Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1249
(752 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 24 1.1
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 3.5
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 23 3.5
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 23 3.5
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 23 3.5
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 4.6
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 4.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 6.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 21 8.0
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 8.0
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 208 YFDCDFLLFLIFYSG*H*QRKFTILRLAAYQNSYGNI 318
Y+ C+ +FLIF+S +R FT L + A+ N N+
Sbjct: 154 YYVCNTTIFLIFHSVLPIKRFFTSLGI-AFDNIMKNL 189
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 44 GHVRTHPGRRRF 79
GH+RTH G + F
Sbjct: 25 GHIRTHTGEKPF 36
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 617 FEFVCLKNSCFCRTFLIPHKTDL 685
F F+C++ +L+P DL
Sbjct: 8 FAFICIQGLVSAEEYLVPQNIDL 30
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 376 SHFTDIVFFFYYLTKANVIQCCHKNF 299
S + I FFY+ T N+I K F
Sbjct: 238 SFYFFISTFFYFFTTGNIIATYDKQF 263
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 376 SHFTDIVFFFYYLTKANVIQCCHKNF 299
S + I FFY+ T N+I K F
Sbjct: 234 SFYFFISTFFYFFTTGNIIATYDKQF 259
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 4 GCAELILVGFVCCWS 48
G EL+L G VC WS
Sbjct: 500 GHQELVLGGEVCLWS 514
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 47 HVRTHPGRRRF 79
H+RTH G +RF
Sbjct: 365 HLRTHTGEKRF 375
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 461 FYFDLLKHGKCL*FYSKTIIW*YCKYILISFFF 559
F + + KCL F+ ++ YC+ + F F
Sbjct: 54 FIYAFVAPVKCLAFFCTALVIFYCQEGSVDFLF 86
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 461 FYFDLLKHGKCL*FYSKTIIW*YCKYILISFFF 559
F + + KCL F+ ++ YC+ + F F
Sbjct: 287 FIYAFVAPVKCLAFFCTALVIFYCQEGSVDFLF 319
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 461 FYFDLLKHGKCL*FYSKTIIW*YCKYILISFFF 559
F + + KCL F+ ++ YC+ + F F
Sbjct: 287 FIYAFVAPVKCLAFFCTALVIFYCQEGSVDFLF 319
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 38 VVGHVRTHPGRRRFM*RC 91
+ HVRTH G + F RC
Sbjct: 37 LTAHVRTHSGEKPF--RC 52
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 38 VVGHVRTHPGRRRFM*RC 91
+ HVRTH G + F RC
Sbjct: 293 LTAHVRTHSGEKPF--RC 308
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,150
Number of Sequences: 336
Number of extensions: 3752
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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