Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1252
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 61 8e-10
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 53 3e-07
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 53 3e-07
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 51 1e-06
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 50 3e-06
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 49 4e-06
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 48 6e-06
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 48 6e-06
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 42 4e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 41 0.001
03_02_0189 - 6253659-6255380 41 0.001
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 40 0.002
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 40 0.002
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 39 0.004
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 39 0.005
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 38 0.009
08_01_0397 - 3509186-3510291,3510322-3512335 38 0.012
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 38 0.012
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 37 0.016
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 37 0.016
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 37 0.021
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 37 0.021
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 37 0.021
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 36 0.028
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 36 0.037
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 36 0.037
03_05_0865 - 28365430-28367640 36 0.037
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 36 0.037
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 35 0.084
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 35 0.084
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 34 0.15
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 33 0.34
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 33 0.34
05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429 32 0.45
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 31 0.79
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 31 1.0
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 31 1.4
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 31 1.4
02_03_0037 + 14215616-14216941 30 1.8
01_06_0355 + 28657833-28660665,28660762-28661126 30 2.4
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 29 4.2
06_03_1255 + 28780181-28781172,28782065-28782932 29 5.5
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 61.3 bits (142), Expect = 8e-10
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 LVESKLDIEIQRKDPNSPLY-SVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLL 451
L++ + +IQ +Y S FE L L P LLKG++ MGF+ PSKIQ LP +L
Sbjct: 77 LLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMIL 136
Query: 452 ADPPQNMIAQSQSGTGKT 505
P +++IAQ+ +G+GKT
Sbjct: 137 TPPYKDLIAQAHNGSGKT 154
Score = 58.0 bits (134), Expect = 8e-09
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE- 675
K FVL MLSRVD N+ Q +C+ PT ELA Q V +M KF I A+ +
Sbjct: 153 KTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKF-TGITCACAIPPAQK 211
Query: 676 ----LPRGSKITDHILIGTPGKMFDW 741
+ + KITD ++IGT G + W
Sbjct: 212 DYVPIAKMPKITDQVVIGTSGTLMKW 237
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/56 (41%), Positives = 42/56 (75%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+ +F+ + ++ +LL+G+YA GF PS IQ+ A+ +++ +++IAQ+QSGTGKT+
Sbjct: 30 ISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISG--RDVIAQAQSGTGKTS 83
Score = 35.5 bits (78), Expect = 0.048
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K L++ VD+ Q L LSPT ELA QT V + + I++ + G+ +
Sbjct: 81 KTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYI-NIQVHACIGGKSI 139
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+ + H++ GTPG++ D
Sbjct: 140 GEDIRKLEHGVHVVSGTPGRVCD 162
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/56 (41%), Positives = 42/56 (75%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+ +F+ + ++ +LL+G+YA GF PS IQ+ A+ +++ +++IAQ+QSGTGKT+
Sbjct: 30 ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISG--RDVIAQAQSGTGKTS 83
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K L++ VD+ Q L LSPT ELA QT V + F I++ + G+ +
Sbjct: 81 KTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFI-NIQVHACIGGKSI 139
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+ + H++ GTPG++ D
Sbjct: 140 GEDIRKLEHGVHVVSGTPGRVCD 162
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + L ++D KN QV+ L PT ELA+QT +V ++ K+ I++ + G L
Sbjct: 197 KTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIQVMVSTGGTSL 255
Query: 679 PRG-SKITD--HILIGTPGKMFD 738
++ H+L+GTPG++ D
Sbjct: 256 KDDIMRLYQPVHLLVGTPGRILD 278
