Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1236
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0043 + 14016958-14017106,14017198-14017291,14018488-140185... 63 2e-10
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 57 1e-08
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 54 8e-08
11_05_0069 - 18814789-18815326,18815742-18816001,18816077-188166... 53 2e-07
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 53 2e-07
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 53 2e-07
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 53 2e-07
12_01_0934 - 9273325-9273807,9273898-9274062,9274155-9274235,927... 52 4e-07
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 52 4e-07
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 52 4e-07
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 50 1e-06
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 50 1e-06
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 49 3e-06
01_06_1317 - 36251231-36251341,36252514-36252609,36252879-362529... 49 4e-06
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013... 48 7e-06
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 46 2e-05
02_05_1239 + 35174901-35174903,35175001-35175102,35175180-351752... 46 4e-05
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 45 6e-05
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453... 44 8e-05
03_02_0110 - 5678057-5678794,5679279-5679470,5679971-5680087,568... 36 0.029
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 34 0.12
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 32 0.48
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 31 1.1
03_01_0325 + 2529875-2529922,2530181-2530279,2530958-2531055,253... 29 2.6
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 29 3.4
07_01_0236 - 1725061-1727070 29 3.4
01_01_0610 + 4533141-4533310,4534889-4535075,4535232-4535323,453... 29 4.5
03_02_0535 + 9277995-9278049,9278140-9278274,9278722-9278788,927... 28 5.9
01_06_0392 + 28964006-28964204,28964496-28964977,28965075-28965176 28 5.9
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 28 7.8
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 7.8
>03_03_0043 +
14016958-14017106,14017198-14017291,14018488-14018582,
14018658-14018825,14019091-14019163,14019236-14019288,
14019720-14019811,14020141-14020193,14020272-14020397,
14020710-14020955
Length = 382
Score = 63.3 bits (147), Expect = 2e-10
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
HCR C CV + DHHC W+N C+G N YF FL++ L C + +V+L
Sbjct: 175 HCRICDKCVARFDHHCGWMNNCIGEKNTRYFVAFLVWHFLICLYGAVIL 223
>01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 57.2 bits (132), Expect = 1e-08
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVV 658
HC C CV K DHHCPW+ C+G N+ +F F+ + L C + VV
Sbjct: 923 HCSICNNCVRKFDHHCPWVGQCIGLRNYRFFFLFISTSTLLCVYVFVV 970
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 54.4 bits (125), Expect = 8e-08
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ L C +
Sbjct: 138 HCSICNNCVERFDHHCPWVGQCIGRRNYRFFYMFVFSTTLLCLY 181
>11_05_0069 -
18814789-18815326,18815742-18816001,18816077-18816631,
18816907-18817062
Length = 502
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASV 655
HC C CV + DHHCPW+ C+G N+ +F F+ C + V
Sbjct: 213 HCSVCNNCVDRFDHHCPWVGQCIGKRNYRFFFMFISSTTFLCLYVFV 259
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ L C +
Sbjct: 175 HCSICNNCVERFDHHCPWVGQCIGKRNYRFFFMFVSSTTLLCVY 218
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ L C +
