Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1252
(787 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 129 7e-29
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 122 8e-27
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 114 3e-24
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 103 4e-21
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 102 9e-21
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 101 3e-20
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 99 1e-19
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 90 7e-17
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 89 9e-17
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 83 1e-14
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 69 2e-10
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 67 4e-10
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 61 3e-08
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 59 1e-07
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 3e-07
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 57 4e-07
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 57 4e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 56 8e-07
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 56 1e-06
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 55 2e-06
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 2e-06
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 55 2e-06
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 54 4e-06
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 54 5e-06
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 54 5e-06
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 53 7e-06
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 53 9e-06
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 53 9e-06
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 53 9e-06
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 52 1e-05
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 52 1e-05
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 52 1e-05
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 1e-05
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 52 2e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 52 2e-05
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 3e-05
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 51 3e-05
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 51 3e-05
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 51 4e-05
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 51 4e-05
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 50 5e-05
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 50 5e-05
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 50 5e-05
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 50 7e-05
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 50 7e-05
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 50 7e-05
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 50 9e-05
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 49 1e-04
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 49 2e-04
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 49 2e-04
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 49 2e-04
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 49 2e-04
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 49 2e-04
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 49 2e-04
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 48 2e-04
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 48 2e-04
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 48 2e-04
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 48 3e-04
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 48 3e-04
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 48 4e-04
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 48 4e-04
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 48 4e-04
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 47 5e-04
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 47 5e-04
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 47 5e-04
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 47 5e-04
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 47 5e-04
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 47 5e-04
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 47 6e-04
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 47 6e-04
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 47 6e-04
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 47 6e-04
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 47 6e-04
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 47 6e-04
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 47 6e-04
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 8e-04
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 46 8e-04
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 8e-04
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 46 8e-04
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 46 8e-04
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 46 0.001
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 46 0.001
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 46 0.001
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 46 0.001
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 46 0.001
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 46 0.001
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 0.001
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 46 0.001
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 46 0.001
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 46 0.001
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 46 0.001
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 45 0.002
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 45 0.002
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 45 0.002
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 45 0.002
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 45 0.002
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 45 0.002
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 44 0.003
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.003
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 44 0.003
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 44 0.003
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 44 0.003
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 44 0.003
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.003
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 44 0.003
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 44 0.004
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.004
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.004
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 44 0.004
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 44 0.004
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 44 0.004
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 44 0.004
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 44 0.004
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 44 0.004
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.006
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.006
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 44 0.006
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.006
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 44 0.006
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 44 0.006
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 44 0.006
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.006
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 44 0.006
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 43 0.008
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 43 0.008
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 43 0.008
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 43 0.008
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 43 0.008
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 43 0.008
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.008
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.008
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.008
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 43 0.008
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 43 0.010
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 43 0.010
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.010
UniRef50_Q4Q0X4 Cluster: ATP-dependent RNA helicase-like protein... 43 0.010
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 43 0.010
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 43 0.010
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 43 0.010
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 43 0.010
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 43 0.010
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 42 0.013
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 42 0.013
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.013
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 42 0.013
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 42 0.013
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.013
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 42 0.013
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 42 0.013
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 42 0.013
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 42 0.013
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 42 0.018
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 42 0.018
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.018
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.018
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 42 0.018
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 42 0.018
UniRef50_A3H8H5 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 42 0.018
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 42 0.018
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 42 0.018
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 42 0.018
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.018
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 42 0.018
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 42 0.018
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 42 0.018
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 42 0.023
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 42 0.023
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 42 0.023
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 42 0.023
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 42 0.023
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 42 0.023
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 42 0.023
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.023
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 42 0.023
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 42 0.023
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 42 0.023
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 42 0.023
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.023
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 42 0.023
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 41 0.031
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 41 0.031
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 41 0.031
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 41 0.031
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 41 0.031
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 41 0.031
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 41 0.031
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 41 0.031
UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain co... 41 0.031
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 41 0.031
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 41 0.031
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 41 0.040
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 41 0.040
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 41 0.040
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 41 0.040
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 41 0.040
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.040
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 41 0.040
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 41 0.040
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.040
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 41 0.040
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 41 0.040
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 41 0.040
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 41 0.040
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 41 0.040
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 41 0.040
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 41 0.040
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 41 0.040
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 41 0.040
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 40 0.053
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 40 0.053
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 40 0.053
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 40 0.053
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 40 0.053
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 40 0.053
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.053
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 40 0.053
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.053
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 40 0.053
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.053
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 40 0.053
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 40 0.071
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.071
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 40 0.071
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 40 0.071
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 40 0.071
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 40 0.071
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 40 0.071
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 40 0.071
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.071
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.071
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 40 0.071
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 40 0.071
UniRef50_A7APA3 Cluster: DEAD/DEAH box helicase domain containin... 40 0.071
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 40 0.071
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 40 0.071
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 40 0.071
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 40 0.071
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 40 0.071
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.071
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 40 0.093
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 40 0.093
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.093
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 40 0.093
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 40 0.093
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.093
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 40 0.093
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 40 0.093
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 40 0.093
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 40 0.093
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 40 0.093
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 40 0.093
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 40 0.093
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 39 0.12
UniRef50_Q6DDL4 Cluster: LOC398446 protein; n=4; Tetrapoda|Rep: ... 39 0.12
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 39 0.12
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 39 0.12
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 39 0.12
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 39 0.12
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.12
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 39 0.12
