Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1226
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.0  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   8.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 112  GNAGSNQPKEWHKDANKSPDHDQGPSSPAKEGE 210
            G  GS  PKE  +   K P   QG     K  E
Sbjct: 927  GEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKE 959


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 424  PPPSHLKTVGNTLISSTILLPSVRV 350
            PP   L  + ++L++  ++LPS R+
Sbjct: 973  PPDEFLDPIMSSLMADPVILPSSRI 997


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 599 PFHCQLLSL*DHASILHQQNICTDVHLLVNHYCNKITM 486
           P    L  L  H  I   + IC D   LVN Y + I++
Sbjct: 652 PLSMHLFILYLHPLITRLEGICCDQDDLVNAYADDISV 689


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,214
Number of Sequences: 2352
Number of extensions: 15046
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)