Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1250
(774 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 170 1e-42
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 169 2e-42
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 167 1e-41
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 166 2e-41
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 142 4e-34
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 3e-24
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 101 6e-22
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 101 6e-22
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 3e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 5e-21
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 99 5e-21
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 85 5e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 5e-14
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 72 6e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 69 6e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 56 3e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 53 2e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 52 7e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 1e-04
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_6724| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 9.6
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 170 bits (413), Expect = 1e-42
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+GGKYVPRAIL+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 55 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 115 SVLDVVRKEAESCDCLQGFQLTH 137
Score = 115 bits (276), Expect = 5e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEA
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Score = 109 bits (261), Expect = 3e-24
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT 55
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 169 bits (412), Expect = 2e-42
Identities = 73/83 (87%), Positives = 81/83 (97%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+GGKYVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 268 TGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 327
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE E+CDCLQGFQLTH
Sbjct: 328 SVLDVVRKEAESCDCLQGFQLTH 350
Score = 115 bits (276), Expect = 5e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEA
Sbjct: 365 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 419
Score = 109 bits (261), Expect = 3e-24
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT 268
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 167 bits (405), Expect = 1e-41
Identities = 70/83 (84%), Positives = 81/83 (97%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+GGKYVPR++L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 TGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMD 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE E+CDC+QGFQLTH
Sbjct: 115 SVLDVVRKEAESCDCIQGFQLTH 137
Score = 114 bits (275), Expect = 6e-26
Identities = 51/55 (92%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEA
Sbjct: 152 ISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Score = 107 bits (257), Expect = 1e-23
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREIV LQAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT 55
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 166 bits (403), Expect = 2e-41
Identities = 71/81 (87%), Positives = 79/81 (97%)
Frame = +3
Query: 267 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 446
GKYVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 447 LDVVRKECENCDCLQGFQLTH 509
LDVVRKE E+CDC+QGFQLTH
Sbjct: 62 LDVVRKEAESCDCIQGFQLTH 82
Score = 112 bits (270), Expect = 3e-25
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
I KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNEA
Sbjct: 97 ILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 151
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 142 bits (343), Expect = 4e-34
Identities = 60/81 (74%), Positives = 70/81 (86%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+GG+YVPR+IL+DLEPGTMDAVR G G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 441 AVLDVVRKECENCDCLQGFQL 503
+ DV+RKE ENCDC+QG QL
Sbjct: 71 NIFDVLRKEAENCDCMQGVQL 91
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKV 622
+SKIREEYPDRI++ +SVVPSPKV
Sbjct: 108 LSKIREEYPDRILSAFSVVPSPKV 131
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 109 bits (261), Expect = 3e-24
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT 55
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVF 374
+GGKYVPRAIL+DLEPGTMD+VRSG +GQ+FRPDNFVF
Sbjct: 55 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 101 bits (242), Expect = 6e-22
Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ V G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+VD VLD +RK + C LQGF + H
Sbjct: 114 IVDLVLDRIRKLADQCTGLQGFLIFH 139
Score = 101 bits (241), Expect = 9e-22
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 487 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 546
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+VD VLD +RK + C LQGF + H
Sbjct: 547 IVDLVLDRIRKLADQCTGLQGFLIFH 572
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 154 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 213
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 214 RRNLDIERPTYTNLN 228
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 587 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 646
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 647 RRNLDIERPTYTNLN 661
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 467
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 101 bits (242), Expect = 6e-22
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 639 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 698
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
L+D VLD +RK + C LQGF + H
Sbjct: 699 LIDLVLDRIRKLADQCTGLQGFLIFH 724
Score = 100 bits (240), Expect = 1e-21
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 118 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 177
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+VD VLD +RK + C LQGF + H
Sbjct: 178 IVDLVLDRIRKLADQCTGLQGFLIFH 203
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 739 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 798
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 799 RRNLDIERPTYTNLN 813
