Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1264
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    31   0.007
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    31   0.007
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.59 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.78 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 324 FNIYCCHTLRN*KVFSKKVTLYVPLKYL 241
           +NIY C T+ N + F +K+ L + L YL
Sbjct: 195 YNIYVCQTVSNFEYFQRKILLMIQLYYL 222


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 324 FNIYCCHTLRN*KVFSKKVTLYVPLKYL 241
           +NIY C T+ N + F +K+ L + L YL
Sbjct: 121 YNIYVCQTVSNFEYFQRKILLMIQLYYL 148


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 450 YRPGCAAIESVSSFLDG 400
           Y PGCA ++S S+ L G
Sbjct: 382 YLPGCAMVDSCSNILTG 398


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = -3

Query: 428 LKVSRAFWTASAADIV--FC--LDVVRFPTVILNFEIPCLIFIVATP 300
           LK + A   A+AA+ V  FC  LD     ++I+N  +PC+  +VA P
Sbjct: 293 LKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILPCVKELVADP 339


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 402 GLSS*HRLLFGCCKIPDCHLEF 337
           G+++ H   FG    PDC +EF
Sbjct: 346 GMAAPHHQNFGPRHPPDCSMEF 367


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 45  SVRNHCLIHSLYTLCKQLMYISAC 116
           SV    +I+  YTL K +++ S C
Sbjct: 162 SVHEASIINFGYTLAKFMIFTSTC 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,306
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)