Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1208
         (725 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1; ...    36   0.77 
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    33   5.4  

>UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 4662

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -3

Query: 636 NFNFKIYKCT*YYMLINNPSKKTIKIYEK--YLKQQCCIFT*IKLIYSINKYI*VPTTQK 463
           NF  K+Y+   YY   +N +KK I IYE   Y     C+F   +L  +I K       +K
Sbjct: 6   NFVNKLYR---YYRKNDNYNKKRIFIYENTVYYTPDDCVFC-TQLNCTIKKRWDKKKKKK 61

Query: 462 TQSTTIHKY*KNYSYFNSELN 400
            +S    +Y K+Y YF +E N
Sbjct: 62  LKSAEKEEYFKDYKYFETENN 82


>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 438 IYVWLYSVSFVSWALKYIYLY-YRLVLFK*KCNTVVLSIFHIFLLFFWMDY 587
           IY+++Y   F  + +  I+LY YR  +FK K   + +  F I ++FF+  Y
Sbjct: 350 IYLFIYYFIFNDFIIINIFLYLYRYYIFKYKLLHIYIFNFIIIIIFFYFSY 400


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,005,463
Number of Sequences: 1657284
Number of extensions: 5632130
Number of successful extensions: 11654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11649
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)