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 39 0.12
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.12
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 39 0.12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 39 0.16
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 39 0.16
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 39 0.16
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 39 0.16
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 39 0.16
UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 39 0.16
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.16
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 39 0.16
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 39 0.16
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 39 0.16
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 39 0.16
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 39 0.16
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 38 0.22
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 38 0.22
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 38 0.22
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 38 0.22
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 38 0.22
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 38 0.22
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 38 0.22
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 38 0.22
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.22
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 38 0.22
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 38 0.22
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 38 0.22
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 38 0.22
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 38 0.29
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 38 0.29
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 38 0.29
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 38 0.29
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 38 0.29
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.29
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 38 0.29
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.29
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 38 0.29
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.29
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 38 0.29
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 38 0.29
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 38 0.29
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 38 0.29
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 38 0.29
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 38 0.29
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 38 0.29
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 38 0.38
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 38 0.38
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 38 0.38
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 38 0.38
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 38 0.38
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 38 0.38
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 38 0.38
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 38 0.38
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.38
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 38 0.38
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 38 0.38
UniRef50_A0BX42 Cluster: Chromosome undetermined scaffold_133, w... 38 0.38
UniRef50_Q4PGW1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 38 0.38
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 38 0.38
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 37 0.50
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 37 0.50
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 37 0.50
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 37 0.50
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 37 0.50
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 37 0.50
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 37 0.50
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 37 0.50
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 37 0.50
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 37 0.50
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 37 0.50
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 37 0.50
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 37 0.50
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.50
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 37 0.50
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 37 0.50
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 37 0.50
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 37 0.66
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 37 0.66
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 37 0.66
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 37 0.66
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 37 0.66
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 37 0.66
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 37 0.66
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 37 0.66
UniRef50_Q5BVP1 Cluster: SJCHGC07759 protein; n=1; Schistosoma j... 37 0.66
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 37 0.66
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 37 0.66
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 37 0.66
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 37 0.66
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 36 0.87
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.87
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 36 0.87
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 36 0.87
UniRef50_Q4XXT1 Cluster: ATP-dependent RNA helicase, putative; n... 36 0.87
UniRef50_Q4UIB5 Cluster: DEAD-box family (RNA) helicase, putativ... 36 0.87
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 36 0.87
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 36 0.87
UniRef50_A5KCF7 Cluster: ATP-dependent RNA helicase, putative; n... 36 0.87
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 36 0.87
UniRef50_A0CLP7 Cluster: Chromosome undetermined scaffold_20, wh... 36 0.87
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 36 0.87
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 36 0.87
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 36 0.87
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 36 0.87
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 36 1.2
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 36 1.2
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 36 1.2
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 36 1.2
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 36 1.2
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 36 1.2
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.2
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 36 1.2
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 36 1.2
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 36 1.2
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 36 1.2
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 36 1.2
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 36 1.2
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 36 1.2
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 36 1.2
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 36 1.5
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 36 1.5
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 36 1.5
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 36 1.5
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 36 1.5
UniRef50_A7SD94 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.5
UniRef50_A4V6L4 Cluster: DEAD/H box protein; n=1; Dugesia japoni... 36 1.5
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 36 1.5
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 36 1.5
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 35 2.0
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 35 2.0
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 35 2.0
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.0
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 35 2.0
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 35 2.0
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 35 2.0
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 35 2.0
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 35 2.0
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 35 2.0
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 35 2.0
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 35 2.0
UniRef50_O13622 Cluster: ATP-dependent RNA helicase mss116, mito... 35 2.0
UniRef50_UPI00006CA6E2 Cluster: Type III restriction enzyme, res... 35 2.7
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 35 2.7
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 35 2.7
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.7
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 35 2.7
UniRef50_Q98SB0 Cluster: Putative helicase; n=1; Guillardia thet... 35 2.7
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 35 2.7
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 35 2.7
UniRef50_Q7RIP4 Cluster: DEAD/DEAH box helicase, putative; n=3; ... 35 2.7
UniRef50_Q5CL10 Cluster: DEAD/H (Asp-Glu-Ala-Asp/His) box polype... 35 2.7
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 35 2.7
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.7
UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 35 2.7
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 35 2.7
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 35 2.7
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 35 2.7
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 35 2.7
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 35 2.7
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 35 2.7
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 35 2.7
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 34 3.5
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 34 3.5
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 34 3.5
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 3.5
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 34 3.5
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 34 3.5
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 34 3.5
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 34 3.5
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 34 4.6
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 34 4.6
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 34 4.6
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 34 4.6
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 34 4.6
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 34 4.6
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 34 4.6
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 34 4.6
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 34 4.6
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 34 4.6
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 34 4.6
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 34 4.6
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 34 4.6
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 34 4.6
UniRef50_A3CUY2 Cluster: DEAD/DEAH box helicase domain protein; ... 34 4.6
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 34 4.6
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 34 4.6
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 34 4.6
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 34 4.6
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 33 6.1
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 33 6.1
UniRef50_A6PQA1 Cluster: Putative uncharacterized protein precur... 33 6.1
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_Q5BYM5 Cluster: SJCHGC04154 protein; n=1; Schistosoma j... 33 6.1
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 33 6.1
UniRef50_Q871B4 Cluster: Putative uncharacterized protein B8G12.... 33 6.1
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 33 6.1
UniRef50_Q502G7 Cluster: LOC553462 protein; n=3; Danio rerio|Rep... 33 8.1
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 33 8.1
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 33 8.1
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 33 8.1
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 33 8.1
UniRef50_A3XK74 Cluster: Beta-N-acetylhexosaminidase; n=1; Leeuw... 33 8.1
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 33 8.1
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 33 8.1
UniRef50_Q015D2 Cluster: DEAD/DEAH box helicase family protein /... 33 8.1
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 33 8.1
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 33 8.1
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 33 8.1
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 33 8.1
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 33 8.1
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 33 8.1
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 33 8.1
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 33 8.1
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 129 bits (312), Expect = 7e-29
Identities = 62/85 (72%), Positives = 70/85 (82%)
Frame = +2
Query: 254 LMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQET 433
L K+I Q LVES +E+ +KDP+SPLYSVKTFE L LK LLKG+YAMGFN PSKIQE
Sbjct: 67 LNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEM 126
Query: 434 ALPTLLADPPQNMIAQSQSGTGKTA 508
ALP +LA PPQN+IAQSQSGTGKTA
Sbjct: 127 ALPMMLAHPPQNLIAQSQSGTGKTA 151
Score = 110 bits (265), Expect = 3e-23
Identities = 47/88 (53%), Positives = 66/88 (75%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FVLAMLSRV++ + +PQ LCL+PTYELA+QTG V +M KFC ++++ YA+RG +
Sbjct: 149 KTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRI 208
Query: 679 PRGSKITDHILIGTPGKMFDWGVKFGML 762
PRG+ IT I+IGTPG + DW K ++
Sbjct: 209 PRGTDITKQIIIGTPGTVLDWCFKLKLI 236
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 122 bits (295), Expect = 8e-27
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +2
Query: 254 LMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQET 433
L K+IR LV S +E+ ++DP+SPLYSVK+FE L LKP LLKGVY MGFN PS+IQE
Sbjct: 8 LNKLIRHSLVHSSNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQEN 67
Query: 434 ALPTLLADPPQNMIAQSQSGTGKTA 508
ALP ++A P QN+IAQSQSGTGKTA
Sbjct: 68 ALPLMMAQPAQNLIAQSQSGTGKTA 92
Score = 98.7 bits (235), Expect = 1e-19
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F LAML V+ +PQ LC++PTYELA+Q G+V +M +FC +++L YAVRG +
Sbjct: 90 KTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADVRLVYAVRGNRI 149
Query: 679 PRGSKITDHILIGTPGKMFDWGVK 750
RG+K+ + I++GTPG ++DW K
Sbjct: 150 VRGTKVQEQIVVGTPGTVYDWCAK 173
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 114 bits (274), Expect = 3e-24
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 272 QGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLL 451
+GL E + ++IQ+ DPNSPLYSVKTFE L LKP LLKGVYAMG+N PSKIQE ALP ++
Sbjct: 46 EGLDEFGIQLDIQQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALP-II 104
Query: 452 ADPPQNMIAQSQSGTGKTA 508
P N+IAQSQSGTGKTA
Sbjct: 105 IQSPNNLIAQSQSGTGKTA 123
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L ML+ VD + N PQ +C+SPT ELA+QT EV +K+ +F IK + E+
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQF-SNIKPLLYISEIEV 179
Query: 679 PRGSKITDHILIGTPGKMFDWGVK 750
P+ +T+ ++IGTPGK+ + +K
Sbjct: 180 PK--NVTNQVIIGTPGKILENVIK 201
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 103 bits (248), Expect = 4e-21
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = +2
Query: 278 LVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPT 445
L+ S+ +++++ + DPNSPLYS K+F+ L L P LLKG+YAM F PSKIQE ALP
Sbjct: 66 LISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPL 125
Query: 446 LLADPPQNMIAQSQSGTGKTA 508
LL +PP+NMIAQSQSGTGKTA
Sbjct: 126 LLHNPPRNMIAQSQSGTGKTA 146
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L ML+RV+ PQ +CL+P+ ELA QT EV +M KF +I + V +
Sbjct: 144 KTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF-TKITSQLIV-PDSF 201
Query: 679 PRGSKITDHILIGTPGKMFD 738
+ +I +++GTPG + D
Sbjct: 202 EKNKQINAQVIVGTPGTVLD 221
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 102 bits (245), Expect = 9e-21
