Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1241
(1005 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 26 0.40
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 26 0.53
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.92
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 25 1.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 6.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 6.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 6.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 6.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 6.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 6.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 6.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.5
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 6.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 6.5
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 26.2 bits (55), Expect = 0.40
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 569 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSP 664
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 25.8 bits (54), Expect = 0.53
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 458 LLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 595
+++ PL P + T +K +T+P +KP P PP
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAPP 200
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 25.0 bits (52), Expect = 0.92
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 371 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 466
+VT+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +2
Query: 440 PEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT 619
P + P + +P N + + +S P S T + P ++CW +
Sbjct: 269 PMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTINCW---S 325
Query: 620 VSPTPCPSTRDTHSPTPS 673
++ +P P + + PTPS
Sbjct: 326 LTSSPPPPYQISAQPTPS 343
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 659 SPTPSCVWTLXGRDL 703
+PTP W L GR L
Sbjct: 440 NPTPEITWELYGRRL 454
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 74 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 340 PDPQIPHRTRNRH 378
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 506 TRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
T ST PP ++PS + + + P+S T P ++++ SP S
Sbjct: 118 TNGAPPRST-PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,027
Number of Sequences: 336
Number of extensions: 4632
Number of successful extensions: 28
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28650941
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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