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 218 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 277
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 278 RRNLDIERPTYTNLN 292
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 79 TMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
T+RE + + GQ G QIG WE+ EHGI P G
Sbjct: 585 TVRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 619
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 73 VVTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
++ RE + + GQ G QIG WE+ EHGI P G
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 98
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 546
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAV 326
+E+G GK+VPRA+ +DLEP + +
Sbjct: 566 SETGAGKHVPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 100 bits (240), Expect = 1e-21
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 53 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 112
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
++D VLD +RK + C LQGF + H
Sbjct: 113 IIDLVLDRIRKLADQCTGLQGFLIFH 138
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P+VS VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 153 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 212
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 213 RRNLDIERPTYTNLN 227
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 33
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 99 bits (238), Expect = 2e-21
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 858 SETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 917
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
++D VLD +RK + C LQGF + H
Sbjct: 918 MIDLVLDRIRKLADQCTGLQGFLIFH 943
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
AE+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 425 AETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+D VLD +RK + C LQGF + H
Sbjct: 485 QIDIVLDRLRKLADGCTGLQGFLIFH 510
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 958 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 1017
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 1018 RRNLDIERPTYTNLN 1032
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P +S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 525 MERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 584
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 585 RRNLDIERPTYTNLN 599
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 405
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE + + GQ G Q+G WE+ EHGI P G
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDG 838
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 99.5 bits (237), Expect = 3e-21
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
++D VLD +RK + C LQGF + H
Sbjct: 114 MIDTVLDRLRKLADGCTGLQGFLIFH 139
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN+VL+ H +E++D + +DNEA + I
Sbjct: 154 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDIC 213
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 214 RRNLDIERPTYTNLN 228
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDG 34
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 98.7 bits (235), Expect = 5e-21
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
+ GKYVPRA+L+DLEP +D VR+G Y L+ P+ + G+ A NN+A+GHYT G E+V+
Sbjct: 968 AAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVE 1027
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
V+D +RK + C LQGF + H
Sbjct: 1028 VVMDKIRKMTDQCSGLQGFLIFH 1050
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 569 EYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTISATGLSR 745
+Y + ++V P+P +S VVEPYN+VL+ H +E++D T+ +DNEA + + L
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDV 1130
Query: 746 YRTNVRDLN 772
R +LN
Sbjct: 1131 ERPGYANLN 1139
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 98.7 bits (235), Expect = 5e-21
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
++D VLD RK + C LQGF + H
Sbjct: 114 IIDLVLDRCRKLADQCTGLQGFLIFH 139
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 154 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 213
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 214 RRNLDIDRPTYTNLN 228
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDG 34
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D +R+G Y QLF P+ + G+ A NN+A+GHYT G +
Sbjct: 472 SETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKD 531
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+D VLD +RK + C LQGF + H
Sbjct: 532 HIDNVLDRIRKLADQCSGLQGFLVFH 557
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G +
Sbjct: 39 SETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQ 98
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
L++ VLD +RK + C LQGF + H
Sbjct: 99 LIEIVLDRLRKLADQCTGLQGFLIFH 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN+VL+ H +E++D + +DNEA + I
Sbjct: 572 LERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDIC 631
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 632 RRNLDIERPTYTNLN 646
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 139 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 198
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 199 RRNLDIERPTYTNLN 213
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
RE V + GQ G Q+G WE+ EHGI P G
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDG 452
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
AE+G GK+VPRA+ +DLEP +D +R+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 19 AETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 78
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
+D LD +RK + C LQGF + H
Sbjct: 79 HIDLALDRIRKLADQCTGLQGFLIFH 104
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + ++V P+P++S VVEPYN++LS H +E++D + +DNEA + I
Sbjct: 119 MERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDIC 178
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 179 RRNLDIERPTYTNLN 193
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 85.4 bits (202), Expect = 5e-17
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+SKIREEYPDR+++++ V+PSP VS+TV EPYNA LS HQLV+ D CIDNEA + I
Sbjct: 60 LSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNIC 119
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 120 YNVLKRETPTYSELN 134
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3
Query: 378 QSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 509
Q+ A NNWAKG YTEGAEL+D+ +D +RK ENCD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +3
