Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1247
         (809 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94552-1|CAA64245.1|  915|Homo sapiens glutamate receptor protein.     30   8.6  
X80878-1|CAA56846.1| 1324|Homo sapiens R kappa B protein.              30   8.6  
U92458-1|AAB51763.1|  915|Homo sapiens metabotropic glutamate re...    30   8.6  
BC063280-1|AAH63280.1| 1299|Homo sapiens NFRKB protein protein.        30   8.6  
AF458054-1|AAM47559.1|  906|Homo sapiens metabotropic glutamate ...    30   8.6  
AF458053-1|AAM47558.1|  911|Homo sapiens metabotropic glutamate ...    30   8.6  
AF458052-1|AAM47557.1|  924|Homo sapiens metabotropic glutamate ...    30   8.6  
AB209214-1|BAD92451.1|  656|Homo sapiens Metabotropic glutamate ...    30   8.6  

>X94552-1|CAA64245.1|  915|Homo sapiens glutamate receptor protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 740 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 790


>X80878-1|CAA56846.1| 1324|Homo sapiens R kappa B protein.
          Length = 1324

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 565 LDRKNSLLSQPIRMGPCSQIRSTRTHAFCILRRTILCTPNAL 690
           +D  + +L+ P+ +GPC     TR    C+L  T +  P  L
Sbjct: 14  MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDL 55


>U92458-1|AAB51763.1|  915|Homo sapiens metabotropic glutamate
           receptor 7 protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 740 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 790


>BC063280-1|AAH63280.1| 1299|Homo sapiens NFRKB protein protein.
          Length = 1299

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 565 LDRKNSLLSQPIRMGPCSQIRSTRTHAFCILRRTILCTPNAL 690
           +D  + +L+ P+ +GPC     TR    C+L  T +  P  L
Sbjct: 1   MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDL 42


>AF458054-1|AAM47559.1|  906|Homo sapiens metabotropic glutamate
           receptor 7 variant 5 protein.
          Length = 906

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 740 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 790


>AF458053-1|AAM47558.1|  911|Homo sapiens metabotropic glutamate
           receptor 7 variant 4 protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 740 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 790


>AF458052-1|AAM47557.1|  924|Homo sapiens metabotropic glutamate
           receptor 7 variant 3 protein.
          Length = 924

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 740 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 790


>AB209214-1|BAD92451.1|  656|Homo sapiens Metabotropic glutamate
           receptor 7 variant protein.
          Length = 656

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 94  PRVINGGGRCDSQLSDLLMSLCYAAFLIAVVCGVALRSRGIRNNYREATHI 246
           P    G  +CD     ++ SL Y+  L+      A+++RG+  N+ EA  I
Sbjct: 495 PEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPI 545


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,593,566
Number of Sequences: 237096
Number of extensions: 2708947
Number of successful extensions: 7777
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7772
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)