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Frame = +2
Query: 260 KIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETA 436
K++ L E+ LD E+ R DP+ PL+SV+TF+ L+LK LLKG+ AMGF PS IQE A
Sbjct: 47 KLLNSKLFETHDLDFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAAMGFYKPSTIQERA 106
Query: 437 LPTLLADPPQNMIAQSQSGTGKTAPLF*RC*AELTLTRIILKYC 568
L +L++D PQNMIAQSQSGTGKTA A L+ R + YC
Sbjct: 107 LSSLISDNPQNMIAQSQSGTGKTATFL---LAMLSRIRTDVHYC 147
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K +F+LAMLSR+ ++ +Y Q LC++PT ELA+Q V +MA+F ++ AVR
Sbjct: 128 KTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESVGRQMAQFMTDVSFATAVR 183
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 101 bits (241), Expect = 3e-20
Identities = 50/141 (35%), Positives = 83/141 (58%)
Frame = +2
Query: 299 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 478
+++QR+DP SPLYS+ +F L LKP +LK + M F P++IQETALP LL +PP N+IA
Sbjct: 603 VDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIA 662
Query: 479 QSQSGTGKTAPLF*RC*AELTLTRIILKYCVLVPHMN*PYKLVKLLQKWQNFVLK*S*SM 658
Q+QSGTGKTA + + + + L P + ++ ++++K F+
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHY 722
Query: 659 PLEGKNFPGVQKSQITFLLVL 721
++G N ++ ++T +V+
Sbjct: 723 AIKGGNMAAMRGRKLTEQIVI 743
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FVL ML R+D N PQ +CL+PT ELA Q GEV KM KF +K+ YA++G +
Sbjct: 670 KTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
Query: 679 P--RGSKITDHILIGTPGKMFDWGVKF 753
RG K+T+ I+IGTPG D+ K+
Sbjct: 730 AAMRGRKLTEQIVIGTPGITRDYLQKY 756
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Frame = +2
Query: 272 QGLVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 439
+GL+ + +E++ + DPNSPLYSV++F+ L+L +L+KG+ A GF PSKIQE AL
Sbjct: 120 EGLITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
Query: 440 PTLLADPPQNMIAQSQSGTGKTA 508
P LL++PP+N+I QSQSGTGKTA
Sbjct: 180 PLLLSNPPRNLIGQSQSGTGKTA 202
Score = 56.8 bits (131), Expect = 6e-07
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L MLSRVD PQ +C++P+ ELA Q EV ++ +F ++ A+ G
Sbjct: 200 KTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQF-TQVGTFLAIPG-SW 257
Query: 679 PRGSKITDHILIGTPGKMFD 738
R S+I ILIGTPG + D
Sbjct: 258 SRNSRIDKQILIGTPGTLVD 277
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 89.8 bits (213), Expect = 7e-17
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 IRQGLVESKLDIEIQRKDPNS-PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 442
+R+ LVE+ I + K N+ PLYSVK+FE L LK LL G+ +MGF PS IQE ALP
Sbjct: 22 LRKTLVETD-PINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALP 80
Query: 443 TLLADPPQNMIAQSQSGTGKTA 508
LL + P+N+IAQSQSGTGKTA
Sbjct: 81 MLLENQPKNLIAQSQSGTGKTA 102
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--E 672
K +F+L MLS++D N + Q LC++PT EL Q EVA M+KF +K+ A++G
Sbjct: 100 KTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKGLSP 159
Query: 673 ELPRGSKITDHILIGTPGKMFDWGVKFGMLY 765
++ G +I I+IGTPG + W LY
Sbjct: 160 DILEG-QINSQIIIGTPGTLKFWTTDNSSLY 189
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 89.4 bits (212), Expect = 9e-17
Identities = 44/79 (55%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 275 GLVESKLDIEIQRKDPN--SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 448
GL ES D+E+Q DP+ SPL S+ +F L L ++ G+ AM F PSKIQ ALP +
Sbjct: 71 GLQESNYDVEVQLGDPDTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLM 130
Query: 449 LADPPQNMIAQSQSGTGKT 505
L++PP+NMIAQSQSGTGKT
Sbjct: 131 LSNPPRNMIAQSQSGTGKT 149
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNK-NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 675
K +FV+ +LSRVD N+ N PQ L L+P+ ELA Q V + +FC + + A+ G
Sbjct: 148 KTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPG-A 206
Query: 676 LPRGSKITDHILIGTPGKMFD 738
+ R + + ++++GTPG + D
Sbjct: 207 ISRETGVKANVVVGTPGTVMD 227
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 281 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 460
V++ I +Q DP + LYS K + L+L P+LLKG+Y GFN PSKIQ ALP L+ +
Sbjct: 91 VQNNSSISVQTVDPKAQLYSAKDWSDLNLSPDLLKGIYNKGFNRPSKIQAAALP-LILNS 149
Query: 461 PQNMIAQSQSGTGKTA 508
P N+IAQ+ +G+GKTA
Sbjct: 150 PMNLIAQAHNGSGKTA 165
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F LAML +VD+ +PQ +CL PT ELA Q +V ++ KF +G++
Sbjct: 163 KTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVVAQGDKY 222
Query: 679 PRGSKITDHILIGTPGKMFDW 741
+ I I+I TPGKM D+
Sbjct: 223 DK--TIGSQIIICTPGKMQDF 241
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF---CPEIKLKYAVRG 669
K FVL MLSRVD PQ LC+ PT ELA Q EV KM KF E+ + + RG
Sbjct: 144 KTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRG 203
Query: 670 -EELPRGSKITDHILIGTPGKMFDW 741
RG+ ++ H++IGTPG + W
Sbjct: 204 APAATRGAPVSAHVVIGTPGTLKKW 228
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 499
++P S FE L+L P L+KG+Y M F PSKIQ +LP ++ P +++IAQ+ +G+G
Sbjct: 84 DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSG 143
Query: 500 KT 505
KT
Sbjct: 144 KT 145
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 317 DPNSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSG 493
DP++P S KTFE L L LL+G+Y M F PSKIQ LP +L P +N+IAQ+ +G
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNG 137
Query: 494 TGKT 505
+GKT
Sbjct: 138 SGKT 141
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/81 (37%), Positives = 39/81 (48%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K F L MLSR+D PQ L + PT EL +Q V +M K+ A +
Sbjct: 140 KTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKYTGITIASTADPKWDN 199
Query: 679 PRGSKITDHILIGTPGKMFDW 741
+KI D +IGTPGK+ W
Sbjct: 200 TNRNKIVDQAVIGTPGKILRW 220
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 LVESKLDIEIQRKDPNSPLY-SVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLL 451
L++ + +IQ +Y S FE L L P LLKG++ MGF+ PSKIQ LP +L
Sbjct: 77 LLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMIL 136
Query: 452 ADPPQNMIAQSQSGTGKT 505
P +++IAQ+ +G+GKT
Sbjct: 137 TPPYKDLIAQAHNGSGKT 154
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE- 675
K FVL MLSRVD N+ Q +C+ PT ELA Q V +M KF I A+ +
Sbjct: 153 KTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKF-TGITCACAIPPAQK 211
Query: 676 ----LPRGSKITDHILIGTPGKMFDW 741
+ + KITD ++IGT G + W
Sbjct: 212 DYVPIAKMPKITDQVVIGTSGTLMKW 237
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +2
Query: 335 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
YSV +FE + L NLL+G++A GF PS IQ+ A+ + ++IAQSQSGTGKTA
Sbjct: 18 YSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKG--FDVIAQSQSGTGKTA 73
Score = 33.1 bits (72), Expect = 8.1
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 612
K ++V+A L R+D K Q + L+PT ELA Q +V
Sbjct: 71 KTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKV 108
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ L L LL+ + MGF PSKIQE A+P LLA+ ++M+A +Q+GTGKTA
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAE-DRDMVALAQTGTGKTA 54
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTA 90
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTA 90
Score = 37.9 bits (84), Expect = 0.29
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F +++L +D Q L L+PT ELA+Q + + + ++ + G +
Sbjct: 88 KTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNV 146
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+ D H++ GTPG++FD
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFD 169
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +LSR+D+N PQ+L L+PT ELAIQ E A + G++
Sbjct: 74 KTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDF 133
Query: 679 P---RGSKITDHILIGTPGKMFD 738
RG K +++GTPG+M D
Sbjct: 134 SPQIRGLKRGAQVIVGTPGRMLD 156
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 326 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
S S +F L L P +L+ V A+G+ PS IQ ++P LLA +++ +Q+GTGKT
Sbjct: 18 STFMSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAG--NHLLGVAQTGTGKT 75
Query: 506 A 508
A
Sbjct: 76 A 76
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V F+ + L P LL+GVY+ GF APS+IQ A+ + +++IAQ+QSGTGKT
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKT 144
Score = 37.9 bits (84), Expect = 0.29
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +LS++D ++ Q L L+PT ELA Q V ++ P + + + G +
Sbjct: 143 KTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQR 202
Query: 679 PRGSKIT----DHILIGTPGKMFD 738
++ HI I TPG+ D
Sbjct: 203 VVDAQARAASHPHICICTPGRALD 226
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/92 (35%), Positives = 54/92 (58%)
Frame = +2
Query: 359 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC*AEL 538
L L P+LLKG+ MGF PSKIQ+ ALP +L N+IAQ+++G+GKTA +++
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCALPLILGS-CTNIIAQAKNGSGKTATFALAMLSKV 162
Query: 539 TLTRIILKYCVLVPHMN*PYKLVKLLQKWQNF 634
+ +++ + P + V+++QK F
Sbjct: 163 NVNVPLVQALCICPTRELATQNVQVIQKLGQF 194
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F LAMLS+V+ N Q LC+ PT ELA Q +V K+ +F +IK V +
Sbjct: 150 KTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQF-TQIKCFLGV--PQC 206
Query: 679 PRGSKITD-HILIGTPGKMFDW 741
PR H+ +GTPGK D+
Sbjct: 207 PRYEDNDQYHLYVGTPGKTMDF 228
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
V F+ ++LK +LL+GVYA GF PS IQ+ A+ L ++IAQ+QSGTGKTA
Sbjct: 29 VDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAI--LPCIKGHDVIAQAQSGTGKTA 82
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 600
K +FV+++L R+D++ Q L L+PT ELA Q
Sbjct: 80 KTATFVISILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +LSR+D+ KN PQ L L PT ELAIQ E A+ + G ++
Sbjct: 55 KTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADM 114
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K +++GTPG++ D
Sbjct: 115 RNQLRALKQNPQVIVGTPGRVMD 137
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SF++ L+R++++ ++ Q L L PT ELA+QT +V + P +++ G L
Sbjct: 86 KTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTL 145
Query: 679 PRG---SKITDHILIGTPGKMFDWGVK 750
+ HIL+GTPG++ D G K
Sbjct: 146 RDDILRLQQPVHILVGTPGRILDLGSK 172
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = +2
Query: 269 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 448
+QGL D+ Q +D + S FE L+ LL G+Y GF PS IQE A+P
Sbjct: 13 KQGLAAPPKDLRPQTEDVTATQGS--RFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMA 70
Query: 449 LADPPQNMIAQSQSGTGKTA 508
L ++++A++++GTGKTA
Sbjct: 71 LTG--RDILARAKNGTGKTA 88
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
V F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTA 85
Score = 37.9 bits (84), Expect = 0.29
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKYAVR 666
K +F +++L +++ Q L L+PT ELA Q +V + + C VR
Sbjct: 83 KTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR 142
Query: 667 GEELPRGSKITDHILIGTPGKMFD 738
E+ + HI++GTPG++FD
Sbjct: 143 -NEMQKLQAEAPHIVVGTPGRVFD 165
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SF L +L+R+D + PQ L L+PT ELAIQ E + A + P + G+
Sbjct: 57 KTASFALPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSY 116
Query: 679 PRGSKITD-----HILIGTPGKMFD 738
G++++ H+++GTPG++ D
Sbjct: 117 --GAQLSALRRGVHVVVGTPGRVID 139
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF 517
S F L L LL+ + +G+ +PS IQ +P LL + ++++ Q+Q+GTGKTA
Sbjct: 5 SFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNN--RDVLGQAQTGTGKTASFA 62
Query: 518 *RC*AELTLTRIILKYCVLVPHMN*PYKLVKLLQKWQNFV 637
A + + + + VL P ++ + Q++ ++
Sbjct: 63 LPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYI 102
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L +DS N Q + L PT ELAIQ E K++ + P+I + G+ +
Sbjct: 54 KTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPI 113
Query: 679 PRGSKITD---HILIGTPGKMFD 738
R K I+IGTPG++ D
Sbjct: 114 DRQIKALQKGVQIIIGTPGRVMD 136
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ L++ P + K V MGF S IQ A+P +LA +++ Q+Q+GTGKTA
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAH--KDVTGQAQTGTGKTA 56
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V+TFE L L +LL+G+++ GF PS IQ+ A+ ++ ++++AQ+QSGTGKT
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG--KDVLAQAQSGTGKT 107
Score = 41.5 bits (93), Expect = 0.023
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--- 669
K +F + L R+D N+ QV+ L+P ELA Q +V + ++ I+ + G
Sbjct: 106 KTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYL-NIEAFCCIGGTST 164
Query: 670 EELPRGSKITDHILIGTPGKMFD 738
+E K HI+I TPG++ D
Sbjct: 165 QETREKCKQGVHIIIATPGRLID 187
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA
Sbjct: 37 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTA 87
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L R+D PQVL L+PT ELAIQ E + AK P + G+ +
Sbjct: 94 KTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSM 153
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R H+++GTPG++ D
Sbjct: 154 VVQLRQLARGAHVIVGTPGRVMD 176
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 326 SPLYS-VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 502
+P+ S +++F L L+ LL + +G+ PS IQ +P LLA +++ ++Q+GTGK
Sbjct: 37 NPMTSPIESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAG--HDLLGEAQTGTGK 94
Query: 503 TA 508
TA
Sbjct: 95 TA 96
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +2
Query: 266 IRQGLVESKLDIEIQRKDPNSPLYSVKT----FEALHLKPNLLKGVYAMGFNAPSKIQET 433
I+ GL +K + + K N V T F+++ L P+LL+ + GF P+ IQ
Sbjct: 114 IKAGLEVAKKALSGKNKGKNKLGSGVVTGGGSFQSMGLHPSLLRSLLIRGFTTPTPIQRQ 173
Query: 434 ALPTLLADPPQNMIAQSQSGTGKT 505
A+P +++ PP++++ +++G+GKT
Sbjct: 174 AIPAIMSQPPRDVVGMARTGSGKT 197
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K+ ++++ ML R+D K++ Q L L PT ELA+Q +++ ++AK +K+ G L
Sbjct: 139 KSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL 198
Query: 679 PRGSKITD---HILIGTPGKMFD 738
D H++I TPG++ D
Sbjct: 199 RDDIMRLDETVHVVIATPGRILD 221
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPML 148
Query: 530 AELTLTRIILKYCVLVP 580
+ L + ++ VLVP
Sbjct: 149 ERIDLKKDHIQALVLVP 165
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
SV++F+ L L+ LLK + +GF PS IQ A+P LL +++I Q+Q+GTGKTA
Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEG--RDVIGQAQTGTGKTA 57
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L R+D+ Q L L PT ELA+Q +AK +++ G+ +
Sbjct: 55 KTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPI 114
Query: 679 -PRGSKIT--DHILIGTPGKMFD 738
P+ S + +++GTPG++ D
Sbjct: 115 EPQASALRRGAQVVVGTPGRILD 137
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
VKTFE L L NLL G+ F P+KIQ A+P LA ++I QS+SGTGKT
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALA--KMDLIIQSKSGTGKT 76
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +V+A++ + N N P + + PT ELAIQ + + K + K + G ++
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 679 PRGSKITD--HILIGTPGKM 732
+ K + ++IGTPG++
Sbjct: 135 AKDRKRMNESRVIIGTPGRL 154
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L +VD++K Q + ++PT ELAIQ GE K+ K +++ G+++
Sbjct: 52 KTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDI 110
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K HI++GTPG++ D
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILD 133
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L L +LL+ V +MGF + IQ +P L +++I Q+Q+GTGKTA
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQG--KDIIGQAQTGTGKTA 54
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 320 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 499
P +P+ +F +LK +L+ + +GF+ P+ IQE A+P LLA ++I Q+Q+GTG
Sbjct: 47 PVAPVAPAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAG--SDLIGQAQTGTG 104
Query: 500 KTA 508
KTA
Sbjct: 105 KTA 107
Score = 38.3 bits (85), Expect = 0.22
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE-VAAKMAKFCPEIKLKYAVRGEE 675
K +F L +L+ +D +K Q L L+PT ELA Q G+ +A + + Y +
Sbjct: 105 KTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQ 164
Query: 676 LPRGS-KITDHILIGTPGKMFD 738
G + +++GTPG++ D
Sbjct: 165 AQVGGLRRGARVVVGTPGRLLD 186
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ R+D + Q L LSPT ELAIQT E +++ K+ + + G+ +
Sbjct: 55 KTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPI 114
Query: 679 P---RGSKITDHILIGTPGKMFDWGVKFGMLY 765
R K T ++IGTPG++ D +K G L+
Sbjct: 115 ERQLRALKGTVQVVIGTPGRVID-HIKRGTLH 145
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
KTF + LL+ + MGF P+ IQ A+P +L +++ Q+Q+GTGKTA
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQIL--DGKDVTGQAQTGTGKTA 57
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE +LK LL G++ GF PS IQE A+P + ++++A++++GTGKTA
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTA 98
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FV+ L +V N Q L + PT ELA+QT +V + K C I G L
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNL 154
