Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1217X
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   3.2  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       24   3.2  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   7.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.5  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 199 GNLGADNRHPTQ*RLRPVSTAGAARSTSTPSPD 297
           G +G D  HP +        A +  S+S+P P+
Sbjct: 115 GEIGLDRSHPNRSTTASSEQACSGSSSSSPEPN 147


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 195 WW*LGGGQPSPDTIETSPCVH 257
           W+  G G+ +PD I T  C H
Sbjct: 3   WYRKGYGKYTPDHIRTDLCTH 23


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 241 VSIVS-GDGCPPPSYHQNYTNL 179
           V IVS G+GC  P+Y   YT +
Sbjct: 194 VGIVSWGEGCARPNYPGVYTRV 215


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 408 RSCYLVRFVSTH 443
           RSC+ VRF++ H
Sbjct: 472 RSCFCVRFIAEH 483


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 408 RSCYLVRFVSTH 443
           RSC+ VRF++ H
Sbjct: 472 RSCFCVRFIAEH 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,750
Number of Sequences: 2352
Number of extensions: 10272
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)