Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1219
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 53 2e-07
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.022
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 32 0.37
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 31 1.1
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 30 1.5
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 1.5
SB_50935| Best HMM Match : TPR_2 (HMM E-Value=0.00065) 30 2.0
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 30 2.0
SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18) 29 2.6
SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 3.4
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 4.5
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 29 4.5
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.0
SB_29621| Best HMM Match : Halo_GVPC (HMM E-Value=5.3) 28 7.9
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 28 7.9
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +1
Query: 256 KNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 417
KNPLP KD I E + + ++ FD +KLKH +T EKNPLP I QEK++
Sbjct: 699 KNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPDAKTIAQEKAS 750
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/51 (52%), Positives = 29/51 (56%)
Frame = +1
Query: 256 KNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 408
KN LP KD I EK F +G+E F KLKH ET EKNPLP I E
Sbjct: 470 KNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPLPDAQNIRAE 519
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 47 PSLKDLTKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFD--GIEKF 220
PS +D+ + A D +++++ F+ S L+ V+T EK LPSA + E + L D + F
Sbjct: 627 PSQEDIKEEAVDSRAEVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASF 686
Query: 221 DSSQLKHTETQGRTRFRTK 277
D+S+LKH E Q + TK
Sbjct: 687 DASKLKHVEVQEKNPLPTK 705
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +1
Query: 256 KNPLPDKDAIEAEKEKNKFLNGIE--NFDPTKLKHTETCEKNPLPTKDVIEQEK 411
KN LP + I+ E + ++F + E +F+ +KL+H ET EKN LPTKD I EK
Sbjct: 430 KNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK 483
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 KNPLPDKDAIEAEK--EKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 408
KNPLPD I AE E + + FD +KLKH ET EK +PTKDVIE E
Sbjct: 507 KNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 KNPLPDKDAIEAEKEKNKF--LNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 414
KNPLP ++ E ++ + +FD +KLKH E EKNPLPTKD I E +
Sbjct: 659 KNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTEST 713
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 187 PEVFIRRYREV*FEPAEAHRDSGKNP--LPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 360
PEV R F+ ++ K +P KD IEAE ++ +++FD +KLKH
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVV 579
Query: 361 TCEKNPLPTKDVIEQE 408
T EKNPLPT + +E
Sbjct: 580 TQEKNPLPTPQTLHEE 595
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 86 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTET 250
+++++ F S L+ V+T EK LP+ + +A EK + + F G+E F ++LKH ET
Sbjct: 451 RAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVET 504
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +1
Query: 256 KNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 408
K+ +P ++ I+ E ++ +++FD +KLKH ET EKNPLP+ V+++E
Sbjct: 623 KSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEE 671
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 86 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQGRTR 265
+S++ F+TS L+ V+T EK+V+P+ + + E ++ FD S+LKH TQ +
Sbjct: 528 RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNP 585
Query: 266 FRT 274
T
Sbjct: 586 LPT 588
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 86 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTET 250
+S++ F+ + L+ V T EK ++PS ED+ E ++ FD S+LKH ET
Sbjct: 604 RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVET 656
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 KNPLPDKDAIEAEK-EKNK-FLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 408
KNPLP + E KNK + + +FD TKLKH T EK+ +P+++ I++E
Sbjct: 583 KNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +2
Query: 56 KDLTKV-ATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDS 226
KD+ + A D +++++ F+ S L+ V T EK LP+ + + E K+ D E FD
Sbjct: 553 KDVIEAEAIDSRAEVKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDH 612
Query: 227 SQLKHTETQGRT 262
++LKH TQ ++
Sbjct: 613 TKLKHVTTQEKS 624
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 223 FEPAEAHRDSGKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIE 402
+ P + D+ + P + + ++ + FD LKH +T EKN LP+ + I+
Sbjct: 381 YVPHYSVEDTPQQIWPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIK 440
