Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1253
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 81 5e-15
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 81 5e-15
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 81 5e-15
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 81 5e-15
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 81 5e-15
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 81 5e-15
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 81 5e-15
BC001459-1|AAH01459.1| 242|Homo sapiens RAD51 homolog (RecA hom... 51 5e-06
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 51 5e-06
AF203691-1|AAF61901.1| 75|Homo sapiens RAD51 protein. 51 5e-06
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 45 2e-04
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 45 2e-04
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 45 2e-04
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 45 2e-04
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 45 2e-04
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 45 2e-04
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 45 2e-04
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 45 2e-04
AY425955-1|AAR07948.1| 64|Homo sapiens Rad51 protein. 37 0.081
AY608888-1|AAT37157.1| 42|Homo sapiens truncated RAD51 protein. 36 0.11
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 37.5 bits (83), Expect = 0.046
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEGKA 157
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 80.6 bits (190), Expect = 5e-15
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEINNLLLVQRN*IDYWEXX 558
KK LI IKGISEAKADKILAEA+KLVPMGFTTATEFHQ+R+EI + + +
Sbjct: 57 KKELINIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGG 116
Query: 559 XXXXXXXXXXXXXXXA-NPIMSPLAVTCQLPLN 654
I LAVTCQLP++
Sbjct: 117 IETGSITEMFGEFRTGKTQICHTLAVTCQLPID 149
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKPNYV-TLSSHLPATIEQSGGEGNA 677
Q+TTGSKELD+LL FRTGK TL+ I++ GGEG A
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKA 157
>BC001459-1|AAH01459.1| 242|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 242
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 37.5 bits (83), Expect = 0.046
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEASK 450
KK LI IKGISEAKADKILA A +
Sbjct: 57 KKELINIKGISEAKADKILAVAER 80
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 36.7 bits (81), Expect = 0.081
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEA 444
KK LI IKGISEAKADKIL E+
Sbjct: 57 KKELINIKGISEAKADKILTES 78
>AF203691-1|AAF61901.1| 75|Homo sapiens RAD51 protein.
Length = 75
Score = 50.8 bits (116), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 305 GITSGDIKKLEEAGYHTVESVAYAPKNG*SQLKG 406
GI + D+KKLEEAG+HTVE+VAYAPK +KG
Sbjct: 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKG 65
Score = 34.3 bits (75), Expect = 0.43
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKIL 435
KK LI IKGISEAKADKIL
Sbjct: 57 KKELINIKGISEAKADKIL 75
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 370 LCSKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKR 498
+ +++ L +KG+SEAK DKI A+KL+ GF TA E+ +KR
Sbjct: 53 MTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKR 95
>AY425955-1|AAR07948.1| 64|Homo sapiens Rad51 protein.
Length = 64
Score = 36.7 bits (81), Expect = 0.081
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAEA 444
KK LI IKGISEAKADKIL E+
Sbjct: 5 KKELINIKGISEAKADKILTES 26
>AY608888-1|AAT37157.1| 42|Homo sapiens truncated RAD51 protein.
Length = 42
Score = 36.3 bits (80), Expect = 0.11
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 379 KKWLITIKGISEAKADKILAE 441
KK LI IKGISEAKADKIL E
Sbjct: 1 KKELINIKGISEAKADKILVE 21
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,579,870
Number of Sequences: 237096
Number of extensions: 1775223
Number of successful extensions: 2678
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2671
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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