Query: 679 PRG---SKITDHILIGTPGKMFD 738
T HIL+GTPG++ D
Sbjct: 155 RDDILRLNETVHILVGTPGRVLD 177
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KY 657
K +F + MLS++D PQ L L PT ELA+Q E + + ++ + Y
Sbjct: 63 KTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSY 122
Query: 658 AVRGEELPRGSKITDHILIGTPGKMFD 738
AV+ L RG++ +++GTPG+M D
Sbjct: 123 AVQLAGLRRGAQ----VVVGTPGRMID 145
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +2
Query: 326 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
SP S TF L + P +L+ + +G+ +P+ IQ +P L+A +++ +Q+GTGKT
Sbjct: 7 SPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAG--SDVVGLAQTGTGKT 64
Query: 506 APLF*RC*AELTLTRIILKYCVLVP 580
A +++ +T + + VLVP
Sbjct: 65 AAFAIPMLSKIDITSKVPQALVLVP 89
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE-IKLKYAVRGEE 675
K +F L +L +D+N ++ Q L LSPT EL Q + K K+ + I L+ GE+
Sbjct: 53 KTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEK 112
Query: 676 LPR---GSKITDHILIGTPGKMFD 738
+ R K T HI+I TPG++ D
Sbjct: 113 IDRQMNNLKRTTHIVIATPGRLID 136
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+ TF L ++ + +K + +G P+ IQE A+P LL P + I +Q+GTGKTA
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKS-PTDFIGLAQTGTGKTA 55
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = +2
Query: 296 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 475
+ E R D +S + T+E LK +LLKG+Y++GF PS IQ+ A+ ++ +++
Sbjct: 23 EFEDLRSD-SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPII--DGRDIR 79
Query: 476 AQSQSGTGKT 505
AQ+QSGTGKT
Sbjct: 80 AQAQSGTGKT 89
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+++D ++ +PQ+L ++PT ELAIQ + K+ ++ G+
Sbjct: 55 KTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRY 114
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K +++GTPG++ D
Sbjct: 115 DIQLRALKQGAQVVVGTPGRILD 137
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +2
Query: 251 SLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQE 430
S++ R G S +D E + + + +F+ + +K +LL+G+YA F PS +Q+
Sbjct: 245 SMVPANRGGCRNSAVDDEKLVFETTEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQ 304
Query: 431 TALPTLLADPPQNMIAQSQSGTGKTA 508
A+ ++ ++IAQ+QSGTGKT+
Sbjct: 305 RAVLPIIQG--HDVIAQAQSGTGKTS 328
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+K F ALHL+ +++G+ A F P+KIQ A+P L +++ QS+SGTGKT
Sbjct: 24 MKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTG--MDLLVQSKSGTGKT 76
Score = 40.3 bits (90), Expect = 0.053
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +V+ L + +P+VL + PT ELA+Q ++ + + K+ + G ++
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 679 PRG-SKITD-HILIGTPGKM 732
R K+ + H+ IGTPG++
Sbjct: 135 TRDREKLRNCHVAIGTPGRL 154
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 281 VESKLDIEIQR--KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLA 454
+E+ LD I D L + F + L LLK +Y GF PS IQ++A+P +L
Sbjct: 28 IETGLDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILR 87
Query: 455 DPPQNMIAQSQSGTGKT 505
N++ QS+SGTGKT
Sbjct: 88 G--HNVVVQSKSGTGKT 102
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+++++ PQ L L PT ELA Q + K+AK IK+ GE
Sbjct: 71 KTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPS 130
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+ + H+L+GTPG++ D
Sbjct: 131 RIQTNSLEHGAHVLVGTPGRVLD 153
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE L +LK + ++G+N PS++Q +P LL QN++ +S++G+GKTA
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKG--QNLVVRSKTGSGKTA 55
Score = 36.3 bits (80), Expect = 0.87
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKYAVR 666
K SF + + ++ + N Q L + PT ELA+Q + + + + C I K +++
Sbjct: 53 KTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIK 112
Query: 667 GEELPRGSKITDHILIGTPGKMFD 738
+ ++ HI++ TPG++ D
Sbjct: 113 DQIAELKQRV--HIVVATPGRILD 134
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 50.4 bits (115), Expect = 5e-05
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FVL +L +++ N N PQ+L L+PT ELAIQ E A+ + G+
Sbjct: 62 KTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSY 121
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K H ++GTPG++ D
Sbjct: 122 DIQLRPLKRGVHAIVGTPGRVMD 144
Score = 41.5 bits (93), Expect = 0.023
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S FE L L +L + ++G+ PS IQE + LL + +++I Q+Q+GTGKTA
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNN--KDIIGQAQTGTGKTA 64
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+KTFE L + P + K + MG+ P +QE +P LL + +++A +Q+GTGKTA
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGE-NNDVVALAQTGTGKTA 55
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L ++D PQ L L PT EL +Q +K+ +K+ G +
Sbjct: 53 KTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSI 112
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K HI++ TPG++ D
Sbjct: 113 DSQIRSLKRGVHIIVATPGRLLD 135
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F AL + P +L + A+G+ PS IQ A+P +LA +MI Q+Q+GTGKTA
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAG--HDMIGQAQTGTGKTA 75
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L MLSR+D + PQ+L L+PT ELA+Q A P + + G +
Sbjct: 73 KTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPM 132
Query: 679 -PRGSKITD--HILIGTPGKMFD 738
P+ + IL+ TPG++ D
Sbjct: 133 GPQLKALRQGAQILVATPGRLCD 155
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 50.0 bits (114), Expect = 7e-05
Identities = 22/54 (40%), Positives = 39/54 (72%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
KTFE L L+P+L++ + MG P+ IQE A+P +L ++++A++++G+GKT
Sbjct: 24 KTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEG--KDVVARAKTGSGKT 75
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F AL L+P + + + A GF PS IQE A+P LL+ ++I Q+Q+GTGKTA
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQ-DHDIIGQAQTGTGKTA 55
Score = 33.1 bits (72), Expect = 8.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 630
K +F L ++ +++ PQ L L PT ELAIQ E K
Sbjct: 53 KTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCK 96
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +2
Query: 281 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 460
++ ++D+E+ ++PN F +L P +LK + M F PS+IQ A+P L
Sbjct: 1 MQEQIDVELLPQEPNG-------FITFNLDPLILKALDKMNFKEPSRIQTEAIP--LIQK 51
Query: 461 PQNMIAQSQSGTGKTA 508
Q++IA SQ+G+GKTA
Sbjct: 52 KQDLIALSQTGSGKTA 67
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 502
N PL T+E++ LKP L++ + G+ PS IQ+ A+ + +N++ QSQ+G+GK
Sbjct: 13 NVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI--YIISQGKNIMFQSQNGSGK 70
Query: 503 TAPLF*RC*AELTLTRIILKYCVLVP 580
TA A L LT + ++ P
Sbjct: 71 TATFSIGTLARLRLTSKTTELIIVSP 96
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ L LK +LLK + MGF PS+IQ ++P L ++I Q+Q+GTGKTA
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEG--HDIIGQAQTGTGKTA 56
Score = 39.5 bits (88), Expect = 0.093
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F A+++ D K P+ L L+PT ELAIQ E ++ K ++ + G+
Sbjct: 54 KTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH-EKLSVLPIYGGQ 112
Query: 673 ELPRGSKITDH---ILIGTPGKMFD 738
+ R + + I++GTPG++ D
Sbjct: 113 PIDRQIRALKNGVDIVVGTPGRVLD 137
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ LK +LKG+ GF+ PS +Q ++P +L +++IAQ+Q+GTGKTA
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQG--KDLIAQAQTGTGKTA 97
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L+ ++ NK+ + L ++PT ELA+Q E K+ +F IK G+ +
Sbjct: 95 KTAAFAIPILNTLNRNKDI-EALIITPTRELAMQISEEILKLGRF-GRIKTICMYGGQSI 152
Query: 679 PRGSKITD---HILIGTPGKMFD 738
R + + +I TPG++ D
Sbjct: 153 KRQCDLLEKKPKAMIATPGRLLD 175
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + + VD + N Q L L PT ELA+Q K++KF +++ GE +
Sbjct: 51 KTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESI 110
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K HI++GTPG++ D
Sbjct: 111 ERQIRDLKAGAHIVVGTPGRIID 133
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ L L P +++ + ++G++ + IQE +P L+ +++ Q+Q+GTGKTA
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTG--KDLTGQAQTGTGKTA 53
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 329 PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
P V F L L+P LL+ + A+G+ P+ IQ A+P L+A ++++ Q+ +GTGKTA
Sbjct: 52 PAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAG--RDLLGQAATGTGKTA 109
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 48.8 bits (111), Expect = 2e-04
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F+L +L RV+ K Q L ++PT ELAIQ K+A+ I + A G+++
Sbjct: 53 KTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAE-VKGINILAAYGGQDV 111
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K + HI+IGTPG++ D
Sbjct: 112 EQQLRKLKGSIHIIIGTPGRLLD 134
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ + L N+L + G+ AP+ IQE +P LL+ N+I Q+Q+GTGKTA
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSG-KNNVIGQAQTGTGKTA 55
Score = 35.9 bits (79), Expect = 1.2
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQT-GEV-AAKMAKFCPEIKLKYAVRGE 672
K +F + ++ R+D N Q L L+PT ELA+Q E+ + K K + + V
Sbjct: 53 KTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIG 112
Query: 673 ELPRGSKITDHILIGTPGKMFD 738
R K +++GTPG++ D
Sbjct: 113 NQIRALKRRVDLVVGTPGRIID 134
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+R N+ PQVL L+PT ELAIQ E + A ++ G+
Sbjct: 65 KTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSY 124
Query: 679 PR---GSKITDHILIGTPGKMFD 738
+ K H+++GTPG++ D
Sbjct: 125 GQQLAALKRGVHVIVGTPGRVID 147
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/101 (26%), Positives = 50/101 (49%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 502
++P + F L L +++ V +G+ PS IQ +P LLA ++++ Q+Q+GTGK
Sbjct: 8 SNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAG--RDVLGQAQTGTGK 65
Query: 503 TAPLF*RC*AELTLTRIILKYCVLVPHMN*PYKLVKLLQKW 625
TA L ++ + VL P ++ + Q++
Sbjct: 66 TAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRY 106
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE L L +LL+ + +GF P+++QE A+P LL + +++A +Q+GTGKTA
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLL-EKDIDLVALAQTGTGKTA 55
Score = 39.9 bits (89), Expect = 0.071
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--- 669
K +F ++ ++D+N Q L LSPT EL +Q +K+ I + G
Sbjct: 53 KTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASI 112
Query: 670 EELPRGSKITDHILIGTPGKMFD 738
E R K I++ TPG+M D
Sbjct: 113 TEQARDIKRGAQIIVATPGRMQD 135
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF 517
S K F +L L +L+K V ++G+ ++IQE +LP +L +++IAQ+++GTGKTA
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAIL--DGKDLIAQAKTGTGKTAAFG 59
Query: 518 *RC*AELTLTRIILKYCVLVP 580
++L L ++ +L P
Sbjct: 60 LGVLSKLVLDDYRIQVLILCP 80
Score = 41.5 bits (93), Expect = 0.023
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +LS++ + QVL L PT EL Q + +A+ P IKL G
Sbjct: 54 KTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPF 113
Query: 679 -PRGSKITD--HILIGTPGKM 732
P+ + HI++GTPG++
Sbjct: 114 RPQMKSVAHGAHIVVGTPGRI 134
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L L +LK + MGF PS IQ A+P LL +++I Q+Q+GTGKTA
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQG--KDVIGQAQTGTGKTA 58
Score = 38.3 bits (85), Expect = 0.22
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ R+ + Q L L+PT ELAIQ E K+ + +K G+ +
Sbjct: 56 KTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHA-RVKTIAIYGGQSI 114
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R + ++IGTPG++ D
Sbjct: 115 ERQIRSLRFGVDVVIGTPGRILD 137
>UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;
n=10; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 47 - Arabidopsis thaliana (Mouse-ear cress)
Length = 551
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +2
Query: 326 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
SPL+S K+FE L L +LL + GF+ P+ +Q A+P ++ + + QS +G+GKT
Sbjct: 104 SPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKG--HDAVIQSYTGSGKT 161
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE LHL LLK V +GF+ P+ IQ A+P LA ++++A + +G+GKTA
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIP--LALNGKDILASASTGSGKTA 242
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE++ L P L + + + GFN P+ IQ A+P +LA ++++A S++G+GKTA
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAG--RDIVACSKTGSGKTA 62
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/54 (38%), Positives = 38/54 (70%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F++L L P++L+ V G+ P+ IQ+ A+P +L ++++A +Q+GTGKTA
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG--RDLMASAQTGTGKTA 53
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE- 675
K +F L +L ++D++ Q L L PT ELA Q ++A+F P K+ G+
Sbjct: 53 KTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPF 112
Query: 676 -LPRGS-KITDHILIGTPGKMFD 738
+ R S + HI++ TPG++ D
Sbjct: 113 GMQRDSLQHAPHIIVATPGRLLD 135
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+F+ L ++L G+ MG+ PS+IQ A+P +L +N++ QSQSG+GKT
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKG--KNLVMQSQSGSGKT 76
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+K FE L L LL G+ MGF P++IQ+ ++P LL + I +Q+GTGKTA
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDG-DFIGLAQTGTGKTA 66
Score = 36.7 bits (81), Expect = 0.66
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L +D N Q L L+PT ELA Q +M+K ++ + G +
Sbjct: 64 KTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANI 123
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R + I++ TPG++ D
Sbjct: 124 MNQIRDIRRGAQIIVATPGRLMD 146
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L L +L++GV AMG+ P+ +Q A+P +LA ++++A +Q+GTGKTA
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAG--RDLVASAQTGTGKTA 53
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/80 (31%), Positives = 45/80 (56%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SF++ +L + S + + L PT ELA+Q + K++K+ I L+ ++
Sbjct: 65 KTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVTGVDSKI 124
Query: 679 PRGSKITDHILIGTPGKMFD 738
+ + I +IL+GTPGK++D
Sbjct: 125 DKNN-IDFNILLGTPGKIYD 143
Score = 43.6 bits (98), Expect = 0.006
Identities = 29/96 (30%), Positives = 51/96 (53%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
F+ L LK +LL G+ +G+ PS IQE +P LA ++++A+S++GTGKT
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIP--LAINNKDILARSKNGTGKTLSFLIPIL 74
Query: 530 AELTLTRIILKYCVLVPHMN*PYKLVKLLQKWQNFV 637
+ ++ +LVP ++ LL+K ++
Sbjct: 75 QNIYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/54 (38%), Positives = 38/54 (70%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
KTFE L L+P+L++ + G P+ IQE A+P +L ++++A++++G+GKT
Sbjct: 24 KTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEG--KDVVARAKTGSGKT 75
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L+L P++++ V+ MGF + IQE A+P LA +++I Q+++GTGKTA
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIP--LAMEGKDLIGQARTGTGKTA 54
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + M+ + Q L + PT ELA+Q E ++ K I+ G++
Sbjct: 52 KTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKV-RGIRSVAIYGGQDF 110
Query: 679 PRGSKITD---HILIGTPGKMFD 738
K + HI++GTPG++ +
Sbjct: 111 RSQVKALEELPHIVVGTPGRLLE 133
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA----PLF 517
+E L P LL+ VY +GF P+ IQ A+P L D +++IA++ +G+GKT P+
Sbjct: 37 WENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLED-KRDIIAKASTGSGKTGAYSIPII 95
Query: 518 *RC*AELTLTRIILKYCVLVPHMN*PYKLVKLLQK 622
+E L+ +K +LVP ++ K ++K
Sbjct: 96 QNILSE-GLSEHNIKSVILVPTKELANQVTKFIEK 129
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +++K +LK + +GF P+KIQE LP A +++I Q+Q+GTGKTA
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLP--FAFEGKDIIGQAQTGTGKTA 53
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF-CPEIKLKY-AVRGE 672
K +F + +LS +D + N Q L ++PT ELA Q + + K+ C +I L V E
Sbjct: 51 KTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYE 110
Query: 673 ELPRGSKITDHILIGTPGKMFD 738
+ +I++ TPG++ D
Sbjct: 111 KQKAALNSGVNIVVATPGRLED 132
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 299 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 478
+ I + +PL +V FE+ L ++ + MGF P+ IQ ALP LLA + I
Sbjct: 29 LPIPERSLMTPLTTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAG-ANDFIG 87
Query: 479 QSQSGTGKTA 508
+ +GTGKTA
Sbjct: 88 LASTGTGKTA 97
Score = 39.1 bits (87), Expect = 0.12
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ +DS Q L LSPT ELA+Q E + K +++ G
Sbjct: 95 KTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGK-KKGVRVVTIYGGASY 153
Query: 679 PR---GSKITDHILIGTPGKMFDW 741
G K HI++ TPG++ D+
Sbjct: 154 RTQIDGIKRGAHIVVATPGRLVDF 177
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L R++S + PQVL L+PT ELA+Q + A P +K+ G +
