Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1243
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.0  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   4.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   7.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 589 SHDKLVEEIFQHEDKDKNGFISHEE 663
           S + LV  +F H D++ NG +  EE
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREE 257


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 FQKDAPRSPSTAICSPCTTL 202
           F+K   ++P   +C PCT++
Sbjct: 102 FRKVITKAPLECMCRPCTSV 121


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 263 PNWRWASDQ 289
           PNW WA +Q
Sbjct: 109 PNWSWAKNQ 117


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 106 PEVTELKTEVVSVPEGCTT 162
           PEVT L +++V   E C+T
Sbjct: 488 PEVTMLFSDIVGFTEICST 506


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 383 NVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 496
           N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 123 NIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 160


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 383 NVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 496
           N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 138 NIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,524
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)