Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1250
(774 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 117 5e-28
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 117 5e-28
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 117 5e-28
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 117 5e-28
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 26 1.1
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 26 1.5
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 26 1.5
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 2.6
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 24 6.0
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 7.9
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 117 bits (281), Expect = 5e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA LSIHQLVENTDETYCIDNEA
Sbjct: 48 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEA 102
Score = 77.4 bits (182), Expect = 5e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 411 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 509
HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
Score = 31.9 bits (69), Expect = 0.023
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 715 LYDICYRTLKVPN 753
LYDIC+RTLKVPN
Sbjct: 103 LYDICFRTLKVPN 115
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 117 bits (281), Expect = 5e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA LSIHQLVENTDETYCIDNEA
Sbjct: 48 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEA 102
Score = 77.4 bits (182), Expect = 5e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 411 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 509
HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
Score = 31.9 bits (69), Expect = 0.023
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 715 LYDICYRTLKVPN 753
LYDIC+RTLKVPN
Sbjct: 103 LYDICFRTLKVPN 115
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 117 bits (281), Expect = 5e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA LSIHQLVENTDETYCIDNEA
Sbjct: 48 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEA 102
Score = 77.4 bits (182), Expect = 5e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 411 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 509
HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
Score = 31.9 bits (69), Expect = 0.023
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 715 LYDICYRTLKVPN 753
LYDIC+RTLKVPN
Sbjct: 103 LYDICFRTLKVPN 115
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 117 bits (281), Expect = 5e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 551 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEA 715
ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNA LSIHQLVENTDETYCIDNEA
Sbjct: 48 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEA 102
Score = 77.4 bits (182), Expect = 5e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 411 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 509
HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
Score = 31.9 bits (69), Expect = 0.023
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 715 LYDICYRTLKVPN 753
LYDIC+RTLKVPN
Sbjct: 103 LYDICFRTLKVPN 115
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 580 QNHEHILSSPLAQSIRHRRRTIQRSSLHPSTSR 678
+ H+H SSP+A R RT S+ H T+R
Sbjct: 289 RQHDHQTSSPIATRNRFTTRTPATSTEHRYTTR 321
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 25.8 bits (54), Expect = 1.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 602 VVPSPKVSDTVVEPYNAVLSIHQLVENTDETY 697
V P + S +P N +HQ +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 25.8 bits (54), Expect = 1.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWE 147
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 25.0 bits (52), Expect = 2.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 612 RPKYQTPSSNHTTQFSPSIN*SRIQTKLTA*TMR 713
+P PS HT+ + S+N + +T TA T R
Sbjct: 150 KPSVSQPSRTHTSTNASSLNATNTRTTKTASTRR 183
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 23.8 bits (49), Expect = 6.0
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Frame = -3
Query: 400 QLLPAPDWPKTKLSGRKSCP*APERTASMVP-----------GSRSRRMARGTYFPPLSA 254
Q LPA WP + S R E +S VP G++ G P SA
Sbjct: 205 QRLPAQQWPTVQQSVRAQRQGVTESASSAVPDEAGTWVEVVRGNQRGNKQNGVNLPQQSA 264
Query: 253 SQQRPHYSKQ 224
+Q H Q
Sbjct: 265 QRQPAHRQHQ 274
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 7.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 372 FGQSGAGNNWAKGHYTEGAELVDAVLDVV 458
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,410
Number of Sequences: 2352
Number of extensions: 12083
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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