Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1248
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 44 3e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 39 0.007
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 39 0.007
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 37 0.028
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 37 0.028
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 37 0.028
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 37 0.037
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.037
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 37 0.037
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.037
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.037
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 36 0.085
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 35 0.11
BT001645-1|AAN71400.1| 998|Drosophila melanogaster RE41560p pro... 30 3.2
AY089478-1|AAL90216.1| 281|Drosophila melanogaster AT29119p pro... 30 3.2
AY058703-1|AAL13932.1| 1714|Drosophila melanogaster LD42739p pro... 30 3.2
AE014297-3421|AAN13964.1| 996|Drosophila melanogaster CG5394-PB... 30 3.2
AE014297-3420|AAF56211.1| 1714|Drosophila melanogaster CG5394-PA... 30 3.2
AE014134-2840|AAN10988.1| 281|Drosophila melanogaster CG31803-P... 30 3.2
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 30 4.2
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro... 30 4.2
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA... 30 4.2
U59923-1|AAC47469.1| 1714|Drosophila melanogaster glutamyl-proly... 29 7.4
M74104-1|AAA28594.1| 1714|Drosophila melanogaster transfer RNA-G... 29 7.4
BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p pro... 29 9.8
AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA... 29 9.8
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 43.6 bits (98), Expect = 3e-04
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = -2
Query: 517 IALLSGVWWGAHPFSLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 338
I LS + + + +L + A I + L+YG F+ L+K+ + A+R+ GA
Sbjct: 768 IKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
Query: 337 MRSSPINALQVECSEAPLHLRR 272
RS+PIN L E + PL ++R
Sbjct: 828 YRSTPINNLLYESNTPPLEMKR 849
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -3
Query: 735 WLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHC 556
W + SLS+ K + R R + + NN ++P + LG+ L+++ + H
Sbjct: 696 WCSYSGASLSLSKCQHLHICRKR-HCTCKISCNNFQIPSVTSLKILGITLNNKYKWNTHI 754
Query: 555 YYISDKCEKILNILRC--SLEF 496
+ K LNI++C SL+F
Sbjct: 755 NLLLPKLHNKLNIIKCLSSLKF 776
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -3
Query: 735 WLDNNSLSLSVPKSIIVLFS--RMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSP 562
WL + +S++V K V F+ + PP V NNI +P E T+LGV LD RLT
Sbjct: 695 WLADWRISINVQKCKQVTFTLNKQTCPPLV---LNNICIPQADEVTYLGVHLDRRLTWRK 751
Query: 561 H 559
H
Sbjct: 752 H 752
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 481 PFSLK---LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 338
P SL+ LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -3
Query: 735 WLDNNSLSLSVPKSIIVLFS--RMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSP 562
WL + +S++V K V F+ + PP V NNI +P E T+LGV LD RLT
Sbjct: 695 WLADWRISINVQKCKQVTFTLNKQTCPPLV---LNNICIPQADEVTYLGVHLDRRLTWRK 751
Query: 561 H 559
H
Sbjct: 752 H 752
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 481 PFSLK---LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 338
P SL+ LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.1 bits (82), Expect = 0.028
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVFYNNIRV-PVKSEATFLGVILDS 580
LK W D +S++ K+ V+F+ + LP S+ +V ++S+ ++LGVILDS
Sbjct: 747 LKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDS 806
Query: 579 RLTGSPH 559
+LT S H
Sbjct: 807 KLTLSSH 813
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 37.1 bits (82), Expect = 0.028
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPP-SVSVFYNNIRVPVKSEATFLGVILDSR 577
L L W L ++ K+I F+ L P + + + + S+A +LG+ LD R
Sbjct: 702 LTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKR 761
Query: 576 LTGSPHCYYISDKCEKILNILRCSLEFGGEPTL 478
LT PH + +C + + LR L TL
Sbjct: 762 LTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTL 794
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 37.1 bits (82), Expect = 0.028
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 735 WLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 559
W ++ ++ KS V F+ + R PP V + + VP + A +LGV+LD RLT S H
Sbjct: 704 WARRWNIGINSSKSNNVCFTLKRRTPPPV--YIEEVPVPQPNAAKYLGVLLDRRLTFSKH 761
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.7 bits (81), Expect = 0.037
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVF-YNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+++ + +P ++ + +S+ ++LGVILDS
Sbjct: 631 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDS 690
Query: 579 RLTGSPH 559
+LT SPH
Sbjct: 691 KLTLSPH 697
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.037
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVF-YNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+++ + +P ++ + +S+ ++LGVILDS
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDS 806
Query: 579 RLTGSPH 559
+LT SPH
Sbjct: 807 KLTLSPH 813
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.037
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVF-YNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+++ + +P ++ + +S+ ++LGVILDS
