Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1241
(1005 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 181 2e-46
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 91 2e-19
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 87 5e-18
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 74 3e-14
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 50 7e-07
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 45 2e-05
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 45 2e-05
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 34 0.027
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.26
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 0.45
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 29 0.78
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 28 1.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.8
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 28 2.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 2.4
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 4.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 9.6
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 9.6
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 181 bits (440), Expect = 2e-46
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +2
Query: 254 GRPRHQGVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 433
GRPRH G+MVGMG KDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 95
Query: 434 VAPEEHPVLLTEAPLNPKANREKMTR 511
VAPEEHP LLTEAPLNPK+NREKMT+
Sbjct: 96 VAPEEHPCLLTEAPLNPKSNREKMTQ 121
Score = 121 bits (292), Expect = 1e-28
Identities = 58/82 (70%), Positives = 64/82 (78%)
Frame = +1
Query: 439 PRGTPCPAH*GSPQPQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 618
P PC P+ + + QI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 619 GVSHTVPIYEGYALPHAILRLD 684
GV+HTVPIYEGYALPHAI+RLD
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLD 179
Score = 70.1 bits (164), Expect = 5e-13
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 153 DEEVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVEGP 263
+EE+AALV+DNGSGMCKAGFAG DAPRAVFPSIV P
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 91.5 bits (217), Expect = 2e-19
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 GRPRHQGVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-EL 430
GR +H+ VM KD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L
Sbjct: 40 GRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQL 99
Query: 431 RVAPEEHPVLLTEAPLNPKANREKM 505
PEEHP+LLTE PL N+EK+
Sbjct: 100 NTLPEEHPLLLTEPPLANIRNKEKI 124
Score = 75.8 bits (178), Expect = 9e-15
Identities = 31/55 (56%), Positives = 45/55 (81%)
Frame = +1
Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 672
+ +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI
Sbjct: 126 EYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAI 180
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254
+ +DNGSG KAGFAG D P+ +FP+ V
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCV 39
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 86.6 bits (205), Expect = 5e-18
Identities = 34/70 (48%), Positives = 54/70 (77%)
Frame = +2
Query: 296 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 475
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 476 LNPKANREKM 505
+NP ANREKM
Sbjct: 110 MNPVANREKM 119
Score = 76.6 bits (180), Expect = 5e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +1
Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660
P + + + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L
Sbjct: 112 PVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
Query: 661 PHAILRLD 684
H + RLD
Sbjct: 172 NHLVGRLD 179
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 159 EVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVEGPAIRA 275
E A +V+DNG+G K G+A + PR FPSIV P +RA
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRA 40
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 74.1 bits (174), Expect = 3e-14
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 299 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 475
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 476 LNPKANRE 499
LNP NRE
Sbjct: 133 LNPPENRE 140
Score = 61.7 bits (143), Expect = 2e-10
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Frame = +1
Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTV 636
P + +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +
Sbjct: 135 PPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHII 194
Query: 637 PIYEGYALPHAI 672
P+ EGY + +I
Sbjct: 195 PVAEGYVIGSSI 206
Score = 39.9 bits (89), Expect = 6e-04
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254
+++DNG+G K G+AG DAP VFP+++
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 49.6 bits (113), Expect = 7e-07
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +2
Query: 341 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCS 520
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K T
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVK-TLETM 121
Query: 521 KHSTRPPCTSPSK 559
S R P T +K
Sbjct: 122 FESLRCPATYLAK 134
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660
+ MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 119 ETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 156 EEVAALVVDNGSGMCKAGFAGXDAPRAVFPS 248
+EV+A+V+D GS + GF+G D P+ V PS
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPS 39
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 PRHQGVMVGMGXKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 433
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 434 VAPEEHPVLLTEAPLNPKANREKM 505
V P E+ +++TE NP++ R+++
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQI 120
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +1
Query: 481 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 660
PQ +++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G +
Sbjct: 113 PQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLII 172
Query: 661 PHAILR 678
I +
Sbjct: 173 RKGIFK 178
