Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1269
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 517 SIFIVFYFLNLFWTSTNNL-RPKLAKSV-QPFSNFSETNEQQFIY 645
           S   + +F+ L+W  T+NL   KL  +  QP+    +++  Q+ +
Sbjct: 14  SFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTW 58


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 629 NSNSFIYSFIYIDFRNSEPRRSKNET 706
           N++ FI+  I++ FR ++  +  N+T
Sbjct: 142 NASLFIFDLIFLSFRCTKLCKEANKT 167


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 162  FTYLIKIPLLFYYGLCTYIIYLHMYTI 242
            F  +  +PLL ++GL   II   M+ +
Sbjct: 1318 FNEIYGVPLLLFFGLNFLIITQAMFLV 1344


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 159 LFTYLIKIPLLFYYGLCTYIIYLHMY 236
           +FT  +   L  YY  C  II L +Y
Sbjct: 274 IFTMHLLFLLCIYYFYCALIILLCIY 299


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 156 FLFTYLIKIPLLFYYGLCTY 215
           F+FT++  + +  Y+ LC +
Sbjct: 447 FIFTFITLLTIGLYFQLCEF 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,631
Number of Sequences: 336
Number of extensions: 3962
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)