Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1265
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 358 YIPCI*RTHACILFIVK-LWFL 420
           Y P + + +AC+L +VK LW +
Sbjct: 39  YYPSLAKCYACLLMVVKILWVI 60


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 388 CILFIVKLWFLTSVVKLRLNI 450
           C+L++V L FLT  + L + +
Sbjct: 175 CVLYVVLLHFLTYNLSLGIKL 195


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 281 LLYILYKCGNFMLLRPRNFR 222
           LL I++  G F  L PR+ +
Sbjct: 5   LLQIMFTIGKFFALTPRSIK 24


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 446 ILFVFVNIFYSVTL 487
           ++F+FVN+F+ V +
Sbjct: 97  LIFIFVNVFFWVII 110


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 388 CILFIVKLWFLTSVVKLRLNI 450
           C+L++V L FLT  + L + +
Sbjct: 175 CVLYVVLLHFLTYNLSLGIKL 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,409
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)