Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1236
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 75 3e-14
At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein ... 75 4e-14
At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein ... 71 7e-13
At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein ... 66 2e-11
At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein ... 61 8e-10
At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein ... 60 1e-09
At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein ... 60 1e-09
At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein ... 57 1e-08
At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein ... 55 4e-08
At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein ... 55 5e-08
At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein ... 54 7e-08
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 54 9e-08
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 54 9e-08
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 54 1e-07
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 53 2e-07
At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein ... 52 3e-07
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 52 5e-07
At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein ... 52 5e-07
At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein ... 52 5e-07
At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein ... 52 5e-07
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 51 6e-07
At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein ... 51 8e-07
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ... 51 8e-07
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 50 1e-06
At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein ... 43 2e-04
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 40 0.002
At1g34480.1 68414.m04285 DC1 domain-containing protein contains ... 30 1.6
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g... 29 2.8
At1g51420.1 68414.m05788 sucrose-phosphatase, putative similar t... 28 6.5
At5g36870.1 68418.m04417 glycosyl transferase family 48 protein ... 27 8.6
At2g32415.1 68415.m03961 3'-5' exonuclease domain-containing pro... 27 8.6
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 8.6
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 8.6
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 75.4 bits (177), Expect = 3e-14
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVV 658
+HHCR CG+CVL MDHHCP+I CVG NH YF FL+ AV+ +A+V+
Sbjct: 161 THHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAFLISAVISTSYAAVM 210
>At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 286
Score = 74.9 bits (176), Expect = 4e-14
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
+HHCR C CVL+MDHHC WIN CVGH N+ F F+++AV C ++ V+L
Sbjct: 110 AHHCRVCKRCVLRMDHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLL 160
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Frame = +3
Query: 252 IVLGIIKLITWAMVHMLGMWWPPQTSFYASLHAAMFLSFAAGTLYYFLQSLLEGPGFVPL 431
+V+ +I I +A V W TS +AA F + A +Y + ++ PG VPL
Sbjct: 14 VVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIAVFRDPGRVPL 73
Query: 432 GWQPDKEEDAQ----------YLQFCTICKGYKAPR 509
+ PD E+ L++C C +K PR
Sbjct: 74 NYMPDVEDPESPVHEIKRKGGDLRYCQKCSHFKPPR 109
>At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 284
Score = 70.9 bits (166), Expect = 7e-13
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVLSIC 670
+HHCR C CVLKMDHHC WIN CVG+AN+ F + +A + +++V+L C
Sbjct: 118 THHCRVCRRCVLKMDHHCLWINNCVGYANYKAFFILVFYATVASIYSTVLLVCC 171
>At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 307
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +2
Query: 491 RIQGSTSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
+++ S HHC CG CVLKMDHHC W+ CVG N+ YF FL + L ++VL
Sbjct: 134 QLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTLVL 190
>At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 302
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
SHHC CG C+LKMDHHC W+ CVG N+ F FL + L
Sbjct: 129 SHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFL 170
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +3
