Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1240
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical p...    33   0.16 
Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical
           protein F36G9.12 protein.
          Length = 707

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 79  IYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           + K ++ F LW N E+I ++   KV FI C+ CIR
Sbjct: 243 LLKILISFSLWTNAELILSVKEQKVGFIKCLDCIR 277


>Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 76  KIYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           +I + ++ F LW N E++ ++   K  FI C+ CIR
Sbjct: 232 RILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIR 267


>Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical
           protein F28G4.5 protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 76  KIYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           +I + ++ F LW N E++ ++   K  FI C+ CIR
Sbjct: 224 RILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIR 259


>Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 76  KIYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           +I + ++ F LW N E++ ++   K  FI C+ CIR
Sbjct: 232 RILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIR 267


>Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical
           protein C31A11.5 protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 76  KIYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           +I + ++ F LW N E++ ++   K  FI C+ CIR
Sbjct: 232 RILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIR 267


>Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical
           protein F09B9.1 protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 49  WGVKVIFIEKIY-KFIVYFVLWGNFEII*NLIILKVNFIYCILCIRVY 189
           +G+K I    ++ K ++ F LW N E++ ++   K  FI  + CIR++
Sbjct: 220 YGIKSIKERNVFLKILLSFSLWTNAELLLSVKEQKPGFIKSLDCIRLF 267


>Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical
           protein F14F8.3 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 8/40 (20%), Positives = 26/40 (65%)
 Frame = +1

Query: 49  WGVKVIFIEKIYKFIVYFVLWGNFEII*NLIILKVNFIYC 168
           W + ++F    +  I +F++ G F+++   ++++V++++C
Sbjct: 246 WALGLVFWAD-FSVIHFFIICGGFDLLSTPVLIQVSYLFC 284


>Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical
           protein C31A11.7 protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 79  IYKFIVYFVLWGNFEII*NLIILKVNFIYCILCIR 183
           I K ++ F LW N  ++ ++   K  FI C+ CIR
Sbjct: 240 IMKMLLTFSLWTNAGVLLSVKEQKPGFIKCLDCIR 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,678,347
Number of Sequences: 27780
Number of extensions: 92301
Number of successful extensions: 157
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)