30.3 bits (65), Expect = 0.94
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 121 EQLVSSGHSST-SPASRFMGTPSEDPSSFTDPSPDHDRPGKDTVDTQQRCQSRDDPVRLM 297
EQL +SS S ++R T S PS P P ++PG D +D + + + +++
Sbjct: 2293 EQLQKDANSSPGSNSTRSPSTGSHSPSVPPPPPPPPEQPG-DAMDIEDE-EGQPSGSKIL 2350
Query: 298 ANTRVGRVNLSL 333
NT + L+L
Sbjct: 2351 VNTPIAPTRLAL 2362
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 336 VERKVHSADASVRHEPNGIVAALASLLGINCILSWPIM 223
V KV +A + +P G+ A+ L IN IL+W I+
Sbjct: 203 VGEKVRCKEARLMTQPQGLNGMQAATLPINIILAWKIL 240
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 273 PRRSRSAHGEHSRRQSEPFAQHSASXDRRTSLDAAALRP 389
P+ S S HG+HS R + + +S RRTS + +P
Sbjct: 172 PKTSSSGHGQHSSRTAVRRSASFSSSQRRTSESESRSKP 210
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.5 bits (63), Expect = 1.6
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSP-----YYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSED 192
P +PT P+ +PSP K P +++ K P +VS H T P S +
Sbjct: 950 PKEPTPPPSSKPSPVKEIKPKKPIEKFISRPKPPTPPPVVSP-HKQTRPISPVGASNLYK 1008
Query: 193 PSSFTDPSPDHDRPGKDTVDTQQRCQSRDDPV---RLMANTRVGRVNLSLNIVHPXTVAP 363
P T SP +P K D+ S+ PV ++ ++ LN P V P
Sbjct: 1009 P--LTPTSPSTLQPSKQ--DSLVYVSSKSKPVTPESVLNQSKPVTPESVLNQSKP--VTP 1062
Query: 364 VSMLRHSAPNDQQLTHHDSK 423
S+L S P + + SK
Sbjct: 1063 ESVLNQSKPVTPESVLNQSK 1082
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 7 LDSLLGLP--SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGT 180
L+ LLG P ++PT+ P +P P+K + P ++ +Q V SG F T
Sbjct: 169 LEELLGTPPTAKPTKAPNKKPVPKKPAPPPLRRSTRNTSQQQ-VGSGRKRVRGERAFQPT 227
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +1
Query: 49 PTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFM--GTPSEDPSSFTDPSPD 222
PT PSP T+S Y T + +S+ +++SP TPS PS S
Sbjct: 752 PTISPSPNGTTSSVYETIAVNATPSISLSTNETASSPYETIAVNSTPSISPSPNGTTSFM 811
Query: 223 HDRPGKDTVDTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAP 363
++ + T R + + A + +G S + +VAP
Sbjct: 812 YETIAVNATSTSVRTSKVYETILPNATSTIGLSQNSSRLFETDSVAP 858
>SB_10884| Best HMM Match : Antimicrobial11 (HMM E-Value=0.091)
Length = 479
Score = 29.5 bits (63), Expect = 1.6
Identities = 30/118 (25%), Positives = 49/118 (41%)
Frame = +1
Query: 19 LGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPS 198
L LP++ T PT + + P K +S+ + P + P+E+
Sbjct: 356 LKLPTEDTPYPTHLSTDNRKGRPNLKLPTKDTPNPTHLSTDNRKGRPNLKL---PTENIP 412
Query: 199 SFTDPSPDHDRPGKDTVDTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAPVSM 372
T S D R G+ + ++ DP L +TR GR NL LNI ++ V++
Sbjct: 413 DPTHLSTD-TREGRPNLKLPT--ENIPDPTHLSTDTREGRPNLILNIHSNSSIPGVAL 467
>SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16)
Length = 1003
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +1
Query: 88 YYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDHDRPGKDTVDTQQRC 267
Y T K+ + SSG S + SR PS DPSS D R + + R
Sbjct: 891 YRATESKAEQSSLEPSSGVQSRATESR-AEQPSPDPSSRVQSRADESRAEQSSPGAGTRV 949
Query: 268 QSRDD 282
QSR D
Sbjct: 950 QSRAD 954
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Frame = +1
Query: 61 PSPRKTSSPYYL--TGGKSP-RY------EQLVSSGHSSTSPASRFMGTPSEDPSSFTDP 213
P+P+KT S YY+ G P R+ Q S P + G P +DP DP
Sbjct: 231 PTPQKTKSDYYVRPVAGPQPVRFPSFAAATQAPSQFQPQPQPQTDSCGGPGQDPCGNEDP 290
Query: 214 SP 219
P