Query: 237 ALGSHIVLGIIKLITWAMVHMLGMWWPPQT------SFYASLHAAMFLSFAAGTLYYFLQ 398
ALGS ++L +I +I + ++ + + P S + L A F L+ +
Sbjct: 14 ALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFFHFLLIMLLWSYFS 73
Query: 399 SLLEGPGFVPLGWQPD 446
++ PG VP GW+P+
Sbjct: 74 VVVTDPGGVPTGWRPE 89
>At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 316
Score = 60.5 bits (140), Expect = 1e-09
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
S HC C CV + DHHC W+N C+G N YF FL++ L C + +V +
Sbjct: 173 SKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAI 223
>At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 397
Score = 60.5 bits (140), Expect = 1e-09
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
S HC C CV + DHHC W+N C+G N YF FL++ L C + +V +
Sbjct: 173 SKHCSICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAI 223
>At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain;
low similarity to SP:Q96GR4 Zinc finger DHHC domain
containing protein 12 (Zinc finger protein 400) {Homo
sapiens}
Length = 288
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCF 643
S HC C CV + DHHCPWI+ CVG N YF F++ L F
Sbjct: 128 SKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYFLVFVIMGALTSF 172
>At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 476
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASV 655
HC C CV K DHHCPW+ C+G N+ ++ F++ + L C + V
Sbjct: 173 HCSICNNCVEKFDHHCPWLGQCIGLRNYRFYFMFVLCSTLLCIYVHV 219
>At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 374
Score = 54.8 bits (126), Expect = 5e-08
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ YF F+ + L C +
Sbjct: 151 HCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIY 194
>At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 386
Score = 54.4 bits (125), Expect = 7e-08
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASV 655
HC C CV + DHHCPW+ C+ N+ YF F+ + L C + V
Sbjct: 150 HCSICNNCVQRFDHHCPWVGQCIALRNYPYFICFISTSTLLCLYVFV 196
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 506 TSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
+S HCR C CV DHHC W+N CVG N+ F ++F +L
Sbjct: 161 SSKHCRTCNRCVEGFDHHCRWLNNCVGKKNYTTFILLMVFVLL 203
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 54.0 bits (124), Expect = 9e-08
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASV 655
HC C CV + DHHCPW+ C+ N+ +F FL + L C + V
Sbjct: 157 HCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFLSCSTLLCIYVFV 203
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 53.6 bits (123), Expect = 1e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ L C +
Sbjct: 164 HCSICNNCVERFDHHCPWVGQCIGMRNYRFFFMFVFSTTLLCIY 207
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
HC C CV + DHHCPW++ CVG N F FL+ VL
Sbjct: 358 HCSTCDRCVEQFDHHCPWVSNCVGKKNKWEFFLFLLLEVL 397
>At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 477
Score = 52.0 bits (119), Expect = 3e-07
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+G N+ +F F+ + C +
Sbjct: 161 HCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFISTSTTLCIY 204
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 51.6 bits (118), Expect = 5e-07
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW+ C+ N+ +F F+ L C +
Sbjct: 162 HCSICNNCVERFDHHCPWVGQCIAQRNYRFFFMFVFSTTLLCVY 205
>At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 340
Score = 51.6 bits (118), Expect = 5e-07
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 497 QGSTSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFL 619
Q + HC C CVL+ DHHC W+ C+G NH F ++
Sbjct: 171 QPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYI 211
>At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 51.6 bits (118), Expect = 5e-07
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAV 631
S HCR C CV + DHHC W+N C+G N+ F + ++ A+
Sbjct: 176 SKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLMVSAI 216
>At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 51.6 bits (118), Expect = 5e-07
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAV 631
S HCR C CV + DHHC W+N C+G N+ F + ++ A+
Sbjct: 176 SKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLMVSAI 216
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 51.2 bits (117), Expect = 6e-07
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFL 619
S HCR CG CV DHHC W+N CVG N+ F +
Sbjct: 157 SKHCRSCGKCVDGFDHHCRWLNNCVGQKNYISFVCLM 193
>At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 262
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 527 CGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVL 661
C CVLKMDHHC WI CVG N+ +F FL + L +VL
Sbjct: 75 CQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIVL 119
>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 706
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
S HCR C CV DHHC W+N CVG N+ F + + ++L
Sbjct: 185 SKHCRSCDKCVDCFDHHCKWLNNCVGRKNYVTFVSLMSASLL 226
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 509 SHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVL 634
S HCR C CV DHHC W+N CVG N+ F + + ++L
Sbjct: 187 SKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMTFISLMAVSLL 228
>At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 339
Score = 43.2 bits (97), Expect = 2e-04
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYF 607
HC C CV + DHHCPW+ C+ + F
Sbjct: 186 HCSICNNCVQRFDHHCPWVGQCIARTTYENF 216
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 515 HCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFH 646
HC C CV + DHHCPW N+ YF F+ A + C +
Sbjct: 151 HCSICNNCVERFDHHCPW-------RNYRYFFMFVSSATILCIY 187
>At1g34480.1 68414.m04285 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 602
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 161 SFCK*INRTRTHIGKQWFSLRFDDYCTGVPYRFRY 265
S CK ++TR GK F L F YC +P +FRY
Sbjct: 444 SICKVRSQTRFDCGKCDFVLCF--YCATIPMKFRY 476
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 429 LGWQPDKEEDAQYLQ-FCTICKGYKAPRHTTV 521
L + P E D+Q L+ FC CKG P H V
Sbjct: 225 LKFAPSTEGDSQQLKWFCDACKGIPQPMHPPV 256
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 429 LGWQPDKEEDAQYLQ-FCTICKGYKAPRHTTV 521
L + P E D+Q L+ FC CKG P H V
Sbjct: 249 LKFAPSTEGDSQQLKWFCDACKGIPQPMHPPV 280
>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-glucan
synthase 1 nearly identical to callose synthase 1
catalytic subunit [Arabidopsis thaliana] GI:13649388
Length = 1922
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 132 IKNDLLMNPAHSVSKLIEPELILENNGSLSVSTIIALGSHIVLGIIKLITWAM 290
+ D M A + L++ LE +G + TI+ L HI G + + W M
Sbjct: 1310 MNQDNYMEEAFKMRNLLQE--FLEKHGGVRCPTILGLREHIFTGSVSSLAWFM 1360
>At1g51420.1 68414.m05788 sucrose-phosphatase, putative similar to
sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
GI:11127757; contains Pfam profile PF05116:
Sucrose-6F-phosphate phosphohydrolase
Length = 423
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 481 VQNCRYWASSSLSGCHPKGTNPGPS 407
V+NC + SS + CHP G PS
Sbjct: 303 VENCTTYTSSLKASCHPSGVFVHPS 327
>At5g36870.1 68418.m04417 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1862
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 132 IKNDLLMNPAHSVSKLIEPELILENNGSLSVSTIIALGSHIVLGIIKLITWAM 290
+ D + A + L++ LE NG + TI+ L HI + + W M
Sbjct: 1259 MNQDYYIEEAFKMRNLLQE--FLEKNGGVRYPTILGLREHIFTRSVSCLAWFM 1309
>At2g32415.1 68415.m03961 3'-5' exonuclease domain-containing
protein similar to SP|Q12149 Exosome complex exonuclease
RRP6 (EC 3.1.13.-) (Ribosomal RNA processing protein 6)
{Saccharomyces cerevisiae}
Length = 880
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 227 DDYCTGVPYRFRYNKINNMGHGPHAGNVV 313
D C G + +K++ +GHGPH +V
Sbjct: 791 DTQCNGNTLHQQNSKLSLLGHGPHGKQIV 819
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 132 IKNDLLMNPAHSVSKLIEPELILENNGSLSVSTIIALGSHIVLGIIKLITWAM 290
+ D M A + L++ L+ +G + TI+ L HI G + + W M
Sbjct: 1347 MNQDNYMEEAFKMRNLLQEFLV--KHGGVRTPTILGLREHIFTGSVSSLAWFM 1397
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 605 NTHG*RDQRNNLSTGNDGPSSKRTSHISYSGVTWSLVSFTNCAKL*ILGILFFVRLPSQR 426
N H R+N ++ DG +S++++ +Y+ T + + + +FFVR ++
Sbjct: 230 NNHSGGSNRHNANSNGDGGTSQQSNESNYTEKTVIGIGIAGVLVILFIAGVFFVRRKQKK 289
Query: 425 --HEPRS 411
PRS
Sbjct: 290 GSSSPRS 296
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,834
Number of Sequences: 28952
Number of extensions: 391596
Number of successful extensions: 1056
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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