Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1219
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.71 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   0.94 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   0.94 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.8  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 581 RGCCTSPLPRQCCH 540
           +G C  P PR+CCH
Sbjct: 190 QGRCFGPKPRECCH 203


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 192  SLYSTVSRSLIRAS*STPRLREEPASGQRCYRSGEGKEQIPERHRELR 335
            S + TVS     A+   P+  E P  GQ+  R    K     +H ELR
Sbjct: 903  SCHKTVSNRWHHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELR 950


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 570 YVAIAQAVLPLYKNKNKTCN 511
           Y+ + QAVLPL KN N  CN
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN 554


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 349 KHTETCEKNPLPTKDVIEQEKS 414
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -1

Query: 242 CASAGSNQTSRYRRIKTSGSSQWRRLQ---QTEAQSFHWCRRHGD 117
           C      +  R  R++     Q R+     QT +Q+ HW + HGD
Sbjct: 192 CEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGD 236


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 1    IKNILIHNGLLRERHSLPER 60
            ++N L HNGLL   HS  E+
Sbjct: 1230 VENTLGHNGLLDAEHSKSEQ 1249


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 363 RFRVLQLSGIEVLDAVQEFVLFLLRFDS 280
           R ++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = +3

Query: 162 LKTSPLRRPRSLYSTVSRSLIRAS*STPRLREEPASGQRCYRSGEGKEQIPER 320
           L  S   R RSL  +VSRS  R S S  R  +  +  +        +  +P R
Sbjct: 413 LSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPAR 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,788
Number of Sequences: 2352
Number of extensions: 14183
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)