BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1241 (1005 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 181 2e-46 SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 91 2e-19 SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 87 5e-18 SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 74 3e-14 SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 50 7e-07 SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 45 2e-05 SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 45 2e-05 SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 34 0.027 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.15 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.26 SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 0.45 SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 29 0.78 SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 28 1.8 SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.8 SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 28 2.4 SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 2.4 SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 4.2 SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.2 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.3 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 9.6 SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 9.6 >SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2|||Manual Length = 375 Score = 181 bits (440), Expect = 2e-46 Identities = 79/86 (91%), Positives = 82/86 (95%) Frame = +2 Query: 254 GRPRHQGVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 433 GRPRH G+MVGMG KDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR Sbjct: 36 GRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 95 Query: 434 VAPEEHPVLLTEAPLNPKANREKMTR 511 VAPEEHP LLTEAPLNPK+NREKMT+ Sbjct: 96 VAPEEHPCLLTEAPLNPKSNREKMTQ 121 Score = 121 bits (292), Expect = 1e-28 Identities = 58/82 (70%), Positives = 64/82 (78%) Frame = +1 Query: 439 PRGTPCPAH*GSPQPQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 618 P PC P+ + + QI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157 Query: 619 GVSHTVPIYEGYALPHAILRLD 684 GV+HTVPIYEGYALPHAI+RLD Sbjct: 158 GVTHTVPIYEGYALPHAIMRLD 179 Score = 70.1 bits (164), Expect = 5e-13 Identities = 31/37 (83%), Positives = 34/37 (91%) Frame = +3 Query: 153 DEEVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVEGP 263 +EE+AALV+DNGSGMCKAGFAG DAPRAVFPSIV P Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38 >SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 379 Score = 91.5 bits (217), Expect = 2e-19 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%) Frame = +2 Query: 254 GRPRHQGVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-EL 430 GR +H+ VM KD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L Sbjct: 40 GRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQL 99 Query: 431 RVAPEEHPVLLTEAPLNPKANREKM 505 PEEHP+LLTE PL N+EK+ Sbjct: 100 NTLPEEHPLLLTEPPLANIRNKEKI 124 Score = 75.8 bits (178), Expect = 9e-15 Identities = 31/55 (56%), Positives = 45/55 (81%) Frame = +1 Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 672 + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI Sbjct: 126 EYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAI 180 Score = 41.5 bits (93), Expect = 2e-04 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +3 Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254 + +DNGSG KAGFAG D P+ +FP+ V Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCV 39 >SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 86.6 bits (205), Expect = 5e-18 Identities = 34/70 (48%), Positives = 54/70 (77%) Frame = +2 Query: 296 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 475 KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109 Query: 476 LNPKANREKM 505 +NP ANREKM Sbjct: 110 MNPVANREKM 119 Score = 76.6 bits (180), Expect = 5e-15 Identities = 35/68 (51%), Positives = 47/68 (69%) Frame = +1 Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660 P + + + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L Sbjct: 112 PVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171 Query: 661 PHAILRLD 684 H + RLD Sbjct: 172 NHLVGRLD 179 Score = 43.2 bits (97), Expect = 6e-05 Identities = 20/39 (51%), Positives = 26/39 (66%) Frame = +3 Query: 159 EVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVEGPAIRA 275 E A +V+DNG+G K G+A + PR FPSIV P +RA Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRA 40 >SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces pombe|chr 1|||Manual Length = 427 Score = 74.1 bits (174), Expect = 3e-14 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Frame = +2 Query: 299 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 475 D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132 Query: 476 LNPKANRE 499 LNP NRE Sbjct: 133 LNPPENRE 140 Score = 61.7 bits (143), Expect = 2e-10 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 8/72 (11%) Frame = +1 Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTV 636 P + +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H + Sbjct: 135 PPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHII 194 Query: 637 PIYEGYALPHAI 672 P+ EGY + +I Sbjct: 195 PVAEGYVIGSSI 206 Score = 39.9 bits (89), Expect = 6e-04 Identities = 