Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1215
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   7.3  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   7.3  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   7.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 144  FIVLGFYSFVITL*F*AVSEIA 209
            F+ +GFYS +++L    +SE A
Sbjct: 2997 FLTVGFYSLIVSLRMSLISESA 3018


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 143 IYCSWVLFVCNYIIILSSFRDSKCLNKPALLVHRGLSSEI 262
           ++CSW+L  C  +  L     S      +L  +R  SS++
Sbjct: 217 MFCSWLLLACEQLQHLKGIMRSLMELSASLDTYRPNSSQL 256


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 143 IYCSWVLFVCNYIIILSSFRDSKCLNKPALLVHRGLSSEI 262
           ++CSW+L  C  +  L     S      +L  +R  SS++
Sbjct: 70  MFCSWLLLACEQLQHLKGIMRSLMELSASLDTYRPNSSQL 109


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 143 IYCSWVLFVCNYIIILSSFRDSKCLNKPALLVHRGLSSEI 262
           ++CSW+L  C  +  L     S      +L  +R  SS++
Sbjct: 217 MFCSWLLLACEQLQHLKGIMRSLMELSASLDTYRPNSSQL 256


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 295 RFFLLIDTIESAKYFMKINLTLCFVILGFHLFVI 396
           R + L  TI   KY   ++LTLC     F  F++
Sbjct: 37  REYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLV 70


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 295 RFFLLIDTIESAKYFMKINLTLCFVILGFHLFVI 396
           R + L  TI   KY   ++LTLC     F  F++
Sbjct: 37  REYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLV 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,904
Number of Sequences: 2352
Number of extensions: 8818
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)