Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1253
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.76 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   1.3  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   4.1  
DQ980209-1|ABL09377.1|  504|Anopheles gambiae catalase protein.        23   9.4  
DQ980208-1|ABL09376.1|  504|Anopheles gambiae catalase protein.        23   9.4  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +2

Query: 164 PALESKISTFQIKDLSRK-EKTRVKEGQVYLPKNFQIDLQKTQKRSGNGITSGDIKKLEE 340
           P   S+IST  +  +  K + + +K   + +P   Q+  +     +  G ++GD  +  +
Sbjct: 218 PESVSRISTGPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPTIATGGASTGDAAEEID 277

Query: 341 AGYHTVESVAYAPKNG*SQLKGYLKRRQ 424
              HTVE +A A       +K  ++ RQ
Sbjct: 278 LMGHTVEELAAAANVSVEVIKEAIRVRQ 305


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +2

Query: 164 PALESKISTFQIKDLSRK-EKTRVKEGQVYLPKNFQIDLQKTQKRSGNGITSGDIKKLEE 340
           P   S+IST  +  +  K + + +K   + +P   Q+  +     +    T+GD  +  +
Sbjct: 211 PESVSRISTGPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPTIATGSATTGDAAEEID 270

Query: 341 AGYHTVESVAYAPKNG*SQLKGYLKRRQ 424
              HTVE +A A       +K  ++ RQ
Sbjct: 271 LMGHTVEELAAAANVSVEVIKEAIRVRQ 298


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 307 AIARTFLCLLEIYLKILRQINLTL 236
           A+ R F CLLE+ L+ + Q+ + L
Sbjct: 227 ALLRIFECLLEVTLQKILQLTIVL 250


>DQ980209-1|ABL09377.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 397 IKGISEAKADKILAEASKLVPMGFTTATE 483
           +    +A+ DK+ A  S   P+G  TA+E
Sbjct: 10  LNAYKDAQKDKVTATMSHGAPVGTKTASE 38


>DQ980208-1|ABL09376.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 397 IKGISEAKADKILAEASKLVPMGFTTATE 483
           +    +A+ DK+ A  S   P+G  TA+E
Sbjct: 10  LNAYKDAQKDKVTATMSHGAPVGTKTASE 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,620
Number of Sequences: 2352
Number of extensions: 13187
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)