Sbjct: 291 DP 292
>SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39)
Length = 407
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3
Query: 363 WCDGLRMHYVERKVHSADAS 304
W +GL M YV++K++ ADAS
Sbjct: 224 WPNGLAMDYVDKKIYWADAS 243
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/75 (25%), Positives = 26/75 (34%)
Frame = +1
Query: 10 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSE 189
+S +G P T P PQP P P ++ G P + SP+ G P
Sbjct: 59 ESGVGPPVASTP-PAPQPVPNNMGPPPHVNQGPPPNSANQAPPPNPGPSPSFNSQGPPQR 117
Query: 190 DPSSFTDPSPDHDRP 234
P P +P
Sbjct: 118 LPLQGFPSGPGQAQP 132
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 25 LPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG 141
+PS PT+ PTP P+ + P +T G Q+ +G
Sbjct: 479 VPSAPTQAPTPTPAAPTHAPPAPMTNGADLAIPQMQVAG 517
>SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1101
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 1 DVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRY 120
D+L+SL +P+ PTR PS K P G R+
Sbjct: 87 DILNSLTQIPAPPTREQLGPPSKHKKLRPIEQNGSSPARH 126
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 RLQARIILPVARALDTNNW*AVGTVVRP-RRQGSWAHRVRTQAPSRTPVPTMIGQERIQL 250
R + I P + TN + TV+ P + + AH +TQAP +PV T R+ L
Sbjct: 985 RRYPKTIAPSQSPIKTNAAPSESTVIDPLQAKRRIAHAPKTQAPKPSPVKTSKPNTRVNL 1044
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 28 PSQPTRIPTPQP--SPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS 201
P+ P I +P SP T+SP SP +S +S SP S P+S
Sbjct: 86 PNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 145
Query: 202 FTDPSPDHDRPGKDTVDTQQRCQSRDDP 285
P+ + ++ ++ S + P
Sbjct: 146 PNSPNSPNSPNSPNSPNSPNSPNSPNSP 173
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/86 (22%), Positives = 33/86 (38%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFT 207
P+ P +P SP +SP + SP +S +S SP S P+S
Sbjct: 71 PNSPNSPNSPN-SPNSPNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPN 129
Query: 208 DPSPDHDRPGKDTVDTQQRCQSRDDP 285
P+ + ++ ++ S + P
Sbjct: 130 SPNSPNSPNSPNSPNSPNSPNSPNSP 155
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Frame = +1
Query: 49 PTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPS--PD 222
P P PSP T SP +PR+ S P +PS ++F P+
Sbjct: 786 PAPIPSPTSTGSPQTPLTPHTPRFPNTAPSPGEPNKPPF----SPSNHQAAFPTPAGFST 841
Query: 223 HDRPGKDTVDTQQRCQ 270
R D+ DT+ Q
Sbjct: 842 QKRLNNDSSDTETHPQ 857
>SB_21129| Best HMM Match : Pkinase (HMM E-Value=2.5e-07)
Length = 786
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 64 SPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDHDRPGKD 243
S +T++P + GKS + +S H SPA P+E ++ TDPSP H G
Sbjct: 644 STAQTTNPAF--PGKSRKTSPSKTSRHKQ-SPAQPI---PAEVANAKTDPSPHHYVEGSS 697
Query: 244 TVDTQQRCQ 270
+ + C+
Sbjct: 698 PIPSAHVCK 706
>SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1744
Score = 28.3 bits (60), Expect = 3.8
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = +1
Query: 64 SPRKTSSPY-----YLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDHD 228
S RK+ +PY + G K G T +S F P+ P+ D PD D
Sbjct: 1656 SKRKSDTPYDARPRMIVGKKGSMVTAQDEDGVKVTRNSSFFKRVPA--PAEDQDDVPDQD 1713
Query: 229 RPGKDTVDTQQRCQSR 276
RP + V QR R
Sbjct: 1714 RPTQADVTPPQRYPQR 1729
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 3.8
Identities = 24/99 (24%), Positives = 35/99 (35%)