Sbjct: 253 HCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLY 296
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ L C +
Sbjct: 184 HCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLY 227
>12_01_0934 -
9273325-9273807,9273898-9274062,9274155-9274235,
9274347-9274475,9274590-9274661,9274758-9274826,
9275143-9275514,9275590-9275703,9275729-9275848
Length = 534
Score = 52.0 bits (119), Expect = 4e-07
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
S HC+ C CV DHHC W+N C+G N+ F + F +L
Sbjct: 207 SKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASFILLMFFVLL 248
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +2
Query: 494 IQGSTSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVV 658
I+ S HC C CV + DHHCPWI+ CVG N F FL F + +
Sbjct: 380 IRPMRSKHCPTCKHCVEQFDHHCPWISNCVGRRNKWDFFVFLCMGTTTAFLGAAI 434
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAV 631
S HC C CV + DHHCPW++ C+G N F FL+ V
Sbjct: 377 SKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWEFFMFLILEV 417
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
S HCR C CV DHHC W+N C+G N+ F + AVL
Sbjct: 217 SKHCRVCDKCVDGFDHHCRWLNNCIGKRNYKRFFILMASAVL 258
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 50.4 bits (115), Expect = 1e-06
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAV 631
S HC C CV + DHHCPW++ C+G N F F+ V
Sbjct: 412 SKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWEFFMFITLEV 452
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAV 631
S HCR C CV DHHC W+N CVG N Y T + AV
Sbjct: 120 SKHCRSCDKCVDGFDHHCRWLNNCVGRKN--YVTFLCLMAV 158
>01_06_1317 -
36251231-36251341,36252514-36252609,36252879-36252956,
36253037-36253138,36254509-36254784
Length = 220
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 539 VLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
+ + DHHC WIN CVGH N+ F F+++AV+ ++ V++
Sbjct: 89 IKRKDHHCIWINNCVGHENYKIFLVFVLYAVVASLYSLVLV 129
>07_03_1133 -
24199643-24200422,24200786-24200968,24201241-24201321,
24201439-24201567,24201814-24201885,24201970-24202038,
24202130-24202513,24203813-24203926,24204033-24204074
Length = 617
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYF----TTFLMFAVLGCFHASVVLSIC 670
S HCR C CV DHHC W+N C+G N+ F T+ L +L +VL C
Sbjct: 185 SKHCRVCDKCVDGFDHHCRWLNNCIGKRNYMRFFILMTSSLFLLILQSAVGVLVLVFC 242
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 491 RIQGSTSHHCRKCGLCVLKMDHHCPWINCCVG 586
R + S HC C CV K DHHCPW+ C+G
Sbjct: 162 RYRPPRSSHCSICNNCVEKFDHHCPWVGQCIG 193
>02_05_1239 +
35174901-35174903,35175001-35175102,35175180-35175248,
35176466-35176561,35176724-35176813
Length = 119
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 548 MDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVV 658
MDHHC WIN CVG+AN+ F ++ A +G ++ VV
Sbjct: 1 MDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFVV 37
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 44.8 bits (101), Expect = 6e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFL 619
HC C CVL+ DHHC W+ C+ N+ F ++
Sbjct: 147 HCHDCDKCVLQFDHHCVWLGTCIAKRNYCRFWWYI 181
>05_04_0438 +
21244735-21244782,21245089-21245274,21245307-21245384,
21245385-21245678,21246137-21246262,21246935-21247168,
21247534-21248061
Length = 497
Score = 44.4 bits (100), Expect = 8e-05
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHG 601
HC C CV + DHHCPW+ C+G G
Sbjct: 178 HCSICNNCVERFDHHCPWVGQCIGQGLFG 206
>03_02_0110 -
5678057-5678794,5679279-5679470,5679971-5680087,
