Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1193X
(492 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-... 118 5e-26
UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4; ... 115 7e-25
UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular org... 104 1e-21
UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4; Endopterygot... 103 2e-21
UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular orga... 103 2e-21
UniRef50_P67809 Cluster: Nuclease sensitive element-binding prot... 103 3e-21
UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box fact... 102 5e-21
UniRef50_O46173 Cluster: Y-box protein; n=5; cellular organisms|... 102 5e-21
UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular o... 102 5e-21
UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21; Tetrapod... 101 1e-20
UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhanc... 99 3e-20
UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius auratus... 100 4e-20
UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias... 96 4e-19
UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona intesti... 92 7e-18
UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;... 90 3e-17
UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n... 81 1e-14
UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: ... 81 1e-14
UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box prot... 81 2e-14
UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n... 78 1e-13
UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box ... 76 5e-13
UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep: MG... 75 9e-13
UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1; ... 69 6e-11
UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia japo... 66 4e-10
UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis el... 57 2e-07
UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triti... 57 2e-07
UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ ce... 56 6e-07
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 54 2e-06
UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n... 52 7e-06
UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n... 52 9e-06
UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus laev... 52 9e-06
UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154; Ba... 51 1e-05
UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12; Bacteria... 51 2e-05
UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2; ... 50 2e-05
UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep: AG... 50 3e-05
UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=... 50 3e-05
UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus lu... 50 3e-05
UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain ... 50 4e-05
UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59; Alphapro... 50 4e-05
UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2; Bacteroi... 49 5e-05
UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein; ... 49 5e-05
UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1; ... 49 5e-05
UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7; Bact... 49 5e-05
UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5; Deinoc... 49 7e-05
UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;... 48 9e-05
UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28; Bac... 48 9e-05
UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78; B... 48 1e-04
UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein; ... 48 1e-04
UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n... 48 1e-04
UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39; Gammapro... 48 1e-04
UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter ... 48 2e-04
UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6; c... 47 2e-04
UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:... 47 2e-04
UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38; Gam... 47 2e-04
UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3; ... 47 3e-04
UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain ... 47 3e-04
UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep... 47 3e-04
UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1; ma... 46 3e-04
UniRef50_Q8D046 Cluster: Cold shock protein; n=14; Enterobacteri... 46 5e-04
UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep: GA1... 46 5e-04
UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila melanog... 46 5e-04
UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular... 46 5e-04
UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367; ro... 46 5e-04
UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA - Myxoco... 46 6e-04
UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3; Gammaproteobac... 46 6e-04
UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2; Bacteria... 46 6e-04
UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep: ... 46 6e-04
UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;... 45 8e-04
UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 - Brad... 45 8e-04
UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein; ... 45 8e-04
UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;... 45 0.001
UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2; M... 45 0.001
UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein; ... 45 0.001
UniRef50_P72188 Cluster: Cold shock protein capA; n=23; Proteoba... 45 0.001
UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:... 44 0.001
UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona intesti... 44 0.001
UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4; Brucella|... 44 0.002
UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp. M... 44 0.002
UniRef50_O65639 Cluster: Glycine-rich protein; n=8; Magnoliophyt... 44 0.002
UniRef50_P39158 Cluster: Cold shock protein cspC; n=41; Bacteria... 44 0.002
UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26; cel... 44 0.002
UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29; Bac... 44 0.002
UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10; Bac... 44 0.002
UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24... 44 0.002
UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.002
UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.002
UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1; Marinomon... 44 0.002
UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7; Flavobacterial... 44 0.002
UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas mobi... 43 0.003
UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB... 43 0.003
UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2; Thei... 43 0.003
UniRef50_Q8G880 Cluster: Cold shock protein; n=3; Bifidobacteriu... 43 0.004
UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular organ... 43 0.004
UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.004
UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB... 43 0.004
UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator Cs... 42 0.006
UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44; Bacteria... 42 0.006
UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:... 42 0.006
UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2; C... 42 0.006
UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein; ... 42 0.006
UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like protei... 42 0.006
UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12; Gammapro... 42 0.007
UniRef50_A2TNS0 Cluster: Cold shock protein; n=4; Bacteroidetes|... 42 0.007
UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain, putati... 42 0.010
UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3; Plas... 42 0.010
UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12; Bac... 42 0.010
UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium ... 41 0.013
UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9; Chlo... 41 0.013
UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7; ... 41 0.013
UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:... 41 0.013
UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1; C... 41 0.013
UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter ... 41 0.017
UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein; ... 41 0.017
UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein; ... 41 0.017
UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein; ... 41 0.017
UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1; Ostre... 40 0.023
UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2; Rick... 40 0.023
UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep... 40 0.030
UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38; A... 40 0.030
UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6; Gammaproteobac... 40 0.030
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 40 0.030
UniRef50_Q0C0S6 Cluster: Cold shock DNA-binding protein; n=1; Hy... 40 0.030
UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain ... 40 0.030
UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1; ... 40 0.030
UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula b... 40 0.030
UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12; Gam... 40 0.030
UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;... 40 0.040
UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1; ... 40 0.040
UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein; ... 40 0.040
UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain ... 40 0.040
UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288; Ba... 40 0.040
UniRef50_A4EHC3 Cluster: Cold shock protein; n=1; Roseobacter sp... 39 0.053
UniRef50_Q7NNC3 Cluster: Gsr0488 protein; n=1; Gloeobacter viola... 39 0.070
UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding precurs... 39 0.070
UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein; ... 39 0.070
UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein; ... 39 0.070
UniRef50_A7PXK7 Cluster: Chromosome chr12 scaffold_36, whole gen... 39 0.070
UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2; Flexibac... 38 0.092
UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome s... 38 0.12
UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6; ... 38 0.12
UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein; ... 38 0.12
UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1; ... 38 0.12
UniRef50_UPI000150A0B6 Cluster: hypothetical protein TTHERM_0034... 38 0.16
UniRef50_UPI0000589074 Cluster: PREDICTED: similar to ENSANGP000... 38 0.16
UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep... 38 0.16
UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1; C... 38 0.16
UniRef50_A0YBV1 Cluster: CspA-like protein; n=17; Proteobacteria... 38 0.16
UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31; Bac... 38 0.16
UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein; ... 37 0.21
UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep: ... 37 0.21
UniRef50_Q4SL04 Cluster: Chromosome 17 SCAF14563, whole genome s... 36 0.37
UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6; Prot... 36 0.37
UniRef50_Q6F7A1 Cluster: Putative cold shock protein; n=2; Acine... 36 0.37
UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.37
UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10; Streptococc... 36 0.37
UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.37
UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2; Proteobac... 36 0.37
UniRef50_UPI000065F08C Cluster: Homolog of Oncorhynchus mykiss "... 36 0.49
UniRef50_A3X5Q6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.49
UniRef50_A2U2L8 Cluster: Cold shock protein; n=3; Bacteroidetes|... 36 0.49
UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like pr... 36 0.49
UniRef50_Q6ZQW4 Cluster: CDNA FLJ46848 fis, clone UTERU3005422; ... 36 0.49
UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7; Halobacteriace... 36 0.49
UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein; ... 36 0.65
UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease ... 36 0.65
UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep... 36 0.65
UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.65
UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.65
UniRef50_A2XZD2 Cluster: Putative uncharacterized protein; n=2; ... 36 0.65
UniRef50_UPI0000F2EB18 Cluster: PREDICTED: hypothetical protein;... 35 0.86
UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1; D... 35 0.86
UniRef50_A5EWK7 Cluster: Cold-shock DNA-binding domain protein; ... 35 0.86
UniRef50_A0BFX7 Cluster: Chromosome undetermined scaffold_105, w... 35 0.86
UniRef50_UPI00004D77F7 Cluster: nephronectin; n=5; Tetrapoda|Rep... 35 1.1
UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocar... 35 1.1
UniRef50_O33052 Cluster: Small cold-shock protein; n=7; Coryneba... 35 1.1
UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8; Bacteroidetes|... 35 1.1
UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein; ... 35 1.1
UniRef50_A0X3F5 Cluster: Cold-shock DNA-binding domain protein; ... 35 1.1
UniRef50_UPI0000383847 Cluster: hypothetical protein Magn0300622... 34 1.5
UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7; Pr... 34 1.5
UniRef50_Q4AG52 Cluster: Cold-shock protein, DNA-binding; n=3; B... 34 1.5
UniRef50_Q5K7N8 Cluster: Putative uncharacterized protein; n=2; ... 34 1.5
UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6; Streptoc... 34 1.5
UniRef50_UPI000047036E Cluster: Type-1 angiotensin II receptor-a... 34 2.0
UniRef50_Q69107 Cluster: LAT protein; n=1; Human herpesvirus 2|R... 34 2.0
UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2; Saliniba... 34 2.0
UniRef50_Q0TYV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 34 2.0
UniRef50_P0A985 Cluster: Cold shock-like protein cspH; n=24; Ent... 34 2.0
UniRef50_UPI00015B563D Cluster: PREDICTED: similar to myotubular... 33 2.6
UniRef50_UPI00015B4CAB Cluster: PREDICTED: hypothetical protein;... 33 2.6
UniRef50_UPI00015616C2 Cluster: PREDICTED: similar to ral guanin... 33 2.6
UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1; R... 33 2.6
UniRef50_Q2JH08 Cluster: Putative uncharacterized protein; n=3; ... 33 2.6
UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2; Rhodococcu... 33 2.6
UniRef50_A7CVB9 Cluster: AMP-dependent synthetase and ligase; n=... 33 2.6
UniRef50_A3WZM6 Cluster: Cold shock DNA binding protein; n=1; Ni... 33 2.6
UniRef50_A7R6B6 Cluster: Chromosome undetermined scaffold_1222, ... 33 2.6
UniRef50_A2XZG9 Cluster: Putative uncharacterized protein; n=2; ... 33 2.6
UniRef50_Q0KHU0 Cluster: CG2174-PB, isoform B; n=3; Drosophila m... 33 2.6
UniRef50_A0CIJ2 Cluster: Chromosome undetermined scaffold_19, wh... 33 2.6
UniRef50_Q2U6I0 Cluster: Predicted protein; n=1; Aspergillus ory... 33 2.6
UniRef50_Q82RP9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia sola... 33 3.5
UniRef50_Q69JB2 Cluster: Hydroxyproline-rich glycoprotein DZ-HRG... 33 3.5
UniRef50_UPI00006CB6F6 Cluster: ''''Cold-shock'''' DNA-binding d... 33 4.6
UniRef50_UPI000065E7A2 Cluster: Splicing factor, arginine/serine... 33 4.6
UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2; Acti... 33 4.6
UniRef50_Q89RC3 Cluster: Bll2849 protein; n=1; Bradyrhizobium ja... 33 4.6
UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1... 33 4.6
UniRef50_Q84IJ3 Cluster: Cold shock protein; n=1; Janthinobacter... 33 4.6
UniRef50_Q3W8S0 Cluster: Cellulose-binding, bacterial type precu... 33 4.6
UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein; ... 33 4.6
UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc me... 33 4.6
UniRef50_A6T6Y7 Cluster: Cell division protein; n=2; Enterobacte... 33 4.6
UniRef50_A4X7H2 Cluster: Anthranilate synthase component I and c... 33 4.6
UniRef50_A1G720 Cluster: Tetratricopeptide TPR_2; n=2; Salinispo... 33 4.6
UniRef50_Q9SUX2 Cluster: Extensin-like protein; n=2; Arabidopsis... 33 4.6
UniRef50_Q4P6X3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_UPI0000F2CB06 Cluster: PREDICTED: hypothetical protein;... 32 6.0
UniRef50_UPI0000DD7E8C Cluster: PREDICTED: hypothetical protein;... 32 6.0
UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease s... 32 6.0
UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,... 32 6.0
UniRef50_Q63708 Cluster: Transcription factor EF1; n=1; Rattus s... 32 6.0
UniRef50_Q5PBP1 Cluster: Cold shock protein; n=7; Anaplasmatacea... 32 6.0
UniRef50_Q48AJ7 Cluster: Cold-shock DNA-binding domain family pr... 32 6.0
UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma proteoba... 32 6.0
UniRef50_A7CPS0 Cluster: Mu-like prophage protein gp29-like prot... 32 6.0
UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein; ... 32 6.0
UniRef50_A1UMV6 Cluster: Putative uncharacterized protein; n=4; ... 32 6.0
UniRef50_Q0DJF4 Cluster: Os05g0293200 protein; n=6; Oryza sativa... 32 6.0
UniRef50_Q00UK9 Cluster: Chromosome 16 contig 1, DNA sequence; n... 32 6.0
UniRef50_Q9XYC6 Cluster: Axon-associated SH3 binding-like protei... 32 6.0
UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:... 32 6.0
UniRef50_Q6YI85 Cluster: Runt protein; n=4; Branchiostