Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1254
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.18 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.94 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 763 YYYYHHIF*KLHFF*AIPDLVLILDLGLFFSQFVICINLYKFPRFFL 623
           Y+YY H+     F      L+ +L +  F+   +I + +Y F R F+
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFI 306


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = -1

Query: 782 QRPYKFILLLSSYILKVTLFLGDSRFSFDFGLGSIFFSICNLY*PLQIS*VFSFLKCRLF 603
           Q P   + L     L VT ++  +    D    +I   +C+LY  LQI+ + ++      
Sbjct: 129 QAPVLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYYILQITLIVNY----AL 184

Query: 602 VSQNHF*KRLEFYNKI*KYVTYYGPL 525
             +N F K L+ Y KI     Y G L
Sbjct: 185 ALKNRF-KELQKYLKIETSCRYVGTL 209


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 369 FICYCRFTFH*LMSLNINMH 428
           ++ +C F FH ++ +N+ +H
Sbjct: 667 WLFHCHFLFHIVIGMNLIIH 686


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 LFKFEFTEIRLCIYLPHLF 245
           L    FT +++ +YL H+F
Sbjct: 204 LLLITFTSLQIMVYLQHIF 222


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 513 FGLMKLAIFIKSKLAFALEVYEFSNNCVSAY*YLMTLI 400
           FG++ L +F  S +   + ++ F+ N  +   Y M+L+
Sbjct: 523 FGIVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLL 560


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 LFKFEFTEIRLCIYLPHLF 245
           L    FT +++ +YL H+F
Sbjct: 204 LLLITFTSLQIMVYLQHIF 222


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 LFKFEFTEIRLCIYLPHLF 245
           L    FT +++ +YL H+F
Sbjct: 524 LLLITFTSLQIMVYLQHIF 542


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 513 FGLMKLAIFIKSKLAFALEVYEFSNNCVSAY*YLMTLI 400
           FG++ L +F  S +   + ++ F+ N  +   Y M+L+
Sbjct: 248 FGIVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLL 285


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 245 FQPFFCPRFLRYRERFYAVIVNRAMTPPF*FTGF 144
           F   FC     Y+     +++N+ +TP F F  F
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQLITPLFFFHSF 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,569
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)