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE LK LL G+Y GF PS IQE ++P L +++A++++GTGKTA
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 206
Query: 530 AELTLTRIILKYCVLVP 580
++ + ++ +LVP
Sbjct: 207 EKIDPEKNAIQVVILVP 223
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + L ++D +KN QV+ L PT ELA+QT +V ++ K +I++ G L
Sbjct: 174 KTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSL 232
Query: 679 PRG-SKITD--HILIGTPGKMFD 738
++ H+L+GTPG++ D
Sbjct: 233 KDDIVRLYQPVHLLVGTPGRILD 255
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE LK LL G+Y GF PS IQE ++P L +++A++++GTGKTA
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 183
Query: 530 AELTLTRIILKYCVLVP 580
++ + ++ +LVP
Sbjct: 184 EKIDQDKNAIQVVILVP 200
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAPLF*RC* 529
FE LK LL G+Y GF PS IQE ++P L +++A++++GTGKTA
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG--SDILARAKNGTGKTAAFCIPAL 193
Query: 530 AELTLTRIILKYCVLVP 580
++ + ++ +LVP
Sbjct: 194 EKIDQEKNAIQVVILVP 210
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F + L ++D KN QV+ L PT ELA+QT +V ++ K +I++ G L
Sbjct: 184 KTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSL 242
Query: 679 PRG-SKITD--HILIGTPGKMFD 738
++ H+L+GTPG++ D
Sbjct: 243 KDDIIRLYQPVHLLVGTPGRILD 265
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
++F+ + L+ NLL+G+YA GF PS IQ+ + ++I Q+QSGTGKTA
Sbjct: 41 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTA 93
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F +L ++D Q L L+PT ELA Q +V + + +K+ V G +
Sbjct: 91 KTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSV 149
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+I H+++GTPG++FD
Sbjct: 150 REDQRILASGVHVVVGTPGRVFD 172
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 344 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
++F+ + L+ NLL+G+YA GF PS IQ+ + ++I Q+QSGTGKTA
Sbjct: 41 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTA 93
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K +F +L ++D Q L L+PT ELA Q +V + + +K+ V G +
Sbjct: 91 KTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSV 149
Query: 679 PRGSKITD---HILIGTPGKMFD 738
+I H+++GTPG++FD
Sbjct: 150 REDQRILASGVHVVVGTPGRVFD 172
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 332 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
L+S K+FE L L P L+ + G AP+++Q A+P + + + QS +G+GKT
Sbjct: 589 LFSAKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIP--IISQKHDAVIQSYTGSGKT 644
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 305 IQRKDPNSPLYSVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLLADPPQNMIAQ 481
+ +++ L++ +F L L P L + MGF AP++IQ A+P ++ Q+M+ +
Sbjct: 10 VAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSG--QHMLVK 67
Query: 482 SQSGTGKT 505
+ +GTGKT
Sbjct: 68 AATGTGKT 75
>03_02_0189 - 6253659-6255380
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 332 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
L+S K+FE L L P L+ + G + P+++Q A+P + + + QS +G+GKT
Sbjct: 127 LFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIP--IISQKHDAVIQSYTGSGKT 182
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FVL+ L ++D L L T ELA Q + +K+ PE+K+ G +
Sbjct: 86 KTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHI 145
Query: 679 PRGSKI----TDHILIGTPGKM 732
+ + HI++GTPG++
Sbjct: 146 KKHKDLLKNDCPHIVVGTPGRI 167
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 678
K FVL+ L ++D L L T ELA Q + +K+ PE+K+ G +
Sbjct: 73 KTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHI 132
Query: 679 PRGSKI----TDHILIGTPGKM 732
+ + HI++GTPG++
Sbjct: 133 KKHKDLLKNDCPHIVVGTPGRI 154
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 308 QRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 487
+ ++ P TF L + P L+ AMG+ P++IQ A+P L +++I Q
Sbjct: 29 EEQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEG--RDLIGLGQ 86
Query: 488 SGTGKT 505
+G+GKT
Sbjct: 87 TGSGKT 92
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVL--C-LSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 669
K +F L ++ + ++ PQ L C LSPT ELA Q G+ + + V G
Sbjct: 91 KTGAFALPIIQAL-LKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIG-LSCTVLVGG 148
Query: 670 -EELPRGSKITD--HILIGTPGKMFD 738
+ + + + HI++GTPG++ D
Sbjct: 149 VDRVQQAVSLAKRPHIVVGTPGRLLD 174
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
FE++ L + +GV G+ P+ IQ A+P +LA ++ A +++G+GKTA
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG--HDIAAMARTGSGKTA 78
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 347 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
TF++ P +L+ V GF+AP+ IQ + P L + ++++A +++G+GKT
Sbjct: 181 TFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRN--RDIVAVAKTGSGKT 231
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 523 MLSRVDSN-KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 699
+L R+ N ++ P VL LSPT ELA Q + A K + ++ P+G ++