Sbjct: 121 KTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDF 180
Query: 679 PRGSKITD-----HILIGTPGKMFD 738
S+I+ +++GTPG++ D
Sbjct: 181 --RSQISTLRRGVDVVVGTPGRVMD 203
Score = 39.9 bits (89), Expect = 0.071
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ LLK + G++ PS IQ+ A P L+ ++++ Q+Q+GTGKTA
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLG--RDLVGQAQTGTGKTA 123
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 46.8 bits (106), Expect = 6e-04
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM--AKFCPEIKLKYAVRG- 669
K +FVL +LSR+D+N QVL L+P+ ELA+QT +VA + A L G
Sbjct: 43 KTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVGASVASLIGGANGR 102
Query: 670 EELPRGSKITDHILIGTPGK---MFDWGV 747
+ + K HI++GT G+ M D GV
Sbjct: 103 RQADKIKKDKPHIVVGTLGRVLTMVDGGV 131
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = +2
Query: 296 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 475
D+ I+ D S FE LK LL G++ MG+ PS IQE ++P L+ ++++
Sbjct: 82 DLRIKTSDVTST--KGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDIL 137
Query: 476 AQSQSGTGKTAPLF*RC*AELTLTRIILKYCVLVP 580
A++++GTGK+ L L + ++ V+VP
Sbjct: 138 ARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVP 172
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L +D PQ+L L+PT ELA+Q E +K + + G+
Sbjct: 56 KTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRY 115
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R + I++GTPG++ D
Sbjct: 116 DVQLRALRQGPQIVVGTPGRLLD 138
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+A+ L NLLK + GF+ P+ IQ +P ++ D Q+++ +++G+GKTA
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMED--QDVVGMARTGSGKTA 143
Score = 33.9 bits (74), Expect = 4.6
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +FV+ M+ ++ S+ K + L LSP+ ELA+QT +V ++ K ++K V G+
Sbjct: 141 KTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGD 199
Query: 673 ELPRGSKI---TDHILIGTPGKMFDWGVKFGM 759
L + I+I TPG+ V+ +
Sbjct: 200 SLEEQFGMMAGNPDIVIATPGRFLHLKVEMNL 231
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE---IKLKYAVRG 669
K +++L L+R++ + Q++ +PT ELA Q E K+ KFC E I + + G
Sbjct: 54 KTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGG 113
Query: 670 EELPRG---SKITDHILIGTPGKMFD 738
+ R K HI++GTPG++ D
Sbjct: 114 TDKQRSIEKLKKQPHIVVGTPGRIKD 139
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+TF KP L+ V + F P+ IQ+ P + ++I QSQ+G+GKT
Sbjct: 4 QTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFP--VVKKGVSVIGQSQTGSGKT 55
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L ++D Q L L PT ELA Q G+ K+A P +KL G +
Sbjct: 76 KTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGG--M 133
Query: 679 PRGSKITD------HILIGTPGKM 732
P G ++ H+++GTPG++
Sbjct: 134 PLGPQLASLEAHDPHVVVGTPGRI 157
Score = 41.1 bits (92), Expect = 0.031
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 320 PNSPLY-SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 496
PN L ++ F AL L P L G+ A+G+ + +Q +LP +L ++IAQ+ +G+
Sbjct: 17 PNPGLKCAMNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRG--LDVIAQAPTGS 74
Query: 497 GKTA 508
GKTA
Sbjct: 75 GKTA 78
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +LSR+D + PQVL L+PT ELA Q + + +++ G+E
Sbjct: 59 KTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEY 118
Query: 679 PR---GSKITDHILIGTPGKMFD 738
G + +++GTPG++ D
Sbjct: 119 REQLSGLRRGAQVIVGTPGRVID 141
Score = 43.2 bits (97), Expect = 0.008
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC 526
TF L L +L + +G+ PS IQ +P LL ++++ Q+Q+GTGKTA
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEG--RDVLGQAQTGTGKTAAFALPL 67
Query: 527 *AELTLTRIILKYCVLVP 580
+ L L R + VL P
Sbjct: 68 LSRLDLQRREPQVLVLAP 85
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
FE LKP ++ V+ +GF P+ IQ+ +P +L +++I QSQ+GTGKT
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVL--KKESVIGQSQTGTGKT 55
Score = 43.2 bits (97), Expect = 0.008
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM--AKFCPEIKLKYAVRGE 672
K +++L +L+++D K+ QV+ +PT ELA Q + A K+ + +I+ K + G
Sbjct: 54 KTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGT 113
Query: 673 ELPRG---SKITDHILIGTPGKMFD 738
+ + KI H+++GTPG++ D
Sbjct: 114 DKQKSIDKLKIQPHLVVGTPGRIAD 138
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/54 (38%), Positives = 39/54 (72%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
T+++L+L P LL+ + +GF P+ IQ +A+P L + +++IA++ +G+GKTA
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIP-LALEEKRDIIAKASTGSGKTA 73
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F+L +L +D + + Q L + PT ELAIQ G V K I + G +
Sbjct: 56 KTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQN 115
Query: 679 PR----GSKITDHILIGTPGKMFD 738
R K HI+IGTPG++ D
Sbjct: 116 YRIQFNDLKKNPHIIIGTPGRLLD 139
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +++L +L R+ K QVL ++PT ELA+Q + AK+ K+ +++ G+ +
Sbjct: 52 KTAAYLLPVLQRIQRGKK-AQVLIVTPTRELALQVADEVAKLGKYL-KVRALAVYGGQAI 109
Query: 679 P---RGSKITDHILIGTPGKMFD 738
RG + +++GTPG++ D
Sbjct: 110 ERQIRGLRQGVEVIVGTPGRILD 132
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
++ F+ L L LLK V +GF P+ IQ+ A+P +L N++ Q+ +GTGKTA
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTA 54
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+FE L L L V GF P+ IQ A+P LLA N+IA++++GTGKTA
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAG-DANIIAKARTGTGKTA 99
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L L L+K V +G+ P+ IQ A+P++LA +N++A +Q+GTGKTA
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAG--KNVLAAAQTGTGKTA 53
Score = 39.9 bits (89), Expect = 0.071
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSR-VDSNKNYPQ---VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K SFVL +L R D+ K P+ + L+PT ELA+Q E + AK+ P +
Sbjct: 51 KTASFVLPLLHRFADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGG 110
Query: 667 GEELPRGSKITD--HILIGTPGKMFD 738
+ P+ ++ + +L+ TPG++ D
Sbjct: 111 VDAAPQKKRLIEGVDLLVATPGRLLD 136
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +2
Query: 335 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+S ++E L + L++ + + F PSKIQ ALP +L D +N+IAQSQ+G+GKT
Sbjct: 221 HSKNSWEELKIDNELIQILTYLKFFGPSKIQAYALPIIL-DSNRNLIAQSQNGSGKT 276
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FV+AMLS+++ Q +C+ PT ELA Q +V K K+ E+
Sbjct: 275 KTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKYLNVRTFLAVPLCEKY 334
Query: 679 PRGSKITDHILIGTPGKMFDW 741
+ + I I +GTPGK D+
Sbjct: 335 NKSNGI--QIYVGTPGKTLDF 353
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +2
Query: 320 PNSPLYS-VKTFE-ALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 493
P++P+ + V+TFE A H P LL+ + GF PS IQ A P LL +++I +Q+G
Sbjct: 313 PSAPIPNPVQTFEQAFHEYPELLEEIKKQGFAKPSPIQAQAWPVLLKG--EDLIGIAQTG 370
Query: 494 TGKT 505
TGKT
Sbjct: 371 TGKT 374
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +2
Query: 335 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+S T+E L + L++ + + F PSKIQ ALP +L+ +N+IAQSQ+G+GKT
Sbjct: 157 HSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSS-NKNLIAQSQNGSGKT 212
Score = 42.3 bits (95), Expect = 0.013
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FV+AML +++ + Q +C+ PT EL+ Q +V K+ +K+ AV E
Sbjct: 211 KTLTFVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-NVKVFLAVPLCE- 268
Query: 679 PRGSKITDH-ILIGTPGKMFDW 741
R +K + I +GTPGK D+
Sbjct: 269 -RYNKSGGYQIYVGTPGKTLDF 289
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/56 (37%), Positives = 38/56 (67%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+++F+ L L +L+ + GF P+ IQE A+P +L + ++++ Q+Q+GTGKTA
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIP-ILIEGKRDIVGQAQTGTGKTA 55
Score = 37.1 bits (82), Expect = 0.50
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L +D + Q L L+PT ELAIQ E + K + + G+ +
Sbjct: 53 KTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSI 111
Query: 679 PRGSKITD---HILIGTPGKMFD 738
R + I++GTPG++ D
Sbjct: 112 DRQIRELRRGVQIVVGTPGRILD 134
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L + + K + MGF PS IQ A+P +LA ++I Q+Q+GTGKTA
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAG--GDVIGQAQTGTGKTA 58
Score = 35.5 bits (78), Expect = 1.5
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ +V + ++ Q L L+PT ELAIQ K++K +I+ G+ +
Sbjct: 56 KTAAFGIPVVEKVSTGRHV-QALILTPTRELAIQVSGEIQKLSKH-KKIRTLPIYGGQSI 113
Query: 679 PRGSKITD---HILIGTPGKMFD 738
K ++IGTPG++ D
Sbjct: 114 VHQIKALKQGVQVVIGTPGRIID 136
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SF + + V+ +N PQ L L+PT ELA+Q E + +F IK A+ G+
Sbjct: 54 KTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF-KRIKAA-AIYGKSP 111
Query: 679 PRGSKI----TDHILIGTPGKMFD 738
K+ HI++GTPG++ D
Sbjct: 112 FARQKLELKQKTHIVVGTPGRVLD 135
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S K+F L + + + +G+ P+++Q +P L ++++ +SQ+G+GKTA
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQK--KDLVVKSQTGSGKTA 56
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF + LL + +MGFN P+ IQ A+P ++++ +++A +Q+GTGKTA
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSN--SDLVACAQTGTGKTA 53
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE+L L P L++ + A+G+ P+ IQ ALP LL ++++ + +GTGKTA
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEG--KDLLGIAATGTGKTA 88
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F L +++ +D S PQVL L+PT ELAIQ E AK P + + G+
Sbjct: 57 KTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQ 116
Query: 673 ELP---RGSKITDHILIGTPGKMFD 738
E R K +++GT G++ D
Sbjct: 117 EYGSQIRALKQGVKVVVGTTGRVMD 141
Score = 41.9 bits (94), Expect = 0.018
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
K F L L +++ V +G+ P+ IQ+ A+P +L+ ++++ Q+Q+GTGKTA
Sbjct: 7 KDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSG--RDVLGQAQTGTGKTA 59
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/52 (32%), Positives = 35/52 (67%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+ AL++ P+L++ + F P+ IQ A+P L+ PP++++ +++G+GKT
Sbjct: 29 WRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKT 80
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
KTF+ L L P +LK V +G+ P++IQE ++P L +++I +Q+G+GKTA
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVAL--QKKDIIGIAQTGSGKTA 61
Score = 33.9 bits (74), Expect = 4.6
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K SF+L M+ + + N+ + ++ + PT ELA Q EV +M K P + V
Sbjct: 59 KTASFLLPMVQHLLNVKEKNRGFYCII-IEPTRELAAQVVEVIDEMGKALPGLTSCLLVG 117
Query: 667 GEELPRGS---KITDHILIGTPGKM 732
G ++ + S +++GTPG++
Sbjct: 118 GMDVMKQSVQLAKRPQVIVGTPGRI 142
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KY 657
K +F L L+++D++ PQ++ L+PT ELA+Q E K +++ Y
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 658 AVRGEELPRGSKITDHILIGTPGKMFD 738
+ ++L RG++ +++GTPG++ D
Sbjct: 125 GPQFQQLERGAQ----VVVGTPGRLMD 147
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +L L NLL V ++GF + + IQ +P LLA ++++ ++Q+GTGKTA
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAG--KDVLGEAQTGTGKTA 67
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE-- 672
K +F + + VD ++N PQ L L PT ELAIQ E + +F +K+ AV G+
Sbjct: 54 KTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF-KRLKVA-AVYGKAP 111
Query: 673 --ELPRGSKITDHILIGTPGKMFD 738
+ K H+++GTPG++ D
Sbjct: 112 FYHQEKELKQKTHVVVGTPGRIID 135
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L LLK + + F +P+K+Q+ +P +L +++I +SQ+G+GKTA
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEH--KDIIVKSQTGSGKTA 56
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FV+ L +++ N Q + L PT ELA Q + AK IK+ G+ +
Sbjct: 54 KTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPM 113
Query: 679 P---RGSKITDHILIGTPGKMFD 738
+ K + HI++GTPG++ D
Sbjct: 114 GPQIQSLKHSPHIIVGTPGRVMD 136
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+V+T + L + P + K + + G + S IQ +LP L +++I Q+Q+G+GKT
Sbjct: 2 TVETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQG--KDVIGQAQTGSGKT 55
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF 517
S F L L P LL V +GF + IQ+ ++P LLA +++I Q+++G+GKTA
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAG--KDIIGQAKTGSGKTAAFS 102
Query: 518 *RC*AELTLTRIILKYCVLVP 580
++ L + +L+ +L P
Sbjct: 103 LPILNKINLDQPLLQALILCP 123
Score = 38.7 bits (86), Expect = 0.16
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L++++ ++ Q L L PT ELA Q K+ + P +K+ G+
Sbjct: 97 KTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSG 156
Query: 679 PRGSKITDH---ILIGTPGKMFDW 741
+ ++ I++GTPG++ D+
Sbjct: 157 REQADALENGVQIVVGTPGRLADF 180
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L R+ + Q L L PT ELA Q + ++A+F IK+ G+
Sbjct: 54 KTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQ-- 111
Query: 679 PRGSKI-----TDHILIGTPGKMFD 738
P G ++ HI++GTPG++ D
Sbjct: 112 PMGQQLDSLVHAPHIVVGTPGRIQD 136
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE+ L P + K + GFN P+ IQ ++P +LA ++++A +Q+GTGKTA
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAG--EDVLAIAQTGTGKTA 53
Score = 36.7 bits (81), Expect = 0.66
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKN--YPQVLCL--SPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K +FV+ +L+ + + K + + CL +PT ELA+Q EV K+ + ++
Sbjct: 51 KTAAFVIPVLNTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAY-TRLRTVCITG 109
Query: 667 GEELPRGSKITDH---ILIGTPGKMFD 738
G E D+ IL+ TPG+MFD
Sbjct: 110 GVEQEAQIAAADYGIDILVATPGRMFD 136
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+FE+ + P ++ GV A G+ P+ IQ A+P ++A ++I +Q+GTGKTA
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAG--HDVIGLAQTGTGKTA 53
>UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3561-PA - Tribolium castaneum
Length = 446
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNK----NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K +++L ++ + +NK N PQ L L P ELA Q GEVA +A+ +K+ R
Sbjct: 136 KTIAYLLPIICNLITNKTPKLNTPQALILVPNRELAYQVGEVAEALAESLLNVKIIVGGR 195
Query: 667 GEELPRGSKITD-HILIGTPGKM 732
+++ + + ILIGTPG +
Sbjct: 196 TKKIMMNPEFGEVDILIGTPGAL 218
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +FVL +L ++D + Q L ++PT ELA+Q KM +I + G+++
Sbjct: 55 KTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDV 114
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K HI++ TPG++ D
Sbjct: 115 AQQLRKLKGNTHIVVATPGRLLD 137
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +LHL P LLK + +GF P+ IQ A+P ++ ++++A + +G+GKTA
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSG--RDVMASAVTGSGKTA 53
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +2
Query: 365 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
LK NLL+G+YA G PS IQ+ + ++I Q+QSGTGKTA
Sbjct: 3 LKENLLRGIYAYGIEKPSAIQQKGIVPFCKG--LDVIQQAQSGTGKTA 48
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/66 (34%), Positives = 41/66 (62%)
Frame = +2
Query: 311 RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQS 490
+++ NS L S + L L +L+K V+ MG+ APS IQ +P L ++++A +++
Sbjct: 114 KQEVNSHLTSDTNWSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEG--KDLLATAET 171
Query: 491 GTGKTA 508
G+GK+A
Sbjct: 172 GSGKSA 177
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +2
Query: 302 EIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 481
E+ RK+ FE+L+L PN+ + G+ P+ IQ +P +L+ +++A
Sbjct: 14 ELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSG--VDVVAM 71
Query: 482 SQSGTGKTA 508
+++G+GKTA
Sbjct: 72 ARTGSGKTA 80
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/70 (32%), Positives = 42/70 (60%)
Frame = +2
Query: 296 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 475
D E ++K + + + KTFE+L L N K + MGF ++IQ A+P L+ ++++
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMG--EDVL 195
Query: 476 AQSQSGTGKT 505
+++G+GKT
Sbjct: 196 GAARTGSGKT 205
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F+L ++ R P L L+PT ELAIQ A ++ P +K V G L
Sbjct: 253 KTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPL 312
Query: 679 -PRGSKITDH--ILIGTPGKMFD 738
P+ ++ H ++I TPG++ D
Sbjct: 313 PPQLYRLQQHVKVIIATPGRLLD 335
>UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 594
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
TFEA HL LL+ + +GF P+ IQ A+P L +++IA++ +G+GKT
Sbjct: 18 TFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIP-LALQQKRDIIAKAATGSGKT 69
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K+ ++++ +L R+D K+ Q + + PT ELA+Q ++ +++K K+ G L
Sbjct: 131 KSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL 190
Query: 679 PRGSKI----TDHILIGTPGKMFD 738
R + T H++I TPG++ D
Sbjct: 191 -RDDVMRLDDTGHVVIATPGRILD 213
Score = 41.5 bits (93), Expect = 0.023
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 140
Query: 530 AELTLTRIILKYCVLVP 580
L L + ++ V+VP
Sbjct: 141 ERLDLKKDNIQAMVIVP 157
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLKYAVRGEE 675
