Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1260
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 470 RRLCLKILNLAITFL*VWLKIENYNKL 390
           RR  L + N  ITFL V ++  +Y KL
Sbjct: 316 RRTILGVSNAVITFLIVMVQKASYEKL 342



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 470 RRLCLKILNLAITFL*VWLKIEN 402
           R+  L +LN   TFL V ++ EN
Sbjct: 497 RKTILGVLNALFTFLIVVVQFEN 519


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 479 LIPESKGYHLNVTS*FKLVY 538
           L+PE + YHL +   + ++Y
Sbjct: 315 LVPEEQVYHLEIEKYYNILY 334


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 731 VYAFRMNFKIKDVTRTWSSRVLSVRPEGRIPSSNTRLSWQ--CVTSSALTQNIRV 573
           V   R  F I +    + ++ L ++PEGRI +    +S+   C     L++++++
Sbjct: 185 VVMLRSRFAILNKQIRFLNQYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKL 239


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 731 VYAFRMNFKIKDVTRTWSSRVLSVRPEGRIPSSNTRLSWQ--CVTSSALTQNIRV 573
           V   R  F I +    + ++ L ++PEGRI +    +S+   C     L++++++
Sbjct: 203 VVMLRSRFAILNKQIRFLNQYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKL 257


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 473 FRRLCLKILNLAITFL*VWLKIENYNKLIYFL 378
           F+ L L+ +NL ITF  +W     YN L   L
Sbjct: 209 FKALVLQTINLQITF--IW----TYNDLFVML 234


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 473 FRRLCLKILNLAITFL*VWLKIENYNKLIYFL 378
           F+ L L+ +NL ITF  +W     YN L   L
Sbjct: 209 FKALVLQTINLQITF--IW----TYNDLFVML 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,320
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)