Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1217X
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 GYYRVTISFVCSFLLF 421
           GY+ V + F C F++F
Sbjct: 77  GYFTVHLLFYCPFIIF 92


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 262 PPWTQGEVSIVSGDGCPPPSYHQNYTNL 179
           P  T G +  ++ D C P + H N T L
Sbjct: 249 PSGTLGYICEINVDDCRPGACHNNGTCL 276


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 109 CKTVNILLGDFVVYT 65
           C+  NI  GD V+YT
Sbjct: 473 CQYCNIAFGDAVLYT 487


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 214 PPPSYHQNYTNL*ILHMFKG 155
           P PS+HQ ++ + I   F G
Sbjct: 25  PQPSFHQTFSFVVIFGQFFG 44


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 114 IKYSPPVLLTSKKAPLNICKIYKFV 188
           +K+S P +    K PL +  +YK +
Sbjct: 38  VKHSKPKMPLLPKTPLPLTLLYKLL 62


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 226 PTQ*RLRPVSTAGAARSTSTPS 291
           PT+ +    S A A RS +TP+
Sbjct: 201 PTKVKASKASPAAAPRSVATPT 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,319
Number of Sequences: 336
Number of extensions: 2689
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)