K +F+L ++ +V + Q++ +P+ ELA Q + A ++A+F PEI++ V G +
Sbjct: 52 KTHTFLLPLMDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTD 111
Query: 676 LPRG-SKI---TDHILIGTPGKMFD 738
R +K+ H++IGTPG++ D
Sbjct: 112 KQRQLNKLKHQQPHVVIGTPGRILD 136
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+F+ +P + + + GF P+++QE +P + +++I QSQ+G+GKT
Sbjct: 3 SFKQFQFQPFINEALAEKGFEEPTEVQEKLIP--IIKKGKSVIGQSQTGSGKT 53
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ +++ Q L L PT EL +Q E K+ +F EI++ GE
Sbjct: 53 KTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESY 112
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R + H++I TPG+ D
Sbjct: 113 TKQFRALEAKPHLIIATPGRAID 135
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+FEAL L+ L+ + G++ + IQ A+P +LA +++A +Q+GTGKTA
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQ--HDLLAVAQTGTGKTA 53
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F++ +L ++++ PQ + L PT+ELA Q E K A + + G +
Sbjct: 51 KTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHI 110
Query: 679 PRG--SKITDHILIGTPGKMFD 738
R + +I++GTPG++ D
Sbjct: 111 QRQIYALRKSNIIVGTPGRIAD 132
Score = 39.5 bits (88), Expect = 0.093
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F L+L P L + + MG+ ++IQE A+P L Q++I +S +GTGKT
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNS--QDIIGKSHTGTGKT 52
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +LK + V GF PS +Q+ A+P +L +MIAQ+Q+GTGKTA
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEG--HDMIAQAQTGTGKTA 53
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 314 KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 493
KD Y+V F+ LK LL+ V GF P+++Q +L L + +I Q+++G
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLG--EQLICQAKAG 120
Query: 494 TGKTA 508
TGKTA
Sbjct: 121 TGKTA 125
Score = 39.5 bits (88), Expect = 0.093
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE- 675
K FVL +L+ +++ N + L ++ T ELA Q + ++ KF +K++ G E
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEP 182
Query: 676 ----LPRGSKITDHILIGTPGKMFD 738
+ + I++GTPG++ D
Sbjct: 183 VSVNIQTIETVKPQIVVGTPGRLKD 207
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L+L N+L + GF P+ IQ +P L D N++AQ+++G+GKTA
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLND-EYNIVAQARTGSGKTA 59
Score = 36.3 bits (80), Expect = 0.87
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SF + ++ V+ N N + + L+PT ELAIQ + + K +K+ G+ +
Sbjct: 57 KTASFAIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAI 114
Query: 679 -PRGSKITD-HILIGTPGKMFD 738
P+ + + +I++GTPG++ D
Sbjct: 115 YPQIKALKNANIVVGTPGRILD 136
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/77 (31%), Positives = 46/77 (59%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
+E+L L P LLK + +G++ PS +Q ++P +L +N++ +S++GTGKTA
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGG--KNLLVRSKNGTGKTASYIVPML 167
Query: 530 AELTLTRIILKYCVLVP 580
+ + + ++ +LVP
Sbjct: 168 NMINSSELSIQGIILVP 184
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K S+++ ML+ ++S++ Q + L P ELA+Q +M++ I V G +
Sbjct: 158 KTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAP-VVGGTSM 216
Query: 679 PRGS-KITD--HILIGTPGKMFD 738
++++ H+++GTPG++ D
Sbjct: 217 QDDIIRVSNGVHVMVGTPGRIVD 239
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+R + PQVL L+PT ELA Q +K +K+ G +
Sbjct: 56 KTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDF 115
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K ++GTPG++ D
Sbjct: 116 GSQFRALKQGPQWVVGTPGRVMD 138
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +L L NLL+ + G+ PS IQE ++P LL ++++ +Q+GTGKTA
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEG--KDVLGLAQTGTGKTA 58
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKY--AVRG 669
K +F + +L R+ + P L + PT ELAIQ + +AK + Y A G
Sbjct: 70 KTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMG 129
Query: 670 EELPRGSKITDHILIGTPGKMFD 738
E+L + + I++GTPG+++D
Sbjct: 130 EQLQK-LEAGAEIIVGTPGRIYD 151
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
TF L L ++LK + +G+ PS IQE A+P LA ++++ +Q+GTGKT
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAG--RDVLGCAQTGTGKT 52
>UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
ATP-dependent RNA helicase - Methylibium petroleiphilum
(strain PM1)
Length = 516
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+ FE+L L LL V +GF AP+ +QE A+P L + + SQ+G+GKTA
Sbjct: 72 TASNFESLGLAAPLLHAVTQLGFTAPTSVQEQAIPAALKG--GDWMVSSQTGSGKTA 126
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L + +LK + MGF P+++Q A+P +L + +++I S++G+GKTA
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNN--EDLIVMSKTGSGKTA 55
Score = 35.5 bits (78), Expect = 1.5
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK-YAVRGE- 672
K F +++L + + PQ L L+P ELA+Q KMAK+ +K K A+ G+
Sbjct: 53 KTAVFGVSILQLTNPEEAGPQGLILTPARELAVQVDNDIRKMAKY---LKHKTTAIYGQH 109
Query: 673 ELPRGSKITD---HILIGTPGKMFD 738
+ ++I + I+ GTPG++FD
Sbjct: 110 NINLETQILNKGVSIVTGTPGRVFD 134
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S KTFE L L L+ +GF APS IQ +P +L +++IA +++G+GKTA
Sbjct: 2 SDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKG--RDIIASAKTGSGKTA 56
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
FE L +K N+L + MGF IQE A+P LL ++++ Q+ +GTGKT
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTG--RDVVGQAHTGTGKT 53
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 675
K FVLA L +++ S+ N VL + T ELA Q + + +K+ P +K+ G
Sbjct: 91 KTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMA 150
Query: 676 LPRGSKI----TDHILIGTPGKM 732
+ + + T HI++GTPG++
Sbjct: 151 IQKDEETLKSGTPHIVVGTPGRI 173
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 302 EIQRKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 475
E +KD S+ + F LKP +L+ + GF PS++Q +P + +++
Sbjct: 25 EAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDIL 82
Query: 476 AQSQSGTGKTA 508
Q++SG GKTA
Sbjct: 83 CQAKSGMGKTA 93
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/53 (41%), Positives = 38/53 (71%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE + L P LL+ V +G++ P+ IQE A+P LA ++++A++++G+GKTA
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIP--LALEGKDLLARARTGSGKTA 59
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 43.6 bits (98), Expect = 0.006
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--- 669
K SF + + + ++N PQ L L+PT ELA+Q E + +F IK AV G
Sbjct: 52 KTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRF-KRIKAT-AVFGKSS 109
Query: 670 -EELPRGSKITDHILIGTPGKMFD 738
++ K HI++GTPG++ D
Sbjct: 110 FDKQKAELKQKSHIVVGTPGRVLD 133
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/53 (28%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ + ++L+ + +G+ P+K+Q++ +P L ++++ +SQ+G+GKTA
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALER--KDLVVKSQTGSGKTA 54
>UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 600
Score = 43.2 bits (97), Expect = 0.008
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSR-VDSNK-NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K SF++ ++ R ++ +K + Q + + PT ELA+Q E K+ K+ P+ V G
Sbjct: 113 KTLSFLIPIVQRLIELDKTDSTQCVIIVPTRELAVQINEHFKKLIKYLPQFTSLVIVGGM 172
Query: 673 ELPRGSKITDH---ILIGTPGKMFD 738
+P+ ++ I+IGTPG++++
Sbjct: 173 AIPKQVRLLSQEPTIVIGTPGRIYE 197
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L++++ ++ PQ + ++PT ELAIQ + + +K+ G +
Sbjct: 76 KTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135
Query: 679 ---PRGSKITDHILIGTPGKMFD 738
R K HI++GTPG++ D
Sbjct: 136 LDQMRALKSGAHIVVGTPGRVKD 158
Score = 39.9 bits (89), Expect = 0.071
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L L +L + MGF +P+ IQ A+P LL ++ + ++Q+GTGKTA
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTA 78
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE L+L +LK + G+ +P+ IQE ++P LL ++++ +Q+GTGKTA
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQG--KDLLGCAQTGTGKTA 53
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 43.2 bits (97), Expect = 0.008
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L + + Q L L+PT ELAIQ E ++K+ + + G+E
Sbjct: 56 KTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEY 115
Query: 679 PRGSK---ITDHILIGTPGKMFD 738
R K +++GTPG++ D
Sbjct: 116 GRQLKQLRSGAQVVVGTPGRILD 138
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+ F + L K + M F PS IQ +P +L ++ IA +Q+GTGKTA
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQG--RDAIALAQTGTGKTA 58
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L P L++ V A GF P+ IQE ALP LA Q+++ + +GTGKTA
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAG--QDILGLAATGTGKTA 108
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE L L LL + G+ P++IQ A+P +LA ++I +Q+GTGKTA
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAG--HDIIGVAQTGTGKTA 57
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S +F LHL P L + GF P+ IQ A+P LA +++I + +GTGKTA
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAG--KDVIGTAATGTGKTA 56
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L L +LK + G+ PS IQ A+P +L Q+++A +Q+GTGKTA
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEG--QDVMAAAQTGTGKTA 57
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 43.2 bits (97), Expect = 0.008
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA- 660
K SF++ L + + + P VL LSPT ELA+QT EVA A+FC ++ K+
Sbjct: 135 KTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVA---AQFCVKMGYKHVC 191
Query: 661 -VRGEELPRG-SKITDH--ILIGTPGKMFDW 741
GE+ R +K+ H I+ TPG++ D+
Sbjct: 192 IYGGEDRHRQINKLRFHPEIVTATPGRLIDF 222
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +2
Query: 284 ESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPP 463
++++ + P+S S +F L L P LL+ V F P+ +Q A+P LA
Sbjct: 23 DTEVSSAVANATPSSEAASSSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIP--LALEG 80
Query: 464 QNMIAQSQSGTGKTA 508
++++A++++G+GKTA
Sbjct: 81 RDVLAKAKTGSGKTA 95
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L + ++ + +GF AP+ IQ A+P LL+ ++++ QSQ+GTGKTA
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSG--RDVVGQSQTGTGKTA 55
Score = 41.5 bits (93), Expect = 0.023
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV--RGE 672
K +F L +L R+D + Q + L+PT ELAIQ + MA+F L+ G+
Sbjct: 53 KTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDA---MAQFVGNSGLRTLAIYGGQ 109
Query: 673 ELPRGS---KITDHILIGTPGKMFD 738
+ R K HI++GTPG++ D
Sbjct: 110 SIDRQMLQLKRGVHIVVGTPGRVID 134
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L L +L + +GFN P+ IQ+ A+P LL ++++A +Q+GTGKTA
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQG--RDVLAAAQTGTGKTA 55
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF +L L +L V MGF P+ IQ A+P LL ++++ +Q+GTGKTA
Sbjct: 46 TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLL--ELRDVVGIAQTGTGKTA 97
Score = 37.9 bits (84), Expect = 0.29
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+ VD+++ Q L L+PT ELA+Q+ + A + + G
Sbjct: 95 KTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGS-- 152
Query: 679 PRGSKI-----TDHILIGTPGKMFD 738
P G +I +++GTPG++ D
Sbjct: 153 PYGPQIGALKRGAQVVVGTPGRVID 177
>UniRef50_Q4Q0X4 Cluster: ATP-dependent RNA helicase-like protein;
n=3; Leishmania|Rep: ATP-dependent RNA helicase-like
protein - Leishmania major
Length = 964
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 565 LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILIGTPGKMF 735
L +SPT ELA+Q ++ KF P++ + V G R ++ + HILI TPG+++
Sbjct: 336 LIISPTRELALQIDAAIRQLTKFAPQVVVGCVVGGMAQERQQRVLNRHPHILICTPGRLW 395
Query: 736 D 738
D
Sbjct: 396 D 396
>UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyces
cerevisiae ATP-dependent RNA helicase MAK5; n=1;
Yarrowia lipolytica|Rep: Similarities with sp|P38112
Saccharomyces cerevisiae ATP-dependent RNA helicase MAK5
- Yarrowia lipolytica (Candida lipolytica)
Length = 998
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/53 (33%), Positives = 37/53 (69%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
T L +L++G+YA+G+ +P++IQ+ ++P +LA ++I ++ +G+GKT
Sbjct: 358 TLNGEQLNYSLIQGLYALGYKSPTEIQKKSIPPILAG--DDVIGKASTGSGKT 408
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +2
Query: 308 QRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 487
++ N L S K+F+A L +L+G+ ++GF P+ IQ +P L ++++ +
Sbjct: 293 EKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG--KDVVGGAV 350
Query: 488 SGTGKT 505
+G+GKT
Sbjct: 351 TGSGKT 356
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ +L +L+K + MGF + IQ +P L++ +++I Q+Q+GTGKTA
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSN--KDVIGQAQTGTGKTA 55
Score = 37.5 bits (83), Expect = 0.38
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ +++ Q + ++PT ELAIQ E K+ + K+ G+++
Sbjct: 53 KTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ-DKRAKVLPIYGGQDI 111
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K +I++GTPG++ D
Sbjct: 112 GRQIRALKKNPNIIVGTPGRLLD 134
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FVLA L +++ VL + T ELA Q + + +K+ P +K+ G +
Sbjct: 94 KTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
Query: 679 PRGSKI----TDHILIGTPGKM 732
+ ++ H+++GTPG++
Sbjct: 154 KKDEEVLKKNCPHVVVGTPGRI 175
Score = 40.3 bits (90), Expect = 0.053
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 484
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 88
Query: 485 QSGTGKTA 508
+SG GKTA
Sbjct: 89 KSGMGKTA 96
>UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Saccharomycetaceae|Rep: ATP-dependent RNA helicase DBP7
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 798
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 499
N+PL TF+ L L L + ++ F AP+K+Q + +P+L+A +++ ++Q+G+G
Sbjct: 154 NAPLKDATTFDGLGLNDKLATHLTESLRFKAPTKVQRSVIPSLIA-TQRDLFVKAQTGSG 212
Query: 500 KT 505
KT
Sbjct: 213 KT 214
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ L + ++ + +GF AP++IQE + T A+ QN++ +Q+GTGKTA
Sbjct: 3 FQELDIDDKIINNLKKIGFEAPTQIQELVIST--ANKNQNILGCAQTGTGKTA 53
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+KTF + +++KG+ +GF+ + +QE +P +L + +++ +Q+GTGKTA
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVL-NRQTDLVGLAQTGTGKTA 55
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 320 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 499
P + TF L L P + K + G+ +P+ IQ A+P LA ++++ +Q+GTG
Sbjct: 3 PRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAG--RDVLGIAQTGTG 60
Query: 500 KTA 508
KTA
Sbjct: 61 KTA 63
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L L LL+ + ++PS+IQ+ A+P +L + +N++ +Q+GTGKTA
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVIL-NSTKNVVGVAQTGTGKTA 54
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L +++ + QVL L PT EL Q + +++ I + G+++
Sbjct: 52 KTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKI 111
Query: 679 PRGSKITD---HILIGTPGKMFD 738
K + HIL+ TPG++ D
Sbjct: 112 EEQIKKLETPKHILVATPGRLLD 134
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F+ LKP +L+ ++ G P+ IQ ALP LA +++I Q+++GTGKT
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALP--LALEGKDLIGQARTGTGKT 52
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE L +L + G+ P++IQ+ LP L+ +++IAQ+Q+GTGKTA
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTD-KDLIAQAQTGTGKTA 71
Score = 39.5 bits (88), Expect = 0.093
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKN-YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 675
K +F + +L R+D N + + + ++PT ELA+Q E K K +K+ G+
Sbjct: 69 KTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFE-ELKSLKGTKRVKITTLYGGQS 127
Query: 676 LPRGSKITDH---ILIGTPGKMFD 738
L + K + I++GTPG++ D
Sbjct: 128 LEKQFKDLEKGVDIVVGTPGRIID 151
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K+ +F+L ++ +DS PQ + ++PT ELA Q + A +++F + +K + G ++
Sbjct: 54 KSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDI 113
Query: 679 PRGSK---ITDHILIGTPGKMFD 738
+ + ++IGTP ++ D
Sbjct: 114 EKDRQRCNAQPQLIIGTPTRIND 136
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
FE +L+ +L+ V + F P++IQ +P +L N+I QSQ+GTGK+
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRT--NLIGQSQTGTGKS 55
>UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07723 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 42.3 bits (95), Expect = 0.013
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRV-----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 654
K +F+L +L R+ D N + L +SPT ELA+Q VA K+ K+CP+++++
Sbjct: 110 KTLAFLLPILERLAKKPSDFNHAITRALVISPTRELAVQIFNVAEKLVKYCPKLRIQ 166
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ LKP LL+ + GF PS++Q+ +P + +++ Q++SG GKTA
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITG--TDILCQAKSGMGKTA 107
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 42.3 bits (95), Expect = 0.013