14/28 (50%), Positives = 22/28 (78%) Frame = +3 Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254 +++DNG+G K G+AG DAP VFP+++ Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35 >SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 433 Score = 49.6 bits (113), Expect = 7e-07 Identities = 27/73 (36%), Positives = 37/73 (50%) Frame = +2 Query: 341 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCS 520 + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K T Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVK-TLETM 121 Query: 521 KHSTRPPCTSPSK 559 S R P T +K Sbjct: 122 FESLRCPATYLAK 134 Score = 40.7 bits (91), Expect = 3e-04 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = +1 Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660 + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L Sbjct: 119 ETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169 Score = 37.5 bits (83), Expect = 0.003 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +3 Query: 156 EEVAALVVDNGSGMCKAGFAGXDAPRAVFPS 248 +EV+A+V+D GS + GF+G D P+ V PS Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPS 39 >SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 430 Score = 44.8 bits (101), Expect = 2e-05 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = +2 Query: 260 PRHQGVMVGMGXKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 433 P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+ Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96 Query: 434 VAPEEHPVLLTEAPLNPKANREKM 505 V P E+ +++TE NP++ R+++ Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQI 120 Score = 41.1 bits (92), Expect = 2e-04 Identities = 17/66 (25%), Positives = 35/66 (53%) Frame = +1 Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660 PQ +++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + Sbjct: 113 PQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLII 172 Query: 661 PHAILR 678 I + Sbjct: 173 RKGIFK 178 Score = 33.9 bits (74), Expect = 0.036 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +3 Query: 156 EEVAALVVDNGSGMCKAGFAGXDAPRAVFPS 248 EE+ +LV+D GS + G+AG ++P + PS Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS 38 >SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 721 Score = 44.8 bits (101), Expect = 2e-05 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = +2 Query: 308 VGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 484 VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +TE NP Sbjct: 69 VGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANP 127 Query: 485 KANREKMT 508 R MT Sbjct: 128 TYVRSTMT 135 Score = 39.9 bits (89), Expect = 6e-04 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Frame = +1 Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 651 +++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G Sbjct: 136 ELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185 Score = 31.9 bits (69), Expect = 0.15 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +3 Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254 LV+DNGS +AG+ G P+ VF ++V Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLV 54 >SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosaccharomyces pombe|chr 1|||Manual Length = 523 Score = 34.3 bits (75), Expect = 0.027 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +1 Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 651 Q FE P +A + ++ LYA G G+V+D G + PI +G Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214 Score = 25.8 bits (54), Expect = 9.6 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = +2 Query: 356 PIEHGIVTNWDDMEKIWHHTF 418 PI+ G V +W+ ++ W H + Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 31.9 bits (69), Expect = 0.15 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +2 Query: 539 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673 P T+P P T PV P S P+ P P PS+ P PS Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080 Score = 27.1 bits (57), Expect = 4.2 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +2 Query: 536 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673 PP +P P P VPP P+T P P PS P P+ Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233 Score = 26.6 bits (56), Expect = 5.5 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Frame = +2 Query: 536 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673 PP PS +P VPPV P+ P P PS P PS Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137 Score = 25.8 bits (54), Expect = 9.6 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +2 Query: 536 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 673 PP +PS +P VPPV P+ P P PS P PS Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 31.1 bits (67), Expect = 0.26 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 673 SC+ ++ PP T S S P VPP S T + PT ST SP P+ Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224 Score = 29.9 bits (64), Expect = 0.59 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 673 SC+ ++ PP T S S P VPP S T + PT ST +P P+ Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167 Score = 28.7 bits (61), Expect = 1.4 Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 2/91 (2%) Frame = +2 Query: 464 TEAPLNPKANREKMTRSCSKHSTRPPCTSPSK--PCSRCTRPVVPPVSCWTPATVSPTPC 637 T P+ P + T S +T CT+ + P T PV P TV PT Sbjct: 259 