Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1267
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.3  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 298 SSNGSNRGPISRHHDTQDEYPL*TFKNKQGRIKKHYKRVYSYTG 429
           S N +    + R+H +       + K+   RIK + K +Y  TG
Sbjct: 442 SQNRAKLSELLRYHTSASGDEACSLKDYVSRIKPNQKHIYYITG 485


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 509  WSADVYFY*NVEVSIHHWL 453
            +  DVY Y N   S+++W+
Sbjct: 2532 YPGDVYDYFNANFSLNYWI 2550


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 365 RPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNK 496
           +P   + EELK ++ + + T        +    + + +H  KNK
Sbjct: 53  KPCTPDGEELKRVLPDALKTSCAKCTDKQKQGAKTVIQHLYKNK 96


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 401 IIKEFIHTQDYNKAYSKLANGEWIP 475
           ++ EF+    +   Y    NGEW+P
Sbjct: 76  VLLEFVQIDPHRWKY---VNGEWVP 97


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 296 DLATALIVDPYLGITTHKMNIRYRP 370
           +++ + +VD  +  T   MN RY P
Sbjct: 2   NMSRSFLVDSLISNTPKDMNARYLP 26


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  VFRKLFIKILDIFVNSK*ICLIHVNN 107
           V +K    +  +FV S+  CL++ N+
Sbjct: 5   VVKKFLHSVRIVFVQSEIFCLVNFNH 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,467
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)