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 311 RKDPNSPLYSVKT---FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 481
RK+ N+P S K F+A+ L LLK + GF P+ IQ A+P +L +++
Sbjct: 64 RKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQG--DDVVGM 121
Query: 482 SQSGTGKTA 508
+++G+GKTA
Sbjct: 122 ARTGSGKTA 130
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/54 (31%), Positives = 37/54 (68%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F+ +L ++LK + G++ P+ IQ ++P ++ + ++++A +Q+GTGKTA
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLN--KHVLASAQTGTGKTA 53
Score = 36.7 bits (81), Expect = 0.66
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNY---PQVLCLSPTYELAIQTGEVAAKMAKF--CPEIKLKYAV 663
K +FVL +L ++ N++ P+VL +SPT ELA Q + K +++ I + +
Sbjct: 51 KTAAFVLPILDKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGI 110
Query: 664 R-GEELPRGSKITDHILIGTPGKMFD 738
G + SK D IL+ TPG++ D
Sbjct: 111 SYGLQNRMFSKPID-ILVATPGRLLD 135
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L L LL+ V +G+ P+ +Q A+P++L +++IA +Q+GTGKTA
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLM--MRDLIAVAQTGTGKTA 53
Score = 34.7 bits (76), Expect = 2.7
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 669
K SFVL M+ + + P+ L L PT ELA Q E K K+ ++ + + G
Sbjct: 51 KTASFVLPMIDILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKY-HKLSMSLLIGG 109
Query: 670 EELPRGSKITD---HILIGTPGKMFD 738
+ + +LI TPG++ D
Sbjct: 110 VPMAEQQAALEKGVDVLIATPGRLLD 135
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 359 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
L +KP L + +GF AP+ IQE A+P +L +++IA+S +GTGKT
Sbjct: 15 LKMKPFLQETWNRVGFTAPTPIQEEAIPLILEG--KDLIAESPTGTGKT 61
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/57 (31%), Positives = 37/57 (64%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
++ F+ L L +L+ + +G+ AP+ +Q ++P +L ++++A +Q+GTGKTA
Sbjct: 44 NLPAFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEG--RDLLAAAQTGTGKTA 98
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 538 DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS--KITDHIL 711
+ N P +L ++PT ELA Q EVA K+A + + P+ + K IL
Sbjct: 133 EGNGRGPVMLVITPTRELAQQIDEVAGKIADVTGHVAVTVVGGVSYKPQTAALKYGCDIL 192
Query: 712 IGTPGKMFD 738
+ TPG++ D
Sbjct: 193 VATPGRLVD 201
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 41.9 bits (94), Expect = 0.018
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L+ +D PQ L L PT ELA Q E + +++ G ++
Sbjct: 59 KTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADM 118
Query: 679 PRGSKIT---DHILIGTPGKMFD 738
+ K HI++ TPG++ D
Sbjct: 119 RQQLKSLREGTHIVVATPGRLLD 141
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F+++ L NLLK + GFN P+ IQ ++P +L +++ +++G+GKT
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMIL--DGHDIVGMARTGSGKT 281
>UniRef50_A3H8H5 Cluster: DEAD/DEAH box helicase-like; n=1;
Caldivirga maquilingensis IC-167|Rep: DEAD/DEAH box
helicase-like - Caldivirga maquilingensis IC-167
Length = 926
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V +FE LH P + + V +G+ P+K+QE A+P +L ++ + S +GTGKT
Sbjct: 3 VNSFELLH--PKVKEAVKELGYEKPTKVQELAIPIVLTG--EHTLISSPTGTGKT 53
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ L L ++K + MGF + IQ +P L + +++I Q+Q+GTGKTA
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQN--KDVIGQAQTGTGKTA 54
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + ++ +V+ + Q L ++PT ELAIQ E K+ +++ G+++
Sbjct: 52 KTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDI 110
Query: 679 P---RGSKITDHILIGTPGKMFD 738
R K H+++GTPG++ D
Sbjct: 111 ERQIRALKKHPHVIVGTPGRIID 133
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FVLA L +++ VL + T ELA Q + + +K+ P +K+ G +
Sbjct: 95 KTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSI 154
Query: 679 PRGSKI----TDHILIGTPGKM 732
+ ++ HI++GTPG++
Sbjct: 155 KKDEEVLKKNCPHIVVGTPGRI 176
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 484
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 485 QSGTGKTA 508
+SG GKTA
Sbjct: 90 KSGMGKTA 97
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
VKTF L ++ L+K +G+ PSKIQ ALP L +++I +Q+G+GKT
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEG--KDVIGLAQTGSGKT 60
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 41.9 bits (94), Expect = 0.018
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE+L L +L+G+ A GF PS +Q A+P L ++I Q++SGTGKT
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 530 AELTLTRIILKYCVLVP 580
L L + + +L P
Sbjct: 122 DSLVLENLSTQILILAP 138
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V +F L L+P LL+G+ + +P+ +Q A+P LA ++++A+S +GTGKT
Sbjct: 46 VASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIP--LALQGRDILARSGTGTGKT 98
>UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Pichia stipitis (Yeast)
Length = 733
Score = 41.9 bits (94), Expect = 0.018
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 499
N+P+ TFE L + L K + + F P+K+Q++ +PT+L+ +++ ++Q+G+G
Sbjct: 137 NAPVEDASTFEGLGINERLSKHLTETLRFKNPTKVQKSVIPTMLS-TERDLFIKAQTGSG 195
Query: 500 KT 505
KT
Sbjct: 196 KT 197
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+++ L LL+ ++ GF AP+ IQ +P LL ++++ +++G+GKTA
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEG--RDVVGMARTGSGKTA 121
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 41.5 bits (93), Expect = 0.023
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +++L ML++ + Q L L+PT ELA+Q EV AK I + + G +
Sbjct: 52 KTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEV-AKQLTATTSITVLPLIGGANI 110
Query: 679 PRG----SKITDHILIGTPGKMFD 738
R K H+ +GTPG++ +
Sbjct: 111 KRQVEKLKKKKPHVAVGTPGRILE 134
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 380 LKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
L+ + G P++IQ+ +P L QN+I SQ+GTGKT
Sbjct: 14 LEALTNQGITEPTEIQQQVIPEALDG--QNLIVHSQTGTGKT 53
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 41.5 bits (93), Expect = 0.023
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + + ++ + Q L L PT EL IQ E K+ K+ ++ G+E+
Sbjct: 59 KTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEI 118
Query: 679 PRGSKI---TDHILIGTPGKMFD 738
R + I+I TPG+M D
Sbjct: 119 ERQLRALRKNPQIVIATPGRMMD 141
Score = 39.9 bits (89), Expect = 0.071
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L+L + + MGF S IQ A+P +L +++I +Q+GTGKTA
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKG--KDIIGHAQTGTGKTA 61
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L L +L V A G+ P+ IQE A+P +LA ++++ +Q+GTGKTA
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLA--RKDVLGIAQTGTGKTA 53
Score = 33.5 bits (73), Expect = 6.1
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 669
K +FVL ML+ ++ + P+ L L PT ELA Q E + ++ + + G
Sbjct: 51 KTAAFVLPMLTILEKGRARARMPRTLILEPTRELAAQVKENFDRYGA-GQKLNVALLIGG 109
Query: 670 EEL-PRGSKITD--HILIGTPGKMFDWGVKFGML 762
+ +K+T +LI TPG++ D + G+L
Sbjct: 110 VSFGDQDAKLTRGVDVLIATPGRLLDHTERGGLL 143
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 41.5 bits (93), Expect = 0.023
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV----AAKMAKFCPEIKLKYAVR 666
K +F L L+++D++ QVL ++PT ELAIQ E AAKM A
Sbjct: 58 KTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPF 117
Query: 667 GEELPRGSKITDHILIGTPGKMFD 738
G ++ + K I++GTPG++ D
Sbjct: 118 GPQV-KALKQGTAIVVGTPGRLID 140
Score = 38.3 bits (85), Expect = 0.22
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F + L +L+ + AM F P+ IQ A+P LL Q+++ ++Q+GTGKTA
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEG--QDVLGEAQTGTGKTA 60
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 41.5 bits (93), Expect = 0.023
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE L L P LL + ++ P+ IQ A+P +L ++++A + +GTGKTA
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLS--KDVLAGAATGTGKTA 53
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 41.5 bits (93), Expect = 0.023
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K ++ L +L R+ + +PQ + L+P+ EL +Q +V K E++ + G +
Sbjct: 54 KTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDW-KAGSELRAASLIGGANV 112
Query: 679 PR---GSKITDHILIGTPGKMFD 738
+ K HI++GTPG++F+
Sbjct: 113 KKQVEKLKKHPHIIVGTPGRVFE 135
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 41.5 bits (93), Expect = 0.023
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F L L P +LK + +NAP IQE A+P +L ++++ +Q+G+GKTA
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKG--KDILGIAQTGSGKTA 61
Score = 35.9 bits (79), Expect = 1.2
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSN---KN-YPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAV 663
K SFVL +L + + KN + L L PT ELA+Q G+V + P +IK
Sbjct: 59 KTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVY 118
Query: 664 RGEEL-PRGSKITD-HILIGTPGKMFD 738
G + P+ ++ ILI TPG++ D
Sbjct: 119 GGVSINPQMIQLQGVEILIATPGRLLD 145
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 41.5 bits (93), Expect = 0.023
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F +L L + K V G++ PS IQ A+P +L ++++A +Q+GTGKTA
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTG--KDVMAAAQTGTGKTA 53
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 41.5 bits (93), Expect = 0.023
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
TF L L+ +LKG+ G+ PS IQ A+P L ++IAQ++SGTGKT
Sbjct: 44 TFSELLLQKEVLKGLEDGGYQRPSPIQLKAIP--LGISGVDLIAQAKSGTGKT 94
Score = 34.7 bits (76), Expect = 2.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 556 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 669
P VL ++PT E+A+Q +V ++K+C IK + + G
Sbjct: 150 PLVLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGG 187
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 41.5 bits (93), Expect = 0.023
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F +L LK LL G+ GF + +QE A+P +LA ++++A++++GTGKT
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILA--RRDVVARAKNGTGKT 72
Score = 39.5 bits (88), Expect = 0.093
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI--KLKYAVRGE 672
K SF++ +L V+ K++ Q L L T ELA+QT +VA ++K P++ ++ A+ G
Sbjct: 71 KTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGV 130
Query: 673 ELPRG---SKITDHILIGTPGKM 732
+ ++ +++ TPG++
Sbjct: 131 SIAEDRERAREKPLVVLATPGRL 153
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 41.5 bits (93), Expect = 0.023
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 VKTFEALHLK-PNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V TFE + P++L+ + MGF+ PS IQ A P LL +MI +Q+GTGKT
Sbjct: 281 VWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQG--HDMIGIAQTGTGKT 334
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 41.5 bits (93), Expect = 0.023
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V + + L P +L G+ A+G+ P++IQE LP L ++++A++++G+GKT
Sbjct: 10 VVQWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKG--KDILAKARTGSGKT 62
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 559 QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFD 738
+ L + PT EL Q V ++ C ++ Y + G E+ + I+ I+IGTPG++ +
Sbjct: 80 RALIIGPTRELCSQIEAVVRELCVKCLDVVSIYEL-GSEVETEADISASIVIGTPGRILN 138
>UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 670
Score = 41.5 bits (93), Expect = 0.023
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQ----VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 666
K +F++ + + + + PQ +L ++PT ELA Q + A+++ K P K+ +A+
Sbjct: 129 KTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQIAKEASQLLKNLPNYKVGFAIG 188
Query: 667 GEELPRGSK-ITD--HILIGTPGKMFD 738
G K I + +ILI TPG++FD
Sbjct: 189 GTNKTTEEKNILNGCNILIATPGRLFD 215
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+FEA L LL+ VY+ GF+APS IQ + P +A ++++A +++G+GKT
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWP--IAMQNRDIVAIAKTGSGKT 212
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
FE+L L +L+G+ A GF PS +Q A+P L ++I Q++SGTGKT
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKT 114
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+++F+ L L NL++G+ G N P+ IQ +P L + +++I QS +G+GKT
Sbjct: 2 IESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALEN--KDVIGQSPTGSGKT 54
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 41.1 bits (92), Expect = 0.031
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ L +LK + G+ P+ IQ A+P +L+ ++++ +Q+GTGKTA
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSG--RDVMGAAQTGTGKTA 63
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 41.1 bits (92), Expect = 0.031
Identities = 21/62 (33%), Positives = 40/62 (64%)
Frame = +2
Query: 323 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 502
+ P S +F L L ++L + +G+ + IQ+ ALP +LA+ +++IA++++G+GK
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAE--KDLIAKAKTGSGK 86
Query: 503 TA 508
TA
Sbjct: 87 TA 88
Score = 37.1 bits (82), Expect = 0.50
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L ++ Q L L PT ELA K+A+F +K+ G+ +
Sbjct: 86 KTAAFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPI 145
Query: 679 -PRGSKITD--HILIGTPGKMFD 738
P+ + H+++ TPG++ D
Sbjct: 146 GPQIGSLEHGAHVVVRTPGRIKD 168
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 41.1 bits (92), Expect = 0.031
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK-FCPEIKLKYAVRGEE 675
K +++L ++ ++D +KN Q + LSPT+EL +Q V + + +I V
Sbjct: 52 KTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGN 111
Query: 676 LPRGS---KITDHILIGTPGKMFD 738
+ R K HIL+GT G++ +
Sbjct: 112 IKRQMEKLKNKPHILVGTTGRILE 135
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F L L +LK + +G P+ IQE A+P +L +N+I ++++GTGKT
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKG--KNVIGKAETGTGKT 53
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 41.1 bits (92), Expect = 0.031
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ-TGEVAAKMAKFCPEIKLKYAVRGEE 675
K SF + +L+RV + Q L L PT ELA+Q T E+++ + ++ Y + E
Sbjct: 54 KTASFGIPILNRVIKGEGL-QALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIE 112
Query: 676 LP-RGSKITDHILIGTPGKMFD 738
L R + I++GTPG++ D
Sbjct: 113 LQLRSLRRNPEIIVGTPGRLMD 134
Score = 40.7 bits (91), Expect = 0.040
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S + F ++ LK +LL+ + GF P+ IQ ++P +A +++ Q+Q+GTGKTA
Sbjct: 2 SFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAG--LDLMGQAQTGTGKTA 56
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 41.1 bits (92), Expect = 0.031
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + + D N PQ + ++PT ELA Q K+A + +K+ G L
Sbjct: 53 KTLAFGIPAVMGTDVKSNKPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPL 112
Query: 679 -PRGSKITD--HILIGTPGKMFD 738
+ + HILIGTPG++ D
Sbjct: 113 RAQADSLAKGAHILIGTPGRIQD 135
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 41.1 bits (92), Expect = 0.031
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE+++L + K + GFN P+ IQ A+P +L ++++A S++G+GKTA
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEG--RDVVACSRTGSGKTA 351
>UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 528
Score = 41.1 bits (92), Expect = 0.031
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 368 KPNLLKGVYAMG-FNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
K + ++ +Y G PS IQ A+P LL +PP++++AQ+ +G GKT
Sbjct: 66 KIDAIQSIYMKGNIQHPSYIQTRAIPYLLENPPKSILAQASTGEGKT 112
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 41.1 bits (92), Expect = 0.031
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +2
Query: 305 IQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 484
++ K P+ TFE++ L+ LL+G+ A GF P ++Q+ AL L+ ++++ Q+
Sbjct: 10 VEWKTNEEPIIQ-STFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQG--RDVVIQN 66
Query: 485 QSGTGKT 505
TGKT
Sbjct: 67 FRSTGKT 73
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 41.1 bits (92), Expect = 0.031
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+A+ L P+LL+ + GF P+ IQ ++P +L ++++ +++G+GKTA
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLIL--DRRDVVGMARTGSGKTA 142
Score = 34.3 bits (75), Expect = 3.5
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRV--DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +FV+ M+ R+ S + + L +SP+ ELA+QT +V + K ++K V G+
Sbjct: 140 KTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGK-GTDLKTVLLVGGD 198
Query: 673 ELPR--GSKITD-HILIGTPGKMFDWGVKFGM 759
L G T+ I+I TPG+ V+ +
Sbjct: 199 SLEDQFGFMTTNPDIIIATPGRFLHLKVEMSL 230
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 40.7 bits (91), Expect = 0.040
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F LK +LL+ V GF PS++Q +P + ++++ Q+++GTGKTA
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHG--KDVLCQAKAGTGKTA 90
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +2
Query: 290 KLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQN 469