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDS 806
Query: 579 RLTGSPH 559
+LT SPH
Sbjct: 807 KLTLSPH 813
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.037
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVF-YNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+++ + +P ++ + +S+ ++LGVILDS
Sbjct: 709 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDS 768
Query: 579 RLTGSPH 559
+LT SPH
Sbjct: 769 KLTLSPH 775
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.037
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPPSVSVF-YNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+++ + +P ++ + +S+ ++LGVILDS
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDS 806
Query: 579 RLTGSPH 559
+LT SPH
Sbjct: 807 KLTLSPH 813
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 35.5 bits (78), Expect = 0.085
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 753 LKLLKVWLDNNSLSLSVPKSIIVLFS-RMRLPP-SVSVFYNNIRVPVKSEATFLGVILDS 580
LK W D +S++ K+ V+F+ + LP S++V + +S+ ++LGV LDS
Sbjct: 759 LKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDS 818
Query: 579 RLTGSPH 559
+LT S H
Sbjct: 819 KLTLSSH 825
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 35.1 bits (77), Expect = 0.11
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 744 LKVWLDNNSLSLSVPKSIIVLFS--RMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLT 571
+K WL + + ++ K V F+ R PP + N+I +P E T+LGV LD RLT
Sbjct: 694 IKKWLSDWRIKVNEQKCKHVTFTLNRQDCPP---LLLNSIPLPKADEVTYLGVHLDRRLT 750
Query: 570 GSPH 559
H
Sbjct: 751 WRRH 754
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 466 LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 338
LLYN++++ I YG+ + + + + QSK LR I GA
Sbjct: 786 LLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
>BT001645-1|AAN71400.1| 998|Drosophila melanogaster RE41560p
protein.
Length = 998
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT S+A
Sbjct: 56 IDVAVKKLLALKADYKSATGKDWKPGQTSASSA 88
>AY089478-1|AAL90216.1| 281|Drosophila melanogaster AT29119p
protein.
Length = 281
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 687 VLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYIS 544
+++ M+L P + N + ++++ F G+ L R+T + + YYI+
Sbjct: 13 LMYCGMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIA 60
>AY058703-1|AAL13932.1| 1714|Drosophila melanogaster LD42739p
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT S+A
Sbjct: 772 IDVAVKKLLALKADYKSATGKDWKPGQTSASSA 804
>AE014297-3421|AAN13964.1| 996|Drosophila melanogaster CG5394-PB,
isoform B protein.
Length = 996
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT S+A
Sbjct: 54 IDVAVKKLLALKADYKSATGKDWKPGQTSASSA 86
>AE014297-3420|AAF56211.1| 1714|Drosophila melanogaster CG5394-PA,
isoform A protein.
Length = 1714
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT S+A
Sbjct: 772 IDVAVKKLLALKADYKSATGKDWKPGQTSASSA 804
>AE014134-2840|AAN10988.1| 281|Drosophila melanogaster CG31803-PA
protein.
Length = 281
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -3
Query: 687 VLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYIS 544
+++ M+L P + N + ++++ F G+ L R+T + + YYI+
Sbjct: 13 LMYCGMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIA 60
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -3
Query: 627 VPVKSEATFLGVILDSRLTGSPH 559
+ ++S+ ++LGVILDS+LT S H
Sbjct: 6 IKIESKQSYLGVILDSKLTLSSH 28
>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
Length = 1486
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 278 QTTISL*PFLFRAFQVYNHPLYTKLRSLLECMDYPYWAHKSPPCLIVSLQ 129
Q S+ +L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1219 QDVTSIRLYLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
protein.
Length = 1486
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 278 QTTISL*PFLFRAFQVYNHPLYTKLRSLLECMDYPYWAHKSPPCLIVSLQ 129
Q S+ +L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1219 QDVTSIRLYLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>U59923-1|AAC47469.1| 1714|Drosophila melanogaster
glutamyl-prolyl-tRNA synthetase protein.
Length = 1714
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT ++A
Sbjct: 772 IDVAVKKLLALKADYKSATGKDWKPGQTSATSA 804
>M74104-1|AAA28594.1| 1714|Drosophila melanogaster transfer
RNA-Glu-Pro aminoacylsynthetase protein.
Length = 1714
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 417 INVP*SKILLIRALYKSFREKGWAPHQTPESNA 515
I+V K+L ++A YKS K W P QT ++A
Sbjct: 772 IDVAVKKLLALKADYKSATGKDWKPGQTSATSA 804
>BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p
protein.
Length = 1211
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -2
Query: 415 LEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQVECS 296
+EPC ++ H+LD+++S+A +I + P + ++EC+
Sbjct: 8 IEPCRSIGPHELDVVKSQA--VIKLSPVPVPAHFKRLECN 45
>AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA
protein.
Length = 1211
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -2
Query: 415 LEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQVECS 296
+EPC ++ H+LD+++S+A +I + P + ++EC+
Sbjct: 8 IEPCRSIGPHELDVVKSQA--VIKLSPVPVPAHFKRLECN 45
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,029,815
Number of Sequences: 53049
Number of extensions: 717369
Number of successful extensions: 1550
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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