Score = 33.9 bits (74), Expect = 0.036
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 156 EEVAALVVDNGSGMCKAGFAGXDAPRAVFPS 248
EE+ +LV+D GS + G+AG ++P + PS
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS 38
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 VGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 484
VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +TE NP
Sbjct: 69 VGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANP 127
Query: 485 KANREKMT 508
R MT
Sbjct: 128 TYVRSTMT 135
Score = 39.9 bits (89), Expect = 6e-04
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 651
+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G
Sbjct: 136 ELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
Score = 31.9 bits (69), Expect = 0.15
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 171 LVVDNGSGMCKAGFAGXDAPRAVFPSIV 254
LV+DNGS +AG+ G P+ VF ++V
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLV 54
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 34.3 bits (75), Expect = 0.027
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 508 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 651
Q FE P +A + ++ LYA G G+V+D G + PI +G
Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
Score = 25.8 bits (54), Expect = 9.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 356 PIEHGIVTNWDDMEKIWHHTF 418
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 539 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 536 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 536 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 536 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 673
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.26
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 673
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 29.9 bits (64), Expect = 0.59
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 673
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 28.7 bits (61), Expect = 1.4
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Frame = +2
Query: 464 TEAPLNPKANREKMTRSCSKHSTRPPCTSPSK--PCSRCTRPVVPPVSCWTPATVSPTPC 637
T P+ P + T S +T CT+ + P T PV P TV PT
Sbjct: 259 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTP--------TVPPT-- 308
Query: 638 PSTRDTHSPTPSCVWTLXGRDLHRLPHEDSS 730
ST T +P P + G LP +S
Sbjct: 309 -STSSTSTPPPPASTSSTGTSSSPLPSTSTS 338
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Frame = +2
Query: 464 TEAPLNPKANREKMTRSCSKHSTRPPCTSP-------SKPCSRCTRPVVPPVS-CWTPAT 619
T P+ P + T S +T CT+ S S P VPP S T
Sbjct: 203 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIP 262
Query: 620 VSPTPCPSTRDTHSPTPS 673
+ PT ST SP P+
Sbjct: 263 IPPTSTSSTDTNSSPLPT 280
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 512 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTP 670
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 30.3 bits (65), Expect = 0.45
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 419 YNELRVAPEEHPVLLTEAPLNPK-ANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 595
Y+EL +A +E P L P PK A++ K + K + S KP S+ TRP +P
Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77
Query: 596 VSCWTPATVSPTPCP 640
+ T +V P P P
Sbjct: 78 YTRLT-YSVPPLPIP 91
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 29.5 bits (63), Expect = 0.78
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 293 VPYRPSRPDGGAFHDRGEHGARSIXSCETGLAHT 192
VPY PS+P+GGA+ G H R + + L T
Sbjct: 88 VPY-PSKPNGGAYQGIGFHYGRFVMNLRKALTST 120
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 416 FYNELRVAPEEHPVLLTE--APLNPKANREKMTRSCSKHSTRP 538
+Y L E+HP+LLT+ A L P+ + ++ R K P
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 560 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 664
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 2.4
Identities = 28/111 (25%), Positives = 39/111 (35%)
Frame = +2
Query: 470 APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 649
+P++P ANR R S PP + KP + R V S +P + P T
Sbjct: 146 SPISPSANRNDSKRQASSFRRSPPSSVHMKPSAFNGRKVSRRPSS-SPPPIPSIP-HETT 203
Query: 650 DTHSPTPSCVWTLXGRDLHRLPHEDSSTERGXXVQLPXPNREIRAFTXRRS 802
+ + S V + + H H ER P R T R S
Sbjct: 204 SSDTQKKSSVSSGFPENKHGKFHFHIPNERRSRFDQPPSKRMALTSTARES 254
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 2.4
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +2
Query: 410 HTFYNELRVAPEEHPVLL---TEAPLNPK----ANREKMTRSCSKHSTRPPCTSPSKPCS 568
H +N +P +P L T P NP A + S+H + +PS +
Sbjct: 201 HPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN 260
Query: 569 RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 664
P+ P ++ W P T PT P + + + P
Sbjct: 261 HTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 560 PCSRCTRPVVPPVSCWTPATVSPTPCPST 646
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 536 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 643
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 7.3
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +2
Query: 395 EKIWHHTFYNELRVAPEEHPVLLTE-APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSR 571
E+I T E P H + T AP+ PK ++ + S T P TS + P +
Sbjct: 784 EEIQRLTMLLEPHAVPPIHQIKQTGYAPVQPKTSQ-----ASSILPTVPRTTSYTSPYAT 838
Query: 572 CTRPVVPPVSCWTPATVSPTPCPSTRDT 655
+ + TPA V P P PST T
Sbjct: 839 TSSHI-------TPADVHPLPPPSTSTT 859
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +2
Query: 470 APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPV---VPPVSCWTPATVSPTPCP 640
AP+ PKA + PP P + PV +P V+ P++V+P P
Sbjct: 1456 APVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP 1515
Query: 641 ST 646
S+
Sbjct: 1516 SS 1517
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 542 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 685
C +PS+ C + PV + T S TP P+T + +PTP+ T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,714,032
Number of Sequences: 5004
Number of extensions: 74728
Number of successful extensions: 276
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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