Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1204X
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    26   0.17 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   6.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   6.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   6.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   6.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   6.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 397 FSASAVFVVILLLGVSLIFLYL*YDVRVILE 305
           FSAS+VF+ +L+  + L F+Y     R +LE
Sbjct: 9   FSASSVFLSLLIPALILYFIYFRISRRHLLE 39


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 330 YKYKKINDTPSSKITTKTAEAENNDCNKTYAIL 428
           Y  K  + T  S       + + N+C+ TYA +
Sbjct: 159 YPLKSSDQTSDSFFVDLVIDVDPNNCDNTYAYI 191


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 198 FSPFGPITVQFIDDTSA 248
           F+PFGP+T +  +D+++
Sbjct: 296 FTPFGPVTEKVNNDSNS 312


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 198 FSPFGPITVQFIDDTSA 248
           F+PFGP+T +  +D+++
Sbjct: 296 FTPFGPVTEKVNNDSNS 312


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 396 NNDCNKTYAILHYI 437
           NN+C K Y  ++YI
Sbjct: 101 NNNCKKLYYNINYI 114


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 396 NNDCNKTYAILHYI 437
           NN+C K Y  ++YI
Sbjct: 106 NNNCKKLYYNINYI 119


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 396 NNDCNKTYAILHYI 437
           NN+C K Y  ++YI
Sbjct: 106 NNNCKKLYYNINYI 119


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 396 NNDCNKTYAILHYI 437
           NN+C K Y  ++YI
Sbjct: 106 NNNCKKLYYNINYI 119


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 396 NNDCNKTYAILHYI 437
           NN+C K Y  ++YI
Sbjct: 106 NNNCKKLYYNINYI 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,085
Number of Sequences: 438
Number of extensions: 3094
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)