BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1267 (714 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.94 DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.2 DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.2 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.9 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.8 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.8 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.8 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.8 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.8 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.8 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.8 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.6 bits (51), Expect = 0.94 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 192 CVSRMVVGSASYPGRQVLHKMSRWV 266 CV+R + S+ R V+H RW+ Sbjct: 685 CVARNLAAEVSHTQRLVVHVPPRWI 709 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 24.2 bits (50), Expect = 1.2 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%) Frame = +2 Query: 179 KFYDLCIQN--GCWISVLPW 232 +F++L QN GCW S+LP+ Sbjct: 328 QFFNLIDQNAVGCWNSLLPY 347 >DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 510 Score = 23.4 bits (48), Expect = 2.2 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = -2 Query: 515 RNWSADVYFY*NVEVSIHHWLVLNKL 438 R W D YFY +H V NKL Sbjct: 116 RIWRPDTYFYNGKHSYVHTITVPNKL 141 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 23.0 bits (47), Expect = 2.9 Identities = 6/23 (26%), Positives = 14/23 (60%) Frame = -1 Query: 402 MFFNSSLFVFKGL*RIFILCVVM 334 +F+N+ ++ L +I C++M Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIM 359 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.6 bits (46), Expect = 3.8 Identities = 11/45 (24%), Positives = 22/45 (48%) Frame = -2 Query: 293 RIQTAREESYPSAHLVEHLPSRVRR*SNNHSGYTNHRIYVKFIFI 159 R + RE S ++ L ++ +NN++ Y N ++Y +I Sbjct: 290 RDRMERERS-KEPKIISSLSNKTIHNNNNYNNYNNKKLYYNINYI 333 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.4 bits (43), Expect = 8.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517 N YR E+L N ++F+ + K YS+ E S K+++TS E Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 292 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.4 bits (43), Expect = 8.8 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +2 Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514 N YR E+L N ++F+ + K YS+ E + KNK + + Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 292 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 193,142 Number of Sequences: 438 Number of extensions: 4072 Number of successful extensions: 25 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22048515 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -