Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1246
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p pro...   104   1e-22
AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA ...   104   1e-22
BT012471-1|AAS93742.1| 1201|Drosophila melanogaster RE24802p pro...    30   3.4  
BT011364-1|AAR96156.1| 1201|Drosophila melanogaster RE66627p pro...    30   3.4  
AE014296-1738|AAS65045.1| 1201|Drosophila melanogaster CG8177-PI...    30   3.4  
AE014296-1737|AAS65044.1| 1201|Drosophila melanogaster CG8177-PH...    30   3.4  
AE014296-1736|AAN11928.1| 1201|Drosophila melanogaster CG8177-PF...    30   3.4  
AE014296-1735|AAN11927.1| 1201|Drosophila melanogaster CG8177-PC...    30   3.4  
AE014296-1734|AAN11926.1| 1201|Drosophila melanogaster CG8177-PB...    30   3.4  
AE014296-1733|AAN11925.1| 1268|Drosophila melanogaster CG8177-PG...    30   3.4  
AE014296-1732|AAF50207.2| 1268|Drosophila melanogaster CG8177-PA...    30   3.4  
BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p pro...    29   5.9  
AE014296-1742|AAN11930.1| 1161|Drosophila melanogaster CG8177-PD...    29   5.9  
AE014296-1741|AAN11929.1| 1228|Drosophila melanogaster CG8177-PE...    29   5.9  

>BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p
           protein.
          Length = 374

 Score =  104 bits (249), Expect = 1e-22
 Identities = 45/94 (47%), Positives = 66/94 (70%)
 Frame = +2

Query: 227 PK*RGLFLQKTQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIV 406
           PK    F    ++ T F N+IYG+F+  P   +  VK+T+IYPAT+KHI K+S  + +++
Sbjct: 72  PKKPSYFTADLKVDTEFINNIYGSFQVVPTQDLCSVKSTVIYPATEKHIEKYSVSQKYLI 131

Query: 407 LETPELYKKLTLPHLEKEQFNLQWVYNILEGKSE 508
            ETP+LY+++TLP+L   QF+L+WVYNILE K E
Sbjct: 132 RETPDLYQRITLPYLTSSQFSLEWVYNILEHKQE 165



 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +1

Query: 511 DRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDLKSL 642
           +RIV++++  K GF+LLPDLKWDG   ETLYLL IV +RD+KSL
Sbjct: 167 ERIVYEDRDPKTGFILLPDLKWDGRNVETLYLLGIVHKRDIKSL 210



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/45 (42%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +3

Query: 102 FVLEKILNNNTNRKTACVVGKFKDK-SGVALILFEKNAFKENDLS 233
           F L++IL NN+ RK+  ++G F D  +  A+++FEKNA++E+D++
Sbjct: 20  FQLKRILTNNSVRKSISLLGTFPDLGTDDAIVVFEKNAYRESDVA 64


>AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA
           protein.
          Length = 374

 Score =  104 bits (249), Expect = 1e-22
 Identities = 45/94 (47%), Positives = 66/94 (70%)
 Frame = +2

Query: 227 PK*RGLFLQKTQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIV 406
           PK    F    ++ T F N+IYG+F+  P   +  VK+T+IYPAT+KHI K+S  + +++
Sbjct: 72  PKKPSYFTADLKVDTEFINNIYGSFQVVPTQDLCSVKSTVIYPATEKHIEKYSVSQKYLI 131

Query: 407 LETPELYKKLTLPHLEKEQFNLQWVYNILEGKSE 508
            ETP+LY+++TLP+L   QF+L+WVYNILE K E
Sbjct: 132 RETPDLYQRITLPYLTSSQFSLEWVYNILEHKQE 165



 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +1

Query: 511 DRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDLKSL 642
           +RIV++++  K GF+LLPDLKWDG   ETLYLL IV +RD+KSL
Sbjct: 167 ERIVYEDRDPKTGFILLPDLKWDGRNVETLYLLGIVHKRDIKSL 210



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/45 (42%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +3

Query: 102 FVLEKILNNNTNRKTACVVGKFKDK-SGVALILFEKNAFKENDLS 233
           F L++IL NN+ RK+  ++G F D  +  A+++FEKNA++E+D++
Sbjct: 20  FQLKRILTNNSVRKSISLLGTFPDLGTDDAIVVFEKNAYRESDVA 64


>BT012471-1|AAS93742.1| 1201|Drosophila melanogaster RE24802p
           protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>BT011364-1|AAR96156.1| 1201|Drosophila melanogaster RE66627p
           protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1738|AAS65045.1| 1201|Drosophila melanogaster CG8177-PI,
           isoform I protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1737|AAS65044.1| 1201|Drosophila melanogaster CG8177-PH,
           isoform H protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1736|AAN11928.1| 1201|Drosophila melanogaster CG8177-PF,
           isoform F protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1735|AAN11927.1| 1201|Drosophila melanogaster CG8177-PC,
           isoform C protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1734|AAN11926.1| 1201|Drosophila melanogaster CG8177-PB,
           isoform B protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1733|AAN11925.1| 1268|Drosophila melanogaster CG8177-PG,
           isoform G protein.
          Length = 1268

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>AE014296-1732|AAF50207.2| 1268|Drosophila melanogaster CG8177-PA,
           isoform A protein.
          Length = 1268

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 99  DFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           D  ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 38  DSEMDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 84


>BT003194-1|AAO24949.1|  371|Drosophila melanogaster RE59468p
           protein.
          Length = 371

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 108 LEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 1   MDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 44


>AE014296-1742|AAN11930.1| 1161|Drosophila melanogaster CG8177-PD,
           isoform D protein.
          Length = 1161

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 108 LEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 1   MDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 44


>AE014296-1741|AAN11929.1| 1228|Drosophila melanogaster CG8177-PE,
           isoform E protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 108 LEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEE 239
           ++K+   N+ RK    V  F+D S + +   +KN+ + NDL+ E
Sbjct: 1   MDKVFAGNSARKDKFDVNTFQDNSQLPIGSRKKNSIRTNDLNIE 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,980,697
Number of Sequences: 53049
Number of extensions: 599721
Number of successful extensions: 1582
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)