Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1267
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    24   5.4  
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    24   5.4  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    24   5.4  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.5  

>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 231 QGKTLIQQPFWIHK 190
           +G+TL  + FW+HK
Sbjct: 118 EGETLCDKAFWLHK 131


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 231 QGKTLIQQPFWIHK 190
           +G+TL  + FW+HK
Sbjct: 118 EGETLCDKAFWLHK 131


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 231 QGKTLIQQPFWIHK 190
           +G+TL  + FW+HK
Sbjct: 118 EGETLCDKAFWLHK 131


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +2

Query: 239 SAPQDEPMGMTPRELSEYDDLATALIVDPYLGITTHKMNIRY 364
           S P     G+T  ++ + D+    LI + +L +  + MN+R+
Sbjct: 29  SDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRW 70


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = +2

Query: 239 SAPQDEPMGMTPRELSEYDDLATALIVDPYLGITTHKMNIRY 364
           S P +   G+T +++ + D+    LI + +L +  +  N+R+
Sbjct: 46  SDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRW 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,562
Number of Sequences: 2352
Number of extensions: 15016
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)