5680331-5680402,5680444-5680569,5681086-5681445,
5681944-5682057,5682158-5682199
Length = 586
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 19/73 (26%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHC-------------------PWINCCVGHANHGYFTTFLMFAV 631
S HCR C CV DHHC W+N C+G N+ F + AV
Sbjct: 177 SKHCRVCDKCVDGFDHHCRVRYTSFVFPNGYTLSPLNNWLNNCIGKRNYKGFFLLMTSAV 236
Query: 632 LGCFHASVVLSIC 670
L ++VL +C
Sbjct: 237 LLWLSGALVLILC 249
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 337 HRFMQQCSCHLLREHYIISCNHYLRDLGSCLWDGSLTKKRMPN-IYNFAQFVKDTRLH 507
H F+ +CS L H+++S + D C+ G T+K MP I++FA ++ H
Sbjct: 446 HLFLSECSFVTLLSHFLLSTGQSILDFAECI-KGE-TRKNMPEAIFSFASCSTNSAKH 501
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHC 562
S HCR C CV DHHC
Sbjct: 164 SKHCRSCDKCVDGFDHHC 181
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 286 AHVINFIIPKTIWDPSAIIVETEREPLFSNMSSGSINLLTE*AGFINKSF 137
+H+ NF +PKT D T REP FS ++ L+TE F+ + F
Sbjct: 308 SHIYNFDLPKTAIDYLHRAGRTGREP-FSKLACSVTTLITEDEHFVLQRF 356
>03_01_0325 +
2529875-2529922,2530181-2530279,2530958-2531055,
2531945-2532031,2532652-2532684,2532813-2532890,
2533059-2533183,2533267-2533349,2533436-2533527,
2533611-2533680,2533760-2533829,2533919-2534073
Length = 345
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
Frame = +2
Query: 515 HCRKCGLC---VLKMDHHC 562
HC KCG C VLK HHC
Sbjct: 185 HCDKCGCCYSYVLKDSHHC 203
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 289 WSTCWECGGPLKLHSMHRFMQQCSCHLLREHYIISCNH 402
WS C G L ++HRF C L H SC+H
Sbjct: 610 WSECRRSG----LRNIHRFSWPHHCRLYLSHVAASCDH 643
>07_01_0236 - 1725061-1727070
Length = 669
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 480 CKIVDIGHPLLCQAAIPKARTQVPQVM-IARNNIMFPQQMTGTLL-HEAMHRM 328
C + +G LLC ++P AR + QVM +I FP ++ LL HE +
Sbjct: 597 CLALKLG--LLCSHSLPSARPNMRQVMQFLDGDISFPDEVLAQLLSHEGQEHI 647
>01_01_0610 +
4533141-4533310,4534889-4535075,4535232-4535323,
4536203-4536308,4536441-4536649,4537049-4537091,
4537413-4537645,4537762-4538233
Length = 503
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 340 RFMQQCSCHLLREHYIISCNHYLRDLGSCLWDGSLTKKRMPNIYNFAQFVKD---TRLHV 510
R M++ S LR+H I+SC L + LWD + +PNI Q D T LH+
Sbjct: 322 RTMKKASVLALRDHRILSC-EMLPSEWALLWD-IRKSQELPNIVAELQSESDEPVTFLHL 379
Query: 511 TP 516
P
Sbjct: 380 DP 381
>03_02_0535 +
9277995-9278049,9278140-9278274,9278722-9278788,
9278948-9279044,9279156-9279252,9279640-9279680,
9280314-9280379,9281776-9281848,9282390-9282502,
9282916-9283089
Length = 305
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCV 583
HC C V DHHCP C+
Sbjct: 128 HCNCCKANVRGYDHHCPAFGNCI 150
>01_06_0392 + 28964006-28964204,28964496-28964977,28965075-28965176
Length = 260
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -2
Query: 442 GCHPKGTNPGPSSNDCKK*YNVPAANDRNIAA*SDA*NEV*GGHHIPSMWTMAHV 278
G HP G++ G ++N+ K +ND + DA ++ G HH+PS + HV
Sbjct: 17 GDHPAGSDDGGNNNNNKNNAAENGSNDSSRRR--DAASD--GNHHLPSRPNVPHV 67
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 521 RKCGLCVLKMDHHCPW-INCCVGHANHGYFTTFLMF 625
R +C++ D H I+CC HG FL+F
Sbjct: 697 RGVDMCIMNKDGHTARDISCCASTLEHGRLRYFLLF 732
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 132 FFSIFTMFIHHLIYSIFDTRSRVLMIL 52
FFSI T F++ Y +FDT V+ +L
Sbjct: 271 FFSICTGFVYFQEYQVFDTLRIVMFVL 297
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,651,096
Number of Sequences: 37544
Number of extensions: 476403
Number of successful extensions: 1310
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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