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTP--------TVPPT-- 308 Query: 638 PSTRDTHSPTPSCVWTLXGRDLHRLPHEDSS 730 ST T +P P + G LP +S Sbjct: 309 -STSSTSTPPPPASTSSTGTSSSPLPSTSTS 338 Score = 28.3 bits (60), Expect = 1.8 Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 8/78 (10%) Frame = +2 Query: 464 TEAPLNPKANREKMTRSCSKHSTRPPCTSP-------SKPCSRCTRPVVPPVS-CWTPAT 619 T P+ P + T S +T CT+ S S P VPP S T Sbjct: 203 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIP 262 Query: 620 VSPTPCPSTRDTHSPTPS 673 + PT ST SP P+ Sbjct: 263 IPPTSTSSTDTNSSPLPT 280 Score = 27.5 bits (58), Expect = 3.2 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +2 Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTP 670 SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439 >SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosaccharomyces pombe|chr 2|||Manual Length = 663 Score = 30.3 bits (65), Expect = 0.45 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = +2 Query: 419 YNELRVAPEEHPVLLTEAPLNPK-ANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 595 Y+EL +A +E P L P PK A++ K + K + S KP S+ TRP +P Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77 Query: 596 VSCWTPATVSPTPCP 640 + T +V P P P Sbjct: 78 YTRLT-YSVPPLPIP 91 >SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 29.5 bits (63), Expect = 0.78 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 293 VPYRPSRPDGGAFHDRGEHGARSIXSCETGLAHT 192 VPY PS+P+GGA+ G H R + + L T Sbjct: 88 VPY-PSKPNGGAYQGIGFHYGRFVMNLRKALTST 120 >SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1666 Score = 28.3 bits (60), Expect = 1.8 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +2 Query: 416 FYNELRVAPEEHPVLLTE--APLNPKANREKMTRSCSKHSTRP 538 +Y L E+HP+LLT+ A L P+ + ++ R K P Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441 >SPCC18.03 |||shuttle craft like transcriptional regulator|Schizosaccharomyces pombe|chr 3|||Manual Length = 1077 Score = 28.3 bits (60), Expect = 1.8 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = +2 Query: 560 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 664 PC+ + PPV+C TP P C + H P Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655 >SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 593 Score = 27.9 bits (59), Expect = 2.4 Identities = 28/111 (25%), Positives = 39/111 (35%) Frame = +2 Query: 470 APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 649 +P++P ANR R S PP + KP + R V S +P + P T Sbjct: 146 SPISPSANRNDSKRQASSFRRSPPSSVHMKPSAFNGRKVSRRPSS-SPPPIPSIP-HETT 203 Query: 650 DTHSPTPSCVWTLXGRDLHRLPHEDSSTERGXXVQLPXPNREIRAFTXRRS 802 + + S V + + H H ER P R T R S Sbjct: 204 SSDTQKKSSVSSGFPENKHGKFHFHIPNERRSRFDQPPSKRMALTSTARES 254 >SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 690 Score = 27.9 bits (59), Expect = 2.4 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%) Frame = +2 Query: 410 HTFYNELRVAPEEHPVLL---TEAPLNPK----ANREKMTRSCSKHSTRPPCTSPSKPCS 568 H +N +P +P L T P NP A + S+H + +PS + Sbjct: 201 HPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN 260 Query: 569 RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 664 P+ P ++ W P T PT P + + + P Sbjct: 261 HTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291 >SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual Length = 398 Score = 27.1 bits (57), Expect = 4.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 560 PCSRCTRPVVPPVSCWTPATVSPTPCPST 646 P SR T+P+ S +P VSP PST Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290 >SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 27.1 bits (57), Expect = 4.2 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +2 Query: 536 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 643 PP P + T PV PV+ A P P P+ Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 26.2 bits (55), Expect = 7.3 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = +2 Query: 395 EKIWHHTFYNELRVAPEEHPVLLTE-APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSR 571 E+I T E P H + T AP+ PK ++ + S T P TS + P + Sbjct: 784 EEIQRLTMLLEPHAVPPIHQIKQTGYAPVQPKTSQ-----ASSILPTVPRTTSYTSPYAT 838 Query: 572 CTRPVVPPVSCWTPATVSPTPCPSTRDT 655 + + TPA V P P PST T Sbjct: 839 TSSHI-------TPADVHPLPPPSTSTT 859 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 25.8 bits (54), Expect = 9.6 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Frame = +2 Query: 470 APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPV---VPPVSCWTPATVSPTPCP 640 AP+ PKA + PP P + PV +P V+ P++V+P P Sbjct: 1456 APVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP 1515 Query: 641 ST 646 S+ Sbjct: 1516 SS 1517 >SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1016 Score = 25.8 bits (54), Expect = 9.6 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 542 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 685 C +PS+ C + PV + T S TP P+T + +PTP+ T Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,714,032 Number of Sequences: 5004 Number of extensions: 74728 Number of successful extensions: 276 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 266 length of database: 2,362,478 effective HSP length: 73 effective length of database: 1,997,186 effective search space used: 521265546 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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