Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1222X
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   4.1  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   5.4  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       22   9.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   9.5  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 138 RKSSRNRVSPSLVRSPSYNGTVDARSEIDVHKF 236
           R+   N +  SL  +P+Y   + +  E+D  KF
Sbjct: 29  RQHLGNWIKDSLHNAPTYTNNMQSMYELDAAKF 61


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 169 LWFAHPRTTARSTRAQK*TCTNS 237
           LW++HPR   + +R  +  C+N+
Sbjct: 6   LWYSHPRKYGQGSRFWR-ACSNN 27


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 112 KAFNQRLLVSERKSASTILHKKSSKVLY*WDN 17
           KA  +RL V   KSA+   H K  KVL+  DN
Sbjct: 101 KALLERLKV---KSAAKRPHMKKKKVLFHQDN 129


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 327 WIATGQTNRERIQLMTRPGVV 389
           W+   +T+R+ +Q   RPG +
Sbjct: 793 WVLDKETHRKSVQRAHRPGAL 813


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,161
Number of Sequences: 2352
Number of extensions: 4853
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)