Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1267
(714 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.94
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.8
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 192 CVSRMVVGSASYPGRQVLHKMSRWV 266
CV+R + S+ R V+H RW+
Sbjct: 685 CVARNLAAEVSHTQRLVVHVPPRWI 709
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = +2
Query: 179 KFYDLCIQN--GCWISVLPW 232
+F++L QN GCW S+LP+
Sbjct: 328 QFFNLIDQNAVGCWNSLLPY 347
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 515 RNWSADVYFY*NVEVSIHHWLVLNKL 438
R W D YFY +H V NKL
Sbjct: 116 RIWRPDTYFYNGKHSYVHTITVPNKL 141
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 2.9
Identities = 6/23 (26%), Positives = 14/23 (60%)
Frame = -1
Query: 402 MFFNSSLFVFKGL*RIFILCVVM 334
+F+N+ ++ L +I C++M
Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIM 359
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 293 RIQTAREESYPSAHLVEHLPSRVRR*SNNHSGYTNHRIYVKFIFI 159
R + RE S ++ L ++ +NN++ Y N ++Y +I
Sbjct: 290 RDRMERERS-KEPKIISSLSNKTIHNNNNYNNYNNKKLYYNINYI 333
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEW--IPRHFSKNKHQQTSFE 517
N YR E+L N ++F+ + K YS+ E S K+++TS E
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKE 65
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 59
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 292
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 353 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTSF 514
N YR E+L N ++F+ + K YS+ E + KNK + +
Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKY 292
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,142
Number of Sequences: 438
Number of extensions: 4072
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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