Sbjct: 241 LLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGR---SSRISSVCLYGGAPKGPQLR 297
Query: 700 D-----HILIGTPGKMFD 738
D I++ TPG++ D
Sbjct: 298 DLERGADIVVATPGRLND 315
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 290 KLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQN 469
+L++++ KD P +KT+ L LL + +GF P IQ ALP +++ ++
Sbjct: 409 QLELKVHGKDVPKP---IKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSG--RD 463
Query: 470 MIAQSQSGTGKT 505
I +++G+GKT
Sbjct: 464 CIGIAKTGSGKT 475
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HIL 711
S YP L LSPT EL++Q E A K A + +K+ A G + + + + IL
Sbjct: 397 SRTAYPLALILSPTRELSVQIHEEARKFA-YQTGVKVVVAYGGAPITQQLRELERGVEIL 455
Query: 712 IGTPGKMFD 738
+ TPG++ D
Sbjct: 456 VATPGRLMD 464
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +2
Query: 332 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
L++ K FE + P +K + G+ + +QETALP L ++++ ++++GTGK+A
Sbjct: 338 LFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEG--KDVLVKAKTGTGKSA 394
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/109 (23%), Positives = 54/109 (49%)
Frame = +2
Query: 254 LMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQET 433
L +R GL L ++ + + +++ A + ++L+ +G+ P+++QE
Sbjct: 11 LSTTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQ 70
Query: 434 ALPTLLADPPQNMIAQSQSGTGKTAPLF*RC*AELTLTRIILKYCVLVP 580
+LP LL+ Q+ I +Q+G+GKT + + R ++ V+VP
Sbjct: 71 SLPVLLSG--QDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVP 117
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 36.7 bits (81), Expect = 0.021
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 293 LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNM 472
L++++ KD P +KT+ L LL + +GF P IQ ALP +++ ++
Sbjct: 271 LELKVHGKDVPKP---IKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSG--RDC 325
Query: 473 IAQSQSGTGKT 505
I +++G+GKT
Sbjct: 326 IGIAKTGSGKT 336
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD--HIL 711
S +N V+ L PT ELAIQT VA ++ ++ + L Y + G +L ++ ++L
Sbjct: 154 SPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQ-TLGYVIGGIDLRGEAEQLAKGINVL 212
Query: 712 IGTPGKMFD 738
+ TPG++ D
Sbjct: 213 VATPGRLLD 221
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F+L + + + P + L + PT ELA Q A K+ K+ + ++ + G
Sbjct: 124 KTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGT 183
Query: 673 ELPRGSKITD----HILIGTPGKMFD 738
+LP+ + IL+ TPG++ D
Sbjct: 184 KLPQEQRSMQSNPCQILVATPGRLKD 209
Score = 35.1 bits (77), Expect = 0.064
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +2
Query: 350 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
F+ + P LK + G+ +++QE LP +L ++++A++++GTGKT
Sbjct: 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQG--EDVLAKAKTGTGKT 125
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 KIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKG-VYAMGFNAPSKIQETA 436
+I R ++ K DI I ++ +PL + + + + + L G + +GF P+ IQ A
Sbjct: 117 EIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQA 176
Query: 437 LPTLLADPPQNMIAQSQSGTGKT 505
+P LL+ + A + +G+GKT
Sbjct: 177 IPILLSG--RECFACAPTGSGKT 197
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 556 PQVLCLSPTYELAIQT----GEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTP 723
P+VL L+PT ELA Q E A K++ C + Y V+ L RG +++GTP
Sbjct: 207 PRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGV----DVVVGTP 262
Query: 724 GKMFD 738
G++ D
Sbjct: 263 GRIID 267
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HIL 711
S YP L LSPT EL++Q E A K A + +++ A G + + + + IL
Sbjct: 311 SRTAYPLALILSPTRELSVQIHEEARKFA-YQTGVRVVVAYGGAPIHQQLRELERGVEIL 369
Query: 712 IGTPGKMFD 738
+ TPG++ D
Sbjct: 370 VATPGRLMD 378
>03_05_0865 - 28365430-28367640
Length = 736
Score = 35.9 bits (79), Expect = 0.037
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Frame = +1
Query: 499 KNCSFVLAMLSRVD-----SNKNY---PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 654
K +FVL MLS + S +N P + ++PT ELA Q E K A + IK+
Sbjct: 365 KTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYL-GIKVV 423
Query: 655 YAVRGEEL-PRGSKITD--HILIGTPGKMFD 738
V G+ + +G KI ++I TPG++ D
Sbjct: 424 SIVGGQSIEEQGFKIRQGCEVVIATPGRLLD 454
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
+ +FE P +LK + GF++P+ IQ + P +A Q+++A +++G+GKT
Sbjct: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWP--IALQCQDVVAIAKTGSGKT 201
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 526 LSRVDSN-KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD 702
+ R+ +N ++ P VL L+PT ELA Q E A K + ++ P+G ++ D
Sbjct: 212 IKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGR---SSRISSTCLYGGAPKGPQLRD 268
Query: 703 -----HILIGTPGKMFD 738
+++ TPG++ D
Sbjct: 269 LDRGVDVVVATPGRLND 285
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 34.7 bits (76), Expect = 0.084
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 541 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD--HILI 714
+ K P+VL LSPT ELA Q +V + C + + P+ S + I+I