Query: 318 DAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGF 497
D VR+G Y QLF P+ + G+ A NN+A+GHYT G EL+D VLD +RK + C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 498 QLTH 509
+ H
Sbjct: 73 LIFH 76
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 91 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 150
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 151 RRNLDIERPTYTNLN 165
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +3
Query: 324 VRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQL 503
VR+G Y QLF P+ + G+ A NN+A+GHYT G EL+D VLD +RK + C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 504 TH 509
H
Sbjct: 63 FH 64
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 79 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 138
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 139 RRNLDIERPTYTNLN 153
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 71.7 bits (168), Expect = 6e-13
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = +2
Query: 560 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDE 691
++EEYPDRI+++ SV PSP+VS+ VVEPYNA LS+HQL+E TDE
Sbjct: 36 LQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDE 79
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 456 VRKECENCDCLQGFQLTH 509
+RKE E+CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +3
Query: 324 VRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQL 503
+R+G Y QLF P+ + G+ A NN+A+GHYT G E +D LD +RK + C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 504 TH 509
H
Sbjct: 63 FH 64
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + ++V P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 79 MERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 138
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 139 RRNLDIERPTYTNLN 153
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 68.5 bits (160), Expect = 6e-12
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP T+ A+ P+ + G+ A NN+A+GHYT G +
Sbjct: 54 SETGAGKHVPRAVFVDLEP-TVVALS---------PEQLITGKEDAANNYARGHYTIGKQ 103
Query: 432 LVDAVLDVVRKECENCDCLQGFQLTH 509
VD VLD +RK + C LQGF + H
Sbjct: 104 QVDQVLDRLRKLADQCSGLQGFFIFH 129
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + ++V P+P ++ VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 144 MERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 203
Query: 728 ATGLSRYRTNVRDLN 772
L R + +LN
Sbjct: 204 RRNLDIERPSYTNLN 218
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 324 VRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRK 464
VR+G Y QLF P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +3
Query: 324 VRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRK 464
VR G Y LF PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 282 RAILLDLEPGTMDAVRSGAY--GQLFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDAVLD 452
RA+ +D+E + S A G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 453 VVRKECENCDCLQGF 497
+V++E E CD L GF
Sbjct: 127 LVQREVEKCDRLDGF 141
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 91 IVHLQAGQCGNQIGAKFWEIISEE 162
IV LQ GQCGNQIG + +++I E+
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y R ++V P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 285 MERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 344
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 345 RRNLDIERPTYTNLN 359
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 73 VVTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
+ TMRE + + GQ G QIG WE+ EHGI P G
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG 229
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA-FTIS 727
+ ++ +Y + +++ P+P++S VVEPYN++L+ H +E++D + +DNEA + I
Sbjct: 29 MERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 88
Query: 728 ATGLSRYRTNVRDLN 772
L R +LN
Sbjct: 89 RRNLDIERPTYTNLN 103
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
++ + ++YPD T +V PS D + PYN+VL++HQL E+ D I+N+A
Sbjct: 166 LNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQA 219
Score = 35.5 bits (78), Expect = 0.048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 282 RAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNW 401
RA+L+D+E G ++ + G +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 139 FWEIISEEHGIDPTGVYRGT-SDLQLERISVYYNE 240
FWE+I+EEHGIDP G S +Q +R++VY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 282 RAILLDLEPGTMDAVR--SGAYGQLFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 440
R + +D E + + R G +GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+D +RKE E CD G + H
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMH 121
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 560 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 712
+ ++YPD T +V PS D + PYN+VL++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 264 GGKYVPRAILLDLEPGTMDAVR 329
GGK+VPRA+ +DLEP + ++
Sbjct: 58 GGKHVPRAVFVDLEPSVVGRMK 79
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 611 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
S +SD VV+PYN++L++ +L +N D +DN A
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTA 245
>SB_14142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 571 VPRQNHEHILSSPLAQSIRHRRRTIQRSSLHPSTSREYRRNLLHRQ*GLYDICYRTLKVP 750
+ ++N +H ++++HR+R I + +L +RNLLHR+ GL I L V
Sbjct: 242 ISKRNLQHREGLISKRNLQHRQRLISKRNLQHREGMISKRNLLHRE-GLITITQSDLSVA 300
Query: 751 NQRT 762
N+ +
Sbjct: 301 NRHS 304
>SB_6724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 584 IMNTYSVVPSPKVSDTVVEPYNA-VLSIHQLVENTDETYCIDNEAFTISATGLSRYRTNV 760
I+ +Y + PK++D V + + + + N D CID+ + TIS L R NV
Sbjct: 413 IVYSYHYMLDPKIADLVSKELDKKAVVVFDEAHNIDNV-CIDSMSVTISRRTLDRSHANV 471
Query: 761 RDL 769
L
Sbjct: 472 ESL 474
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVS 625
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 504 SVGNPGGNRSSHTPCV-LHQGRRR--RAQRPP 418
S GN G N H C+ H+ RRR R Q+PP
Sbjct: 259 SEGNRGWNSKPHQTCITCHRSRRRRHRPQQPP 290
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 556 KDP*RVPRQNHEHILSSPLAQSIR 627
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 568 RVPRQNHEHILSSPLAQSIR 627
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 568 RVPRQNHEHILSSPLAQSIR 627
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 568 RVPRQNHEHILSSPLAQSIR 627
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,941,763
Number of Sequences: 59808
Number of extensions: 368110
Number of successful extensions: 1110
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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