Query: 403 QE 408
QE
Sbjct: 441 QE 442
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 SLKDLTKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 205
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 53 LKDLTKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 232
L DL++V +LKS+ EG CL D++ + DV E I + + +
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKEHENLKSAVSISEGELLK 1183
Query: 233 LKHTETQGRTRFRTKM 280
K+T + F K+
Sbjct: 1184 FKNTLQSEKEEFEKKL 1199
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 120 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVS-RSLIRAS*STPRLREEPASGQRC--YRS 290
SVT T +RL R S L PRS+ T S R+L R S T R C Y+
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGEYKC 497
Query: 291 GEGKEQIPERH 323
KE +P H
Sbjct: 498 SLCKEVVPPDH 508
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Frame = +1
Query: 34 RERHSLPERPHQGRHRPEESARRLQHQ---LSP*RRHQ*KDCASVC*RRRH*E-DPE-VF 198
++RH + PHQ + + ++ +HQ ++HQ K V +RH E D E ++
Sbjct: 879 QQRHKKNDNPHQHQQQKQQHGYHHRHQQKHQQKQQQHQRKTSNRVSTHQRHEEKDTEGLY 938
Query: 199 IRRYREV*FEPA--EAHRDSGKNPLPDKDAI--EAEKEKNK 309
I + +P+ + +RDS K +P + EA + KNK
Sbjct: 939 IHAHLH---QPSYRKENRDSKKTAIPSPKTVRLEASESKNK 976
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 255 EEPASGQRCYRSGEGKEQIPERHRELRSH*AEAHGNVREEP 377
EEP+ + +G KE+ E RE R H + V+EEP
Sbjct: 840 EEPSDEEESEEAGREKEEEEEDQREGRDHNDDEESVVKEEP 880
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -2
Query: 187 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 44
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_50935| Best HMM Match : TPR_2 (HMM E-Value=0.00065)
Length = 1033
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 108 TPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRAS*STPRLRE 257
T ++ +P++ F T P R+ SL+ TVS S R TPR RE
Sbjct: 95 TSVINTLYSPIEPFVFSNTNTEPFRQ-WSLHETVSESYRRTFIRTPRTRE 143
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 187 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 92
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/97 (29%), Positives = 41/97 (42%)
Frame = +3
Query: 27 PAP*ETLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYST 206
P P LPP P P S S PA S P+ + PLR+ + S+
Sbjct: 468 PPPAPALPPLPLPPELPG----SPGDSPPATSPKQPPLPP---KHSNGPPLRQT-PMSSS 519
Query: 207 VSRSLIRAS*STPRLREEPASGQRCYRSGEGKEQIPE 317
+S + + +TPR +P G+RC + EQI E
Sbjct: 520 LSATPVSTPDTTPRTPADPEWGERCVDMFDIIEQIGE 556
>SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18)
Length = 536
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 226 EPAEAHRDSGKNPLPDKDAIEAEKEKNKFLNGIENF 333
EP ++ DS + L D+++IE++ + F + ++NF
Sbjct: 4 EPTDSEGDSSEEDLSDEESIESDGNCSNFSDELQNF 39
>SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +1
Query: 184 DPEVFIRRYREV*FEPAEAHRDSGKNPLPD-----KDAIE-AEKEKNKFLNGIENFDPTK 345
D E I+ ++ + E+ R + NP+PD +AI ++K+K FL+ ++F K
Sbjct: 137 DNETLIKLMQKA-VDDTESERAAANNPIPDICKFYNNAIGCSKKDKCPFLHVCQHFVDGK 195
Query: 346 LKHTETCEK 372
K +TC++
Sbjct: 196 CKFGDTCKR 204
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 PP*KTSPRSPQT*RVSSKASTPAV-SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLI 224
P ++P +P T R S STP S STP + R T ST S
Sbjct: 383 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPST 442
Query: 225 RAS*STPRLREEPAS 269
++ STP L P++
Sbjct: 443 PSTPSTPSLTHTPST 457
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 51 P*KTSPRS-PQ-T*RVSSKASTPAVSVTSTPMK-RLCFRLLKTSPLRRPRSLYSTVSRSL 221
P TSPR+ P+ + R S +AS S S+P R R K+SP PRS T SR L
Sbjct: 321 PEVTSPRATPRASPRASPRASPRDQSSHSSPRNSRNSSR--KSSPKPSPRSSRPTSSRKL 378
Query: 222 IRAS*STPRLREEPASGQR 278
R S R P SGQ+
Sbjct: 379 SRKS---SRKSSRPTSGQQ 394
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 182 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 66
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 438 VTRKCISLVSPYFNIDVSQIDL 503
+ KC L+SPY ++D+ DL
Sbjct: 13 IAAKCTQLISPYLDLDIKYFDL 34
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 82 VCGDLGEVFQGGSVSHGAGHCESIYF 5
VC D G + G+VS+G HC + Y+
Sbjct: 271 VCEDNGRWYLHGAVSYGKLHCPTTYY 296
>SB_29621| Best HMM Match : Halo_GVPC (HMM E-Value=5.3)
Length = 471
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 122 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQGRT 262
RD TN++I+L ED+ +K + D I D+ L+ E + T
Sbjct: 413 RDEATNDQIILDGEEDLLDIDQEKCVEDQIPLDDAKYLQDVEQKSLT 459
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 227 SNQTSRYRRIKTSGSSQ-WR 171
+N+TS+YRRI+ GS Q WR
Sbjct: 62 TNRTSKYRRIRRRGSRQTWR 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,116,233
Number of Sequences: 59808
Number of extensions: 457252
Number of successful extensions: 1504
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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