Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1267
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069604-1|AAL39749.1|  782|Drosophila melanogaster LD36415p pro...   111   1e-24
AL031581-11|CAA20894.2| 1291|Drosophila melanogaster EG:115C2.10...   111   1e-24
AE014298-85|AAF45537.1| 1300|Drosophila melanogaster CG13363-PA ...   111   1e-24
AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA...    30   2.7  

>AY069604-1|AAL39749.1|  782|Drosophila melanogaster LD36415p
           protein.
          Length = 782

 Score =  111 bits (266), Expect = 1e-24
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = +2

Query: 263 GMTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKA 442
           GM+PRELSE DDLAT+LI+DP+LG  THKMNIR+RPLK + ++LK I+ +FIHTQ+Y+ A
Sbjct: 151 GMSPRELSENDDLATSLILDPHLGFQTHKMNIRFRPLKVDTQQLKAIVDDFIHTQNYDIA 210

Query: 443 YSKLANGEWIPRHFSKNKHQ 502
             ++  G WIPRH  KNK++
Sbjct: 211 IQRIYEGPWIPRHL-KNKNK 229



 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 39/61 (63%), Positives = 51/61 (83%)
 Frame = +1

Query: 508 QFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFKHERIDFLVGCIAEMT 687
           +  DHI RYLR+FDK +GF IE CYRY+LE + GAKISSTK++ K+++I+ LVGCIAE+T
Sbjct: 234 RLHDHIVRYLRVFDKDSGFAIEACYRYTLEEQRGAKISSTKRWSKNDKIECLVGCIAELT 293

Query: 688 E 690
           E
Sbjct: 294 E 294


>AL031581-11|CAA20894.2| 1291|Drosophila melanogaster EG:115C2.10
           protein.
          Length = 1291

 Score =  111 bits (266), Expect = 1e-24
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = +2

Query: 263 GMTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKA 442
           GM+PRELSE DDLAT+LI+DP+LG  THKMNIR+RPLK + ++LK I+ +FIHTQ+Y+ A
Sbjct: 151 GMSPRELSENDDLATSLILDPHLGFQTHKMNIRFRPLKVDTQQLKAIVDDFIHTQNYDIA 210

Query: 443 YSKLANGEWIPRHFSKNKHQ 502
             ++  G WIPRH  KNK++
Sbjct: 211 IQRIYEGPWIPRHL-KNKNK 229



 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 39/61 (63%), Positives = 51/61 (83%)
 Frame = +1

Query: 508 QFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFKHERIDFLVGCIAEMT 687
           +  DHI RYLR+FDK +GF IE CYRY+LE + GAKISSTK++ K+++I+ LVGCIAE+T
Sbjct: 234 RLHDHIVRYLRVFDKDSGFAIEACYRYTLEEQRGAKISSTKRWSKNDKIECLVGCIAELT 293

Query: 688 E 690
           E
Sbjct: 294 E 294


>AE014298-85|AAF45537.1| 1300|Drosophila melanogaster CG13363-PA
           protein.
          Length = 1300

 Score =  111 bits (266), Expect = 1e-24
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = +2

Query: 263 GMTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKA 442
           GM+PRELSE DDLAT+LI+DP+LG  THKMNIR+RPLK + ++LK I+ +FIHTQ+Y+ A
Sbjct: 151 GMSPRELSENDDLATSLILDPHLGFQTHKMNIRFRPLKVDTQQLKAIVDDFIHTQNYDIA 210

Query: 443 YSKLANGEWIPRHFSKNKHQ 502
             ++  G WIPRH  KNK++
Sbjct: 211 IQRIYEGPWIPRHL-KNKNK 229



 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 39/61 (63%), Positives = 51/61 (83%)
 Frame = +1

Query: 508 QFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFKHERIDFLVGCIAEMT 687
           +  DHI RYLR+FDK +GF IE CYRY+LE + GAKISSTK++ K+++I+ LVGCIAE+T
Sbjct: 234 RLHDHIVRYLRVFDKDSGFAIEACYRYTLEEQRGAKISSTKRWSKNDKIECLVGCIAELT 293

Query: 688 E 690
           E
Sbjct: 294 E 294


>AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA
           protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 511 FRDHIYRYLRIFDKKAGFVIEPCYRYSLE 597
           +R+H Y+ L+I+DK+   +I PC    LE
Sbjct: 215 YRNHFYQ-LKIYDKEGKLIIAPCLAVQLE 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,733,458
Number of Sequences: 53049
Number of extensions: 567200
Number of successful extensions: 1332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)