Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1262
         (819 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   2.8  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   4.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   6.5  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.6  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 463 LAEEVLQA*AIISNSIMLLFTSLVPVCMI 377
           LA  V++A   IS+  + +  S+VP+C+I
Sbjct: 789 LAMRVVRAYKTISHVAVCVIASMVPICLI 817


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +2

Query: 530 IVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQY 673
           I S++ A +  +     I T+  H   +  FFDCP   +       QY
Sbjct: 148 ISSEMSAALGVEIFSDQITTVKTHYGTLVAFFDCPAITVTDQALARQY 195


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 400 SLVPVCMI*IFLPRIESAISTMVSLLVLW 314
           SL+  CM+ + L  I   +  +++L+ LW
Sbjct: 56  SLMTPCMVIVMLSYIFGCVGNLMALIHLW 84


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 23  WFFQIKYLTA*TFNCLLNKLFSTFTNII 106
           WF  +   T   + CL N    TF N I
Sbjct: 136 WFNMVNETTCMNYECLRNDANETFINSI 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,630
Number of Sequences: 2352
Number of extensions: 18028
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)