Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1260
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 1.0
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 3.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.2
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.5
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 143 KIVFNNRTKLYTELYTQIIYRNYNNMISINYSRI 244
KI+ NN + Y Y NYNN + NY ++
Sbjct: 80 KIISNNNSLSNNYNYNNN-YNNYNNNYNTNYKKL 112
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 598 ELVTHCHDNRVLEEGILPSGRTLST 672
E V HCH N V+ + P L++
Sbjct: 20 ESVHHCHHNGVVHRDLKPENLLLAS 44
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 94 YNNYNNNYNTNYKKL 108
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
K+ + L Y NYNN + NY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYN 103
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
K+ + L Y NYNN + NY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYN 103
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
K+ + L Y NYNN + NY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYN 103
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 167 KLYTELYTQIIYRNYNNMISINYS 238
K+ + L Y NYNN + NY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYN 103
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 200 YRNYNNMISINYSRI 244
Y NYNN + NY ++
Sbjct: 337 YNNYNNNYNNNYKKL 351
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 80 ILFVLNNIFLKCSLG 124
+LF+ N +F C LG
Sbjct: 11 LLFIFNFVFAVCGLG 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,484
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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