Sbjct: 163 AKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVI 222
Query: 715 GTPGKMFD 738
GTPG+M D
Sbjct: 223 GTPGRMKD 230
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 34.7 bits (76), Expect = 0.084
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH---IL 711
++K P + L+PT EL +Q E A + K P K V G+ L + ++ ++
Sbjct: 253 TDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLP-FKTALVVGGDPLAQQIYRIENGIELI 311
Query: 712 IGTPGKMFD 738
+GTPG++ D
Sbjct: 312 VGTPGRLID 320
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLC--LSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 672
K +F L ++ + +++ P L+PT ELAIQ +A + I L+ +V
Sbjct: 33 KTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQ---IAKQFEALGSAISLQCSVLIG 89
Query: 673 ELPRGSKITD-----HILIGTPGKMFD 738
+PR S+ H+++GTPG++ D
Sbjct: 90 GIPRTSQTISLAKRPHVVVGTPGRLLD 116
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 398 MGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
MG+ AP++IQ +P L +++I Q+G+GKTA
Sbjct: 1 MGWKAPTRIQAEVIPFALQG--RDVIGVGQTGSGKTA 35
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Frame = +1
Query: 547 KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV-----RGE--ELPRGSKITDH 705
+N V+ + PT ELAIQT VA ++ K+ + L Y + RGE +L +G +
Sbjct: 166 RNGTGVVVVCPTRELAIQTHNVAKELMKYHSQ-TLGYIIGGNGRRGEADQLAKGV----N 220
Query: 706 ILIGTPGKMFD 738
+L+ TPG++ D
Sbjct: 221 LLVATPGRLLD 231
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 341 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 508
+K+F L+ + G+ P+ IQ ALP +L+ +++I +++G+GKTA
Sbjct: 218 IKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSG--RDIIGIAKTGSGKTA 271
>05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429
Length = 429
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 141 EELEISNKVAGLGLDKKHNQETDSDDVPDTPNAAD 245
EEL + N+ L ++ K + ETD D+V + P+ D
Sbjct: 356 EELSVKNETKSLAIEPKIHSETDEDEVDEWPDDDD 390
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 556 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-----HILIGT 720
P VL L+PT ELA+Q + + K + + + P+G +I D I+I T
Sbjct: 230 PIVLILAPTRELAVQIQQESGKFGSYS---RTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 286
Query: 721 PGKMFD 738
PG++ D
Sbjct: 287 PGRLID 292
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSN-KNYP--QVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKY 657
K +F L +L R+ K P +VL L+PT ELA Q + K+A+F C I
Sbjct: 244 KTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGL 303
Query: 658 AVRGEELPRGSKITDHILIGTPGKMFD 738
+ + +E+ S I++ TPG++ D
Sbjct: 304 STKVQEVALRS--MPDIVVATPGRIID 328
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +1
Query: 538 DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGSKITDHI 708
+S ++ + L L+PT ELA Q + + AKF I++ V G E+ R K I
Sbjct: 226 NSRESPLRALILTPTRELAKQVCDHLKEAAKFL-RIQVVPIVGGLSMEKQERLLKRKPEI 284
Query: 709 LIGTPGKMFD 738
++GTPG++++
Sbjct: 285 VVGTPGRLWE 294
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 565 LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSKITDHILIGTPGKM 732
+ +SPT EL+ Q VA + V G EL + + +IL+GTPGK+
Sbjct: 100 IIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKL 159
Query: 733 FD 738
FD
Sbjct: 160 FD 161
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 365 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 505
L P ++K + GF + +Q A+P LL+ +++ + +G+GKT
Sbjct: 30 LSPEVVKALKGGGFRRCTPVQAAAIPLLLSH--KDVAVDAATGSGKT 74
>02_03_0037 + 14215616-14216941
Length = 441
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 117 ASQWGQKAEELEISNKVAGLGLDKKHNQETDSDDVPDTPNAA 242
A WG + LE ++ G G+D ++ D DD T AA
Sbjct: 136 ADDWGAGKKPLERRERMGGFGVDSSMSRADDVDDWVSTKRAA 177
>01_06_0355 + 28657833-28660665,28660762-28661126
Length = 1065
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 248 FSLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQ 427
F++ ++R L ++ L I PN+ +++ + ++L N L G+ GF A +Q
Sbjct: 243 FNMSSLVRMYLGKNNLSGSI----PNNGSFNLPMLQTVNLNTNHLTGIVPQGFGACKNLQ 298
Query: 428 ETAL 439
E L
Sbjct: 299 EFIL 302
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 499 KNCSFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE----VAAKMAKFCPEIKLKYAVR 666
K +F L +L R+ + L L+PT ELA Q E + A + C +
Sbjct: 127 KTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSL 186
Query: 667 GEELPRGSKITDHILIGTPGKM 732
G+ +G H+++ TPG++
Sbjct: 187 GQ--AKGLARRPHVVVATPGRI 206
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +1
Query: 556 PQVLCLSPTYELAIQTGEV-----AAKMAKFCPEIKLKYAVRGEELPRGSKITD---HIL 711
P L + P+ ELA QT EV A M PEI+ + G ++ ++ HI+
Sbjct: 250 PFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIV 309
Query: 712 IGTPGKMFD 738
+ TPG++ D
Sbjct: 310 VATPGRLKD 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,926,425
Number of Sequences: 37544
Number of extensions: 398853
Number of successful extensions: 936
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -