Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1200
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   6.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.6  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   8.6  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = -3

Query: 655 GTGAELLKILEACHRFPSYFSALLTHDNTL*FQPNAYPNHQKLLQLDKECIKYIFFFYG* 476
           G G  L     A   F  +F    T   TL F  +    H K  +  ++C++     +G 
Sbjct: 283 GAGESLTFEEIAAQAFVFFFGGFETSTTTLTFALHLLAQHPKAQRKARKCVRSTLAKHGN 342

Query: 475 QLPLGHRKLRHSSLQCINSIFIHQTL 398
           ++     K  +  L+C+    IH+TL
Sbjct: 343 EMTYEAIKDMY-YLECV----IHETL 363


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 574 YHVLRGLKNMKESGDMPPI 630
           +HV  GLK +KE   M P+
Sbjct: 590 FHVDSGLKTLKEEEPMTPL 608


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 574 YHVLRGLKNMKESGDMPPI 630
           +HV  GLK +KE   M P+
Sbjct: 591 FHVDSGLKTLKEEEPMTPL 609


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +2

Query: 128 TNSNNLKMSYYTISKIFRTRNGNTEVASIDGIPADNVAFIHKN 256
           TN+     SY+T S +    +G+     +DG+      + H N
Sbjct: 5   TNNCESMTSYFTNSYMNSDMHGHYPGTGVDGLDTSQQMYSHHN 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,398
Number of Sequences: 2352
Number of extensions: 15133
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)