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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1260
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    25   1.0  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   3.1  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   4.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   7.2  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   7.2  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   7.2  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   7.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   7.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.5  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 143 KIVFNNRTKLYTELYTQIIYRNYNNMISINYSRI 244
           KI+ NN +      Y    Y NYNN  + NY ++
Sbjct: 80  KIISNNNSLSNNYNYNNN-YNNYNNNYNTNYKKL 112


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 598 ELVTHCHDNRVLEEGILPSGRTLST 672
           E V HCH N V+   + P    L++
Sbjct: 20  ESVHHCHHNGVVHRDLKPENLLLAS 44


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 94  YNNYNNNYNTNYKKL 108


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
           K+ + L     Y NYNN  + NY+
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYN 103


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
           K+ + L     Y NYNN  + NY+
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYN 103


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
           K+ + L     Y NYNN  + NY+
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYN 103


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
           K+ + L     Y NYNN  + NY+
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYN 103


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 200 YRNYNNMISINYSRI 244
           Y NYNN  + NY ++
Sbjct: 337 YNNYNNNYNNNYKKL 351


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 80  ILFVLNNIFLKCSLG 124
           +LF+ N +F  C LG
Sbjct: 11  LLFIFNFVFAVCGLG 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,484
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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