Frame = +1
Query: 22 GLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS 201
G P QP + Q + PY +SP Y+Q S P + P++
Sbjct: 473 GAPQQPYQQQPSQGRRGQLQQPY----AQSP-YQQPPQQQQQSRGPYQQTAQHPNQQGGR 527
Query: 202 FTDPSPDHDRPGKDTVDTQQRCQSRDDPVRLMANTRVGR 318
P P + R G T QQ + + P + GR
Sbjct: 528 GQAPPPSYGRGGPTTTVQQQPPPTGEAPAHMGGAPSYGR 566
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 49 PTPQPSPRKTSSPYYLTGGKSPRYEQLVS----SGHSSTSPASRFMGTPSEDPSSFTDPS 216
P PQP+ +K +S + ++P +EQ S + HS SPAS + +E ++ + S
Sbjct: 544 PPPQPAIKKVASSPQFSYNQTPLFEQSQSYEEMNFHSPESPASGLVLLQAE--ANRLNHS 601
Query: 217 PDH 225
P H
Sbjct: 602 PSH 604
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +1
Query: 28 PSQPT--RIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS 201
PS PT PT P S P TG P + T P + T DP+
Sbjct: 64 PSDPTVPSDPTAPSDPTAPSDPTGPTGPSDPTLSSDPTGPSDPTGPTAPSDPTGPSDPTV 123
Query: 202 FTDPSPDHD 228
+DP+ D
Sbjct: 124 PSDPTGQSD 132
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = +1
Query: 28 PSQPT--RIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS 201
PS PT P+ P + P TG P ++ T P+ T DP+
Sbjct: 103 PSDPTGPTAPSDPTGPSDPTVPSDPTGQSDPTAPSDPTAPSDPTGPSDPTAPTGPSDPTG 162
Query: 202 FTDPSPDHDRPG 237
+DP+ D G
Sbjct: 163 PSDPTVSSDPTG 174
>SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13)
Length = 557
Score = 27.9 bits (59), Expect = 5.0
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +1
Query: 43 RIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG---HSSTSPASRFMGTPSEDPSSFTDP 213
R PTP + +K S LT K L + H+ T F TP++ P
Sbjct: 250 RSPTPLLTTQKWSPTPLLTTQKCSPTPLLTTQKVFPHTPTDHPKVFPHTPTDHPKVIPHT 309
Query: 214 SPDHDRPGKDT-VDTQQRCQSRDDPV 288
DH +P T D + +S D PV
Sbjct: 310 PTDHPKPVPHTPTDHPKVVESFDVPV 335
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 22 GLPSQPTRIPTPQPSPRKTSSPY 90
GLPS PT P P P P+ T Y
Sbjct: 719 GLPSYPTLPPPPPPPPQTTPFGY 741
>SB_36917| Best HMM Match : RinB (HMM E-Value=2.2)
Length = 522
Score = 27.9 bits (59), Expect = 5.0
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +1
Query: 49 PTPQPSPRKTSS-PYYLTGGKSPRYEQLV---SSGHSSTSPASRFMGTPSEDPSSFTDPS 216
P P +PR S P KS E V SS H T ASR G P+ SS+ S
Sbjct: 86 PEPPIAPRPPSGRPQSRRRKKSATNELRVRRKSSHHKYTEDASRLTGLPTHRISSYKRDS 145
Query: 217 P 219
P
Sbjct: 146 P 146
>SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 31 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTD 210
+Q + PSP ++SP + +G ++ L +S + S F TP PS+
Sbjct: 714 NQQAELAAKMPSPSSSASPCFTSGAENFDNSGLNTSHEQHIT--SSFTSTPL--PSALEY 769
Query: 211 PSPDHDRPGK 240
+PDH G+
Sbjct: 770 CNPDHVTTGR 779
>SB_9602| Best HMM Match : RVT_1 (HMM E-Value=1.6)
Length = 453
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 142 HSSTSPASRFMGTPSEDPSSFTDPSPDHDRPGKDTVDTQQRCQSR 276
H++ S S F G P + P S + +PGK T+++ +SR
Sbjct: 94 HNNKSNISFFSGQPMQGPMSRMNHPRGPLQPGKSTMESNNFAESR 138
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +1
Query: 31 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTD 210
S P PT P P +PY T +P ++T S F G E P D
Sbjct: 90 SYPASYPTSYPYPSPYPAPYPATYSAAPAAYPAAYVSSATTYDTSSFGGASCEVPPCSPD 149
Query: 211 PS 216
S
Sbjct: 150 MS 151
>SB_55199| Best HMM Match : PKD (HMM E-Value=0.75)
Length = 462
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 298 ANTRVGRVNLSLNIVHPXTVAPVSMLRHSAPNDQQLTHHDSKTSLASLQTENSTDDA 468
