Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1228
         (747 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M23561-1|AAA28367.1|  333|Drosophila melanogaster protein ( D.me...    29   5.1  
AY051911-1|AAK93335.1|  333|Drosophila melanogaster LD39923p pro...    29   5.1  
AE014297-518|AAO41515.1|  333|Drosophila melanogaster CG2198-PC,...    29   5.1  
AE014297-517|AAF54084.1|  333|Drosophila melanogaster CG2198-PA,...    29   5.1  
AE014297-516|AAN13372.2|  341|Drosophila melanogaster CG2198-PB,...    29   5.1  
AE001572-7|AAD19797.1|  333|Drosophila melanogaster Immunoglobul...    29   5.1  
AY060627-1|AAL28175.1|  390|Drosophila melanogaster GH04687p pro...    29   8.9  
AE013599-1544|AAF58481.1|  390|Drosophila melanogaster CG33671-P...    29   8.9  

>M23561-1|AAA28367.1|  333|Drosophila melanogaster protein (
           D.melanogaster amalgamprotein (ama) gene, complete cds.
           ).
          Length = 333

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 264 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 297


>AY051911-1|AAK93335.1|  333|Drosophila melanogaster LD39923p
           protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 264 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 297


>AE014297-518|AAO41515.1|  333|Drosophila melanogaster CG2198-PC,
           isoform C protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 264 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 297


>AE014297-517|AAF54084.1|  333|Drosophila melanogaster CG2198-PA,
           isoform A protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 264 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 297


>AE014297-516|AAN13372.2|  341|Drosophila melanogaster CG2198-PB,
           isoform B protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 272 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 305


>AE001572-7|AAD19797.1|  333|Drosophila melanogaster
           Immunoglobulin-C2-type-domainprotein protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 196 HKNGIPLANKRLNDVCSVAVLG*RTSENIKVESI 297
           HKNG+PL + R ++V + A     T+  ++++S+
Sbjct: 264 HKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSV 297


>AY060627-1|AAL28175.1|  390|Drosophila melanogaster GH04687p
           protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 294 ALNFDVLASSLPKDSYTTDVIEALISEW 211
           A  F +LA    +DSY ++  +ALIS W
Sbjct: 164 ATTFLILAGHFDRDSYLSEANQALISSW 191


>AE013599-1544|AAF58481.1|  390|Drosophila melanogaster CG33671-PA,
           isoform A protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 294 ALNFDVLASSLPKDSYTTDVIEALISEW 211
           A  F +LA    +DSY ++  +ALIS W
Sbjct: 164 ATTFLILAGHFDRDSYLSEANQALISSW 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,723,063
Number of Sequences: 53049
Number of extensions: 642669
Number of successful extensions: 1222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)