Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1214
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 25 0.79
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 23 1.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 3.2
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 5.5
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 22 5.5
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 22 5.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.5
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 21 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 24.6 bits (51), Expect = 0.79
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 268 TALSNGAATPTGDTDGLLSPGCHGG 194
+A +TPT T GLLSP +GG
Sbjct: 179 SATPQAGSTPTYQTQGLLSPS-YGG 202
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 159 YPHGGDGYNVVRTPAFLYSREIRRTVRALPTW 64
YP G+ ++++RTP L+ E R ++ P +
Sbjct: 39 YPIIGNLFDIMRTPEQLFLAERERGLKYYPIY 70
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 408 LRYLKAPLVDREDPK*RIWGDVDCFTLCPQDRECSYRRP 292
LRY K P + P +G L P D C+ RP
Sbjct: 427 LRYAKGPYQPSQAPPTYDYGIPQGVVLNPLDARCNEIRP 465
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 109 VFTRNTQDGSRSPDVEFNFSLGRAVQDHV 23
++TRN D S+ EF SL +DH+
Sbjct: 285 IWTRNADDISQEEYGEFYKSLTNDWEDHL 313
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 407 KHRSSFSSNPSLARRAR 457
KH++ S NP RR R
Sbjct: 76 KHKADISGNPRALRRLR 92
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 407 KHRSSFSSNPSLARRAR 457
KH++ S NP RR R
Sbjct: 76 KHKADISGNPRALRRLR 92
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 222 PSVSPVGVAAP 254
P++SPVGVA P
Sbjct: 116 PTLSPVGVALP 126
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 159 YPHGGDGYNVVRTPAFLYSREIRRTVRALPTW 64
YP G+ ++++RTP ++ + R ++ P +
Sbjct: 39 YPIIGNLFDIMRTPEQMFLADRERGLKYYPIY 70
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 177 SRSSDGYPHGGDGYN 133
S +SD Y H +G+N
Sbjct: 857 SAASDAYTHAPEGFN 871
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 177 SRSSDGYPHGGDGYN 133
S +SD Y H +G+N
Sbjct: 857 SAASDAYTHAPEGFN 871
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 177 SRSSDGYPHGGDGYN 133
S +SD Y H +G+N
Sbjct: 857 SAASDAYTHAPEGFN 871
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 177 SRSSDGYPHGGDGYN 133
S +SD Y H +G+N
Sbjct: 857 SAASDAYTHAPEGFN 871
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,925
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -