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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1236
         (671 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch...    61   1e-10
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c...    58   9e-10
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom...    55   1e-08
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch...    52   1e-07
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch...    35   0.009
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual         30   0.35 
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase...    28   1.4  
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy...    27   1.9  
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ...    27   1.9  
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    27   3.3  
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc...    25   7.5  
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom...    25   7.5  
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S...    25   9.9  
SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces po...    25   9.9  
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po...    25   9.9  

>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 356

 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 25/47 (53%), Positives = 29/47 (61%)
 Frame = +2

Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHA 649
           S HCR C +CV K DHHC WIN CVG  N  YF  FL+  +   FH+
Sbjct: 171 SKHCRLCNICVEKFDHHCIWINNCVGLNNARYFFLFLLCTIQLLFHS 217


>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 329

 Score = 58.4 bits (135), Expect = 9e-10
 Identities = 24/52 (46%), Positives = 30/52 (57%)
 Frame = +2

Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVLS 664
           SHHC +C  C+L+MDHHC W   CVG  NH +F  FL    L  +   V+ S
Sbjct: 110 SHHCSQCNKCILRMDHHCMWFKNCVGFRNHKFF--FLECFYLNLYSICVLYS 159



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 494 IQGSTSHHCRKCGLCVLKMDHHCPWINCCVGHANH 598
           +Q   S  C KC        HHC   N C+   +H
Sbjct: 91  LQNGKSRFCEKCQEYKCDRSHHCSQCNKCILRMDH 125


>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
           HC  C  CV  +DHHC W+N C+G  N+ Y+  FL+  VL   +
Sbjct: 197 HCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLSVVLSALY 240


>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 642

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +2

Query: 491 RIQGSTSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFL 619
           +++   S+HC  C  C+ + DHHCPW   CVG  NH  F  F+
Sbjct: 407 QVKPPRSYHCGACKRCINRYDHHCPWTGNCVGARNHRTFLLFV 449


>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 312

 Score = 35.1 bits (77), Expect = 0.009
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMF 625
           SHH R    C+ K DH+C ++   V  +N  +F  FL +
Sbjct: 126 SHHSRVSMRCIRKFDHYCSFVGKDVCFSNQKFFYQFLFY 164


>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 503

 Score = 29.9 bits (64), Expect = 0.35
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 147 LMNPAHSVSKLIEPELILENNGSLSVSTIIALGSHIVLGI 266
           +++P +     ++PEL+L+  G  SV T     SH + G+
Sbjct: 208 ILSPGYEQENTLKPELVLQMEGMDSVQTCEEAASHCMTGL 247


>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
           Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1448

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 135 KNDLLMNPAHSVSKLIEPELILENNGSLSVSTIIALGS 248
           +N L+   A S  K I+ + +LEN GSL+   I+ +GS
Sbjct: 641 RNPLVYPSAKSSIKSIDIKRVLENVGSLNHEDILLIGS 678


>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 794

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 480 CKIVDIGHPLLCQAAIPKARTQVPQVMIARNNI 382
           C I+D+    +    IPK R  +PQ + + NN+
Sbjct: 184 CPIIDVDQKKVIAIDIPKVRRPIPQDVNSDNNL 216


>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 293

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +2

Query: 512 HHCRKCG--LCVLKMDHHCP 565
           HHCR+CG   C L  D + P
Sbjct: 176 HHCRRCGDIFCALHCDRNIP 195


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 466 YWASSSLSGCHPKGTNPGPSSNDC 395
           Y  SS+ S CH  G  PG   + C
Sbjct: 234 YSVSSTCSSCHGSGLQPGSHKSTC 257


>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
            Sap155|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1188

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 228  TIIALGSHIVLGIIKL-ITWAMVHMLGMWWP 317
            T  ++  H+ LG + L +  AM+H+L + WP
Sbjct: 1071 TAASVIKHLSLGCVGLGVEDAMIHLLNILWP 1101


>SPCC1442.02 ||SPCC1450.18|DUF1760 family
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 562

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -3

Query: 114 MFIHHLIYSIFDTRSRVLMILNQEKYCI 31
           +F+++ + S+F   + +L I + E YC+
Sbjct: 140 LFVNNFLISLFSGLANILQIDSDELYCV 167


>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1842

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 529  WLVRFEDGPSLPVDKLLRWSR 591
            W VRF+ G S+ + K LR+ R
Sbjct: 1120 WSVRFKRGTSMLIPKALRFDR 1140


>SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 163

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 402 LLEGPGFVPLGWQPDKEE 455
           L+  PG  P+GW+P  EE
Sbjct: 95  LISPPGSPPVGWEPIVEE 112


>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1396

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
 Frame = +1

Query: 292 STCWECGGPLKLHSMHRFMQ-QCSCHLLREHYIISCNHYLRDLGSCLWD----GSLTKKR 456
           S C E    +   ++ R ++  CSC L    Y    +HY+R +   + D    G     R
Sbjct: 155 SYCGEGHSKVATITVRRLLEFVCSCRLPASKYDHPRSHYIRRICEIIRDAFDLGDFYNHR 214

Query: 457 MPNIYNFAQFVK---DTRLHVTPL*EMWLVRFEDGPSLPVDKLL 579
           +  ++N    +K      +   PL + W     D  S+ V  +L
Sbjct: 215 ILRVFNSGDQIKVDVAQTMCARPLIQCWDNNMRDFDSISVIDIL 258


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,246,178
Number of Sequences: 5004
Number of extensions: 75533
Number of successful extensions: 213
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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