+NTR+ VNLS N P V+ ++ P+ LT ++++ SL N+ A
Sbjct: 173 SNTRLHTVNLSANNTRPHAVS--LSANNTRPHAVSLTANNTRPHAVSLSANNTRPHA 227
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 301 NTRVGRVNLSLNIVHPXTVAPVSMLRHSAPNDQQLTHHDSKTSLASLQTENSTDDA 468
NTR+ VNLS N P V+ ++ P+ LT ++++ SL N+ A
Sbjct: 270 NTRLHAVNLSANNTRPHAVS--LSANNTRPDAVSLTANNTRPHAVSLSANNTRPHA 323
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 76 TSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPS 198
+ SP+ G PR+++ +S+G+SS SP R + PS
Sbjct: 383 SGSPHRSGGKVFPRHKRTLSAGNSSMSPFRRSRTRTAHAPS 423
>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 121 EQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSPDHDRPGKDTV 249
E+L GH S +S GTP+ D S + P ++ PG D +
Sbjct: 71 ERLNRHGHKRGSTSSDTGGTPTNDASQ--NSPPRYEEPGYDDI 111
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +1
Query: 334 NIVHPXTVAPVSMLRHSAPNDQQLTHHDSKTSLASLQTENSTDDAY 471
NI H V P S L+HS H L ++QT D +
Sbjct: 390 NIPHHKPVTPTSPLKHSTSGPFSPPRHHGHGGLEAIQTSKHQQDQH 435
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 40 TRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPS 216
++ P P+P K S+ + S ++ L + S SP+ G+ D S +DP+
Sbjct: 460 SKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDLSCSSDPN 518
>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 4 VLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGG 105
+ D LG P PTP+P PR ++T G
Sbjct: 66 LFDKKLGKPGMVDMFPTPRPKPRGIPLDTFVTPG 99
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 106 KSPRYEQLVSSGHSSTSPASRFMGTPSEDPSSFTDPSP 219
++P+ E + ++ H STS +G P+ P+S PSP
Sbjct: 514 QTPQVESVATNAHVSTSS----VGQPTSTPASMLGPSP 547
>SB_14127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1185
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTP--SEDPSS 201
P P R P P P PRKT+S PR+ V P+ + + P S DP+
Sbjct: 700 PPLPVRSPRPTPLPRKTTSTPEKRPDVKPRH---VVGPERPPKPSRQVVERPDMSVDPAF 756
Query: 202 F 204
F
Sbjct: 757 F 757
>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +1
Query: 184 SEDPSSFTDPSPDHDRPGKDTVDTQQRCQSRDDPVRLMANTRVGRVNLSL 333
SE S +D PDHD+ D QS VR N R G+ SL
Sbjct: 205 SESDLSESDQEPDHDQFSSKEADYYMGRQSDQMRVRGKVNQRSGKPQQSL 254
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 94 LTGGKSPRYEQLVSSGHSSTSPA--SRFMGTPSEDPS 198
L G +PR+++ SSG S TSP S + T ++ P+
Sbjct: 20 LAKGPAPRWQRKASSGRSQTSPLRNSSRLNTSTKTPT 56
>SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8)
Length = 255
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 94 LTGGKSPRYEQLVSSGHSSTSPA--SRFMGTPSEDPS 198
L G +PR+++ SSG S TSP S + T ++ P+
Sbjct: 20 LAKGPAPRWQRKASSGRSQTSPLRNSSRLNTSTKTPT 56
>SB_23596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 830
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 283 PVRLMANTRVGRVNLSLNIVHPXTVAPVSMLRHSAPNDQQLTHHDSKTSLASLQTEN 453
P R A +G +N++ +V V ++LRH +DQ+ +H+D + + +N
Sbjct: 141 PERTCATITIGGINVAEALVSKGFV---TVLRHRQDDDQRSSHYDELLAAETRAVKN 194
>SB_22673| Best HMM Match : FixQ (HMM E-Value=7.6)
Length = 184
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 235 GKDTV--DTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAPVSMLR 378
GK T Q R +R D R+ NTR R+ + +V ++ PV++ R
Sbjct: 24 GKSTAFNTAQGRKPTRHDEARIKRNTRAKRILTPVVVVFGLSMLPVTVFR 73