K+ +E KD +F+ + LK +++ + GF PS++Q +P L Q+
Sbjct: 18 KMQVEPSNKDT---YVGTVSFQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALL--RQD 72
Query: 470 MIAQSQSGTGKTA 508
++ Q++SG GKTA
Sbjct: 73 ILCQAKSGMGKTA 85
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 40.7 bits (91), Expect = 0.040
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 514 VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 693
V+ L ++ + P L L+PT ELAIQ E A ++ + P + V G LP
Sbjct: 229 VMRALQSESASPSCPACLILTPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLH 288
Query: 694 ITDH---ILIGTPGKMFD 738
H I+IGTPG++ +
Sbjct: 289 RLKHNIKIVIGTPGRLLE 306
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 40.7 bits (91), Expect = 0.040
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQT-GEV--AAKMAKFCPEIKLKYAVRG 669
K +F+L + ++S+K Q + +PT ELA Q GEV +A E K V G
Sbjct: 51 KTHAFLLPLFHGLESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGG 110
Query: 670 ---EELPRGSKITDHILIGTPGKMFDWGVKFGML 762
+++ K HI++GTPG++ D VK G L
Sbjct: 111 TDKQKMTEKLKTPPHIIVGTPGRILDL-VKSGAL 143
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 40.7 bits (91), Expect = 0.040
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 368 KPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC*AELTLT 547
K + K + AMG + P+KIQ+ A+P LL +N+I + +GTGKT L
Sbjct: 9 KEFIAKTLKAMGIHEPTKIQKEAIPPLLKQ--KNLIGVAPTGTGKTLAFLLPILQNLDFA 66
Query: 548 RIILKYCVLVP 580
+ +++ ++VP
Sbjct: 67 QNLIQAVIIVP 77
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 40.7 bits (91), Expect = 0.040
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F +L L + K V G++ PS IQ A+P +L ++++A +Q+GTGKTA
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTG--KDVMAAAQTGTGKTA 53
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 40.7 bits (91), Expect = 0.040
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDS--NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F + ++ R++ N PQ L L+PT ELA+Q + AK+ I + G+
Sbjct: 54 KTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLT-HGQRINVVAVYGGK 112
Query: 673 EL---PRGSKITDHILIGTPGKMFD 738
L K HI++GTPG++ D
Sbjct: 113 PLRSQMEKLKRAPHIVVGTPGRVID 137
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 40.7 bits (91), Expect = 0.040
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +L L L+ + A G+ P+ IQ A+P LA +++A +Q+GTGKTA
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAG--HDLLAAAQTGTGKTA 81
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 40.7 bits (91), Expect = 0.040
Identities = 19/54 (35%), Positives = 36/54 (66%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TFE++ L +L+ + MGF PS +Q ++P L ++++A++++G+GKTA
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQG--KDILAKARTGSGKTA 75
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 484
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 485 QSGTGKTA 508
+SG GKTA
Sbjct: 90 KSGMGKTA 97
>UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 568
Score = 40.7 bits (91), Expect = 0.040
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 523 MLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGSK 693
+L R S N VL +SPT ELA+Q + A + + P+ K+ A+ G + R
Sbjct: 140 LLRRPSSRGNDVSVLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRIL 199
Query: 694 ITDHILIGTPGKMFD 738
ILIGTPG++ D
Sbjct: 200 RGCQILIGTPGRLMD 214
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 40.7 bits (91), Expect = 0.040
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F++ + R +K + VL + PT ELA+QT VA +++ + Y E
Sbjct: 54 KTAAFLIPAIQRALGSKFFNTVLIILPTRELALQTYSVALNISRNFFRTTVVYGGSSMEK 113
Query: 679 PRGSKITDHILIGTPGKMFD 738
I+IGTPG++ D
Sbjct: 114 QIHDLRDSKIIIGTPGRIID 133
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + +L +++ + PQ L + PT EL +Q E ++ K+ ++K+ G+ +
Sbjct: 54 KTAAFAIPVLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYM-KVKVLAVYGGQSI 111
Query: 679 PRGSKITD-----HILIGTPGKMFD 738
G++I H+++ TPG++ D
Sbjct: 112 --GNQIAQLRRGVHVIVATPGRLID 134
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 40.7 bits (91), Expect = 0.040
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L + P L+ + N P+ IQ+ A+P L QN+I S +GTGKTA
Sbjct: 4 TFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQH--QNLIVHSPTGTGKTA 55
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 40.7 bits (91), Expect = 0.040
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
++ FE L P LLK + G++ P+ IQ A+P + + +++ + +GTGKTA
Sbjct: 2 NLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEE--SDVLGSAPTGTGKTA 56
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F LKP LL+ + GF PS++Q +P + ++I Q++SG GKTA
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTA 98
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FVL+ L +++ + L L T ELA Q + + + P+ K+ G +
Sbjct: 96 KTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 679 PRGSKI----TDHILIGTPGKM 732
+ HI++GTPG++
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRV 177
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF L L P L++ V F P+ +Q A+P LA Q+++ ++++G+GKTA
Sbjct: 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAG--QDVLCKAKTGSGKTA 147
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+A+ L NLL+ + GF+ P+ IQ +P +L ++++ +++G+GKTA
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVL--ERRDVVGMARTGSGKTA 138
Score = 33.5 bits (73), Expect = 6.1
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +FV+ M+ R+ ++ + + +SP+ ELA+QT +V ++ K ++K V G+
Sbjct: 136 KTAAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGK-GTDLKTVLLVGGD 194
Query: 673 ELPRGSKI---TDHILIGTPGKMFDWGVKFGM 759
L + I+I TPG+ V+ +
Sbjct: 195 SLEEQFGLMAANPDIIIATPGRFLHLKVEMSL 226
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 40.3 bits (90), Expect = 0.053
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F + L LLK V +G++ P+ IQE A+P LA ++++A++++G+GKTA
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIP--LALEGKDLLARARTGSGKTA 58
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 40.3 bits (90), Expect = 0.053
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F AL + LLKGV A G P IQ A+P+ L Q+++ +Q+G+GKTA
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEG--QDILGIAQTGSGKTA 139
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 40.3 bits (90), Expect = 0.053
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
FE + P L +G+ + F P+K+QE +P +L+D +++ Q+ +G+GKT
Sbjct: 5 FEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSD--LSVVVQAATGSGKT 54
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 40.3 bits (90), Expect = 0.053
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+FE L + LL + +G+ P+ IQ A+P +LA ++ A +Q+GTGKTA
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILA--KSDVFATAQTGTGKTA 53
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 40.3 bits (90), Expect = 0.053
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F L +L ++ +++ + L L PT ELA+Q + +AK +K+ G +
Sbjct: 79 KTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKH-KGLKIAAIYGGASM 137
Query: 679 PRGSKITDH---ILIGTPGKMFD 738
+ + I++GTPG++FD
Sbjct: 138 KQQEDALEEGTPIIVGTPGRVFD 160
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 40.3 bits (90), Expect = 0.053
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F+ L LK +L +Y G+ P+ IQ +L +L Q+ + ++++GTGKTA
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQG--QDALVRAKTGTGKTA 57
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + L + + +PQVL L+P EL Q + K+ K ++ G +L
Sbjct: 55 KTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL 114
Query: 679 PRGSKITDH---ILIGTPGKMFD 738
G K + H ++ TPG++ D
Sbjct: 115 -SGVKKSLHGAQVISATPGRLID 136
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 40.3 bits (90), Expect = 0.053
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
V +F+ L + ++ +G+ G P+ IQ+ A+P L + +++I QSQ+G+GKT
Sbjct: 2 VTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKN--KDIIGQSQTGSGKT 54
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 600
K +++L + ++DS+K Q L L+PT+EL +Q
Sbjct: 53 KTLAYLLPIFQKIDSSKRETQALILAPTHELVMQ 86
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 40.3 bits (90), Expect = 0.053
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F +L+ +L+ + + GF +PS +Q A+P L +++I Q++SG GKTA
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEH--KDVICQAKSGKGKTA 180
>UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 940
Score = 40.3 bits (90), Expect = 0.053
Identities = 17/52 (32%), Positives = 36/52 (69%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+ + +L P +LKG+ ++GF+ P++IQ + +P ++ ++I +Q+G+GKT
Sbjct: 296 WNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSS-GYDVIGAAQTGSGKT 346
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 40.3 bits (90), Expect = 0.053
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F++ +L+ LL + GF+ P+ IQ A+P +L +++A +++G+GKTA
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQG--NDVVAMARTGSGKTA 74
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 40.3 bits (90), Expect = 0.053
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F+ ++L LLK + AMGF P+ IQ+ +P L +++ A + +GTGKTA
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTA 270
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 40.3 bits (90), Expect = 0.053
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 517 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRG 687
L L+ + NK+ P+VL +SPT ELAIQT E + + +K G E R
Sbjct: 224 LQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQ-GTNLKAVVVYGGAPKSEQARA 282
Query: 688 SKITDHILIGTPGKMFD 738
+K ++IGTPG++ D
Sbjct: 283 AK-NASVIIGTPGRLLD 298
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 39.9 bits (89), Expect = 0.071
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--E 672
K F + L +D + QV+ L+PT E+AIQ EV A + +K++ + G
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAM 133
Query: 673 ELPRGSKITDHILIGTPGKM 732
++ R HI IG PG++
Sbjct: 134 DIDRKKLSNCHIAIGAPGRV 153
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF + L +L G+ GF+ PS IQ ++P L ++I +++SGTGKTA
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIP--LGRCGFDLIVRAKSGTGKTA 76
>UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=2; Enterococcus|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 433
Score = 39.9 bits (89), Expect = 0.071
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +++L +L V+ + Q+L ++P+ ELA+Q EVA AK ++K++ + G +
Sbjct: 50 KTLAYMLPLLLTVEKGQGN-QLLIIAPSQELAMQIAEVARTWAKPL-QLKVQTLIGGANV 107
Query: 679 PR---GSKITDHILIGTPGKMFD 738
R K +LIGTPG++ +
Sbjct: 108 SRQIDKLKKRPEVLIGTPGRILE 130
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 39.9 bits (89), Expect = 0.071
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F+ L L P + + V GF PS IQ +P L +++I Q+++GTGKTA
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNG--KDVIGQARTGTGKTA 96
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F + +L ++DS ++ PQ + + PT ELA Q A ++A+ P ++ G+
Sbjct: 94 KTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVP-TEIAVLSGGK 152
Query: 673 ELPRGSKITDH---ILIGTPGKMFD 738
+ R + ++ +++GTPG++ D
Sbjct: 153 NMNRQLRQLENGTQLVVGTPGRVHD 177
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 39.9 bits (89), Expect = 0.071
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K SFVL +L +++ NK Q + ++PT ELA+Q + + + G ++
Sbjct: 51 KTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADM 110
Query: 679 -PRGSKITD-HILIGTPGKMFD 738
+ ++ D I++GTPG++ D
Sbjct: 111 RDQIKRLKDSQIVVGTPGRVND 132
Score = 37.5 bits (83), Expect = 0.38
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
TF+ L L +L + FN ++IQ A+P L +N+ +S +GTGKTA
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEG--KNIFGKSSTGTGKTA 53
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 39.9 bits (89), Expect = 0.071
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S + F L L P LL+ + G+ P+ IQ ++P LL ++++ +Q+GTGKTA
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEG--RDLLGLAQTGTGKTA 59
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 39.9 bits (89), Expect = 0.071
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
S +F L L P L + +G+ P+ IQ A+P +L +++A++Q+GTGKTA
Sbjct: 2 SASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRG--DDLLAEAQTGTGKTA 56
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 39.9 bits (89), Expect = 0.071
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE-- 672
K +++L + ++D++K Q L L+PT+EL +Q +AK A+ GE
Sbjct: 52 KTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVN 111
Query: 673 ---ELPRGSKITDHILIGTPGKMFD 738
++ + HI+IG+ G++ D
Sbjct: 112 IQKQIKNIKAVKPHIVIGSCGRVLD 136
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+ TFE L + L+ G+ +P+++Q + ++ + ++++ SQ+GTGKT
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQN--KDLLINSQTGTGKT 53
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 39.9 bits (89), Expect = 0.071
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 302 EIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 481
E +++ P F L L ++K + +G+ P+ IQ A+P +L ++++
Sbjct: 89 EKKKQRVEQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNS--KDLVGL 146
Query: 482 SQSGTGKTA 508
+Q+GTGKTA
Sbjct: 147 AQTGTGKTA 155
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 39.9 bits (89), Expect = 0.071
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
F L+L ++K + MGF S+IQ LP L ++I Q+Q+GTGKTA
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLG--YDIIGQAQTGTGKTA 123
Score = 33.1 bits (72), Expect = 8.1
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +1
Query: 499 KNCSFVLAMLSR-----VDSNK--NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 657
K +F++AM+S ++ + N+ + L ++PT ELAIQ + A K+ C + +
Sbjct: 121 KTAAFLIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNC-HLNVVT 179
Query: 658 AVRG--EELPRGSKITDH--ILIGTPGKMFDW 741
V G E + + T++ IL+ TPG++ D+
Sbjct: 180 LVGGLSYEKQKIALETENVDILVATPGRLLDF 211
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 39.9 bits (89), Expect = 0.071
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+F++ P + G+ +G++ P+ IQE +P L +++I +Q+GTGKTA
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHAL--DGRDVIGIAQTGTGKTA 53
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 39.9 bits (89), Expect = 0.071
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 559 QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGSKITDHILIGTPGK 729
+VL L P+ ELA+Q V + K+CP I G ++ R K HI+I TPG+
Sbjct: 116 KVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTGGMNIQQQERILKCQPHIVIATPGR 175
Query: 730 MFD 738
+ D
Sbjct: 176 ILD 178
Score = 33.9 bits (74), Expect = 4.6
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +2
Query: 269 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 448
R+ + K DI + +K + +L L LLK + + F + IQ+ +P
Sbjct: 5 RRECITVKADINYLFEGEIKRREKIKMWSSLELSRPLLKALSDLNFVEATLIQKEVIPLA 64
Query: 449 LADPPQNMIAQSQSGTGKTA 508
L+ ++++A++++G+GKTA
Sbjct: 65 LSG--RDIMAEAETGSGKTA 82
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 39.9 bits (89), Expect = 0.071
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+ +F+A L+P +L + G+ P+ +Q+ A+P ++ ++++A +Q+G+GKT
Sbjct: 303 IDSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIM--KKRDLMACAQTGSGKT 355
>UniRef50_A7APA3 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 953
Score = 39.9 bits (89), Expect = 0.071
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
TF AL + +L +G+ G APS+ Q A+ +L Q++I QS+SGTGKT
Sbjct: 10 TFSALGISGSLQEGLKKNGVIAPSRHQYNAIKAIL--DRQDLILQSKSGTGKT 60
>UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2;
Onygenales|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 722
Score = 39.9 bits (89), Expect = 0.071
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSKITDHILIGTPG 726
+ + +SPT ELA Q E A K+A+F ++++ AV G E L + + H+L+GTPG
Sbjct: 168 RAVVISPTRELAEQIAEEAQKIARF-TGVQVRTAVGGTRKIEGLRKIQREGCHLLVGTPG 226
Query: 727 KMFD 738
++ D
Sbjct: 227 RLID 230
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 39.9 bits (89), Expect = 0.071
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 338 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+V TF L L +LL+ + GF P+ IQ A+P L ++++ + +GTGKTA
Sbjct: 2 TVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPAL--DGRDVLGSAPTGTGKTA 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,180,549
Number of Sequences: 1657284
Number of extensions: 15322024
Number of successful extensions: 35579
Number of sequences better than 10.0: 494
Number of HSP's better than 10.0 without gapping: 33836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35279
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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