Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1213
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 452 LYFKWNFIYILHSRFV 499
           +YF W+F +++  RF+
Sbjct: 320 IYFYWSFGFLIIQRFI 335


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 14  RQQEQWHKHKTNKNKPYYNIVNTHAYRV*EIP 109
           R  ++W +    K +PY ++ N+ A    E+P
Sbjct: 466 RDFQEWKEKCDIKGQPYCSLPNSCALTTRELP 497


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 14  RQQEQWHKHKTNKNKPYYNIVNTHAYRV*EIP 109
           R  ++W +    K +PY ++ N+ A    E+P
Sbjct: 473 RDFQEWKEKCDIKGQPYCSLPNSCALTTRELP 504


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 543 FASYIRKYRV*QNSVTNRECSMYIKFHL 460
           + SY++     Q   T++ C++ I FHL
Sbjct: 23  YPSYLQTVGKCQRLKTDKNCTIVIIFHL 50


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 619 LMLPNDVSLHIEFLYKF 669
           L++PNDVS+  E  Y++
Sbjct: 194 LLMPNDVSITDEPAYQY 210


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 395 LIQFMYTSFMYHIFY*T 445
           L+ +  T F YH FY T
Sbjct: 439 LVTYELTLFQYHAFYLT 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,683
Number of Sequences: 336
Number of extensions: 4029
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)