Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1225X
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            29   0.13 
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   4.8  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   8.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 81  INNYRRKVFKKKLYLMKSILSIHVSYF 1
           + +YR+ +  K  +L K +L+IHV +F
Sbjct: 913 LGSYRQAIILKAPFLQKDVLNIHVRFF 939


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 186 LCLKFGGDNHKAMSTT 139
           LC++ G  NHKA++ T
Sbjct: 257 LCIRCGAANHKAVNCT 272


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 169 WRQSQSDVYDFN 134
           WRQS+SD  DF+
Sbjct: 196 WRQSRSDELDFS 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,347
Number of Sequences: 2352
Number of extensions: 9865
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)