Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1204X
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro...    28   6.8  
AJ277189-1|CAB85484.1|  567|Drosophila melanogaster mod(mdg4)62....    28   6.8  
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P...    28   6.8  
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P...    28   6.8  
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P...    28   6.8  
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P...    28   6.8  
AE014297-2998|AAO41585.1|  567|Drosophila melanogaster CG32491-P...    28   6.8  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   9.1  

>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p
           protein.
          Length = 1001

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 211 PNGLNSCVISFLYHSLGNAK*NTWSLGXSGSGPARFMNGES 89
           PNGL +  +    H++G    N+WS   +G+G +    G S
Sbjct: 748 PNGLANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSS 788


>AJ277189-1|CAB85484.1|  567|Drosophila melanogaster mod(mdg4)62.3
           protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 226 NSSMIRQRSCVRRREQATSVSKALANIPR*PSHRITS 336
           +  ++R++  VRR     +++K +A  PR P H+ T+
Sbjct: 473 HEEIVRRKKRVRRVPPVETIAKVVATTPRHPQHQQTT 509


>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
           isoform E protein.
          Length = 1001

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 211 PNGLNSCVISFLYHSLGNAK*NTWSLGXSGSGPARFMNGES 89
           PNGL +  +    H++G    N+WS   +G+G +    G S
Sbjct: 748 PNGLANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSS 788


>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
           isoform C protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 211 PNGLNSCVISFLYHSLGNAK*NTWSLGXSGSGPARFMNGES 89
           PNGL +  +    H++G    N+WS   +G+G +    G S
Sbjct: 748 PNGLANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSS 788


>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
           isoform B protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 211 PNGLNSCVISFLYHSLGNAK*NTWSLGXSGSGPARFMNGES 89
           PNGL +  +    H++G    N+WS   +G+G +    G S
Sbjct: 748 PNGLANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSS 788


>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
           isoform A protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 211 PNGLNSCVISFLYHSLGNAK*NTWSLGXSGSGPARFMNGES 89
           PNGL +  +    H++G    N+WS   +G+G +    G S
Sbjct: 748 PNGLANMSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSS 788


>AE014297-2998|AAO41585.1|  567|Drosophila melanogaster CG32491-PV,
           isoform V protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 226 NSSMIRQRSCVRRREQATSVSKALANIPR*PSHRITS 336
           +  ++R++  VRR     +++K +A  PR P H+ T+
Sbjct: 473 HEEIVRRKKRVRRVPPVETIAKVVATTPRHPQHQQTT 509


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 294  TREHSKITLTSYYKYKKINDTPSSKITTKTAEAENNDCNKTYAILHYIISGNFN 455
            TR HS+ T  S    + +  T   + +T ++ +  N+C+ +Y   HY  S  FN
Sbjct: 6480 TRPHSEKTTEST---RDVPTTRPFEASTPSSASSGNNCSISYFRNHYKCSNRFN 6530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,965,790
Number of Sequences: 53049
Number of extensions: 434531
Number of successful extensions: 1239
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)