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 28 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYE-QLVSSGHSSTSPASRFMGTPSEDPSSF 204
P+ P T +P P K GG+ + + +L +G ++ S + P+ PS+
Sbjct: 475 PAPPPCCMTLKPGPEKEIE--LQAGGQKYKLKVKLEKAGQAAPSAPAGLNQAPTSSPSAS 532
Query: 205 TDPSP 219
T+P+P
Sbjct: 533 TNPTP 537
>SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 139 GHSSTSPASRFMGT--PSEDPSSFTDPSPDHDRPGKDTVDTQQRCQSRDDP 285
GH +T + P DP++ T S + G DT+ + QSR P
Sbjct: 199 GHDTTPVTKQTWSRLYPDHDPNTVTTLSRSRPKHGHDTIPVTTQTQSRHYP 249
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 385 APNDQQLTHHDSKTSLASLQTENSTDDA 468
APND+++ T ++SLQT ST ++
Sbjct: 197 APNDRRVLKRSFSTDISSLQTPKSTRES 224
>SB_29067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 10 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMG-TPS 186
DSL G + PT P P P + + P T + ++ G SS+ P+S + PS
Sbjct: 38 DSLSG-EAGPTSEPEPTPRNLQPTPPALSTNSPRHGNRRPLTQGGSSSKPSSPAINKAPS 96
Query: 187 EDPSS 201
PS+
Sbjct: 97 TAPSN 101
>SB_23826| Best HMM Match : MFMR (HMM E-Value=7.3)
Length = 540
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 364 VSMLRHSAPNDQQLTHHDSKTSLASLQTENSTDD 465
+S S +D QLT H KT+ SLQ N T D
Sbjct: 461 ISSCGSSILDDSQLTIHVDKTTDGSLQWGNRTSD 494
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 31 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSEDPSS 201
S P P P PR TS + K+ R + HSST+ + G PS D ++
Sbjct: 1594 STPRGTPLGTPLPRTTSRSSSTSSVKAKRVVKKKRRSHSSTASSD---GKPSRDETT 1647
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 205 TDPSPDHDRPGKDTVDTQQRCQSRDDPVRLMANTRVGRVNLSLNIVHPXTVAP 363
T +P+ K TV+TQQ SRD + + +T+ + + + TV P
Sbjct: 371 TTTAPETTDASKTTVETQQTTYSRDPEISVTISTQPKKAP-GITVAPETTVVP 422
>SB_48866| Best HMM Match : Histone (HMM E-Value=5.29971e-42)
Length = 205
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 52 TPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPAS 165
TPQ R + TGGK+PR +QL + ++PA+
Sbjct: 66 TPQKMARTKQTARKSTGGKAPR-KQLATKAARKSAPAT 102
>SB_40034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 248 TVSFPGRSWSGLGSVKELGSSLGVPMNLDAGDVLL 144
TVSF + W G S K + G NL GD++L
Sbjct: 277 TVSFISKGWGGRASDKFITEHSGFLKNLLPGDLVL 311
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 10 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPASRFMGTPSE 189
D S P P+P+P P +G +P+ E + + S+T+ + +P++
Sbjct: 430 DEAKSTSSNSGNTPAPKPAPDAEDKPKSSSGTSTPK-EGVPKTIGSTTAADTTAQASPAQ 488
Query: 190 D---PSSFTDPSPDHDRPGKDTVDTQQRCQSRDDPVR 291
D S ++ K+ + +Q S +P +
Sbjct: 489 DVNRKSPVSEAEAPKPSAAKEEAEPEQMDTSEPEPAK 525
>SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10)
Length = 725
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3
Query: 420 GIVMRKLLVIRGGVPQHRDWCDGLRMHYVERKVHSADASVRHEPN-GIVAALASLLGINC 244
G++ +LL++ G R+W + R Y E + + V E +V SL G N
Sbjct: 183 GVIKVELLLLAGNSNMSRNWSEPWRQRYDEELLCRSTTRVGMEATLFLVINCLSLFG-NI 241
Query: 243 ILSWPIMVGTGVREGAWVLTRCAHEP*R 160
++ + I+ G+R + R P R
Sbjct: 242 LICFVIIQTNGLRRNTSLSLRYPPGPPR 269
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.126 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,603,105
Number of Sequences: 59808
Number of extensions: 398632
Number of successful extensions: 1344
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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