Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1223
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1CMW2 Cluster: ABC transporter, putative; n=1; Aspergi...    36   1.3  
UniRef50_A7D3B0 Cluster: Acetolactate synthase, large subunit, b...    33   6.9  

>UniRef50_A1CMW2 Cluster: ABC transporter, putative; n=1; Aspergillus
            clavatus|Rep: ABC transporter, putative - Aspergillus
            clavatus
          Length = 1448

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +2

Query: 344  NESRTDS--AYDSARSSPARVCHATVTYFNVNDSEDSSSVRTEYTLLDDADRDLEQDRVR 517
            +E R DS  ++DS RSS   V   ++  +    +ED++  +   +  DD  R  E D   
Sbjct: 811  SEGRIDSQGSFDSLRSSDGYVQKLSIEGYTATHAEDTTETQAALSTQDDLVRAAETD--L 868

Query: 518  KISSTKAWSWSVHYEQRA 571
            K   T  WS  V+Y Q A
Sbjct: 869  KDRQTGEWSVYVYYLQAA 886


>UniRef50_A7D3B0 Cluster: Acetolactate synthase, large subunit,
           biosynthetic type; n=1; Halorubrum lacusprofundi ATCC
           49239|Rep: Acetolactate synthase, large subunit,
           biosynthetic type - Halorubrum lacusprofundi ATCC 49239
          Length = 608

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +2

Query: 407 ATVTYFNVNDSEDSSSVRTEYTLLDDADRDLEQ--DRVRKISSTKAW 541
           A V + +++ +E S +V  +Y L+ DA+R LEQ    VR+    +AW
Sbjct: 336 AEVVHIDIDPAEISKNVYADYPLIGDAERILEQLTAAVREAPDAEAW 382


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,309,395
Number of Sequences: 1657284
Number of extensions: 7898482
Number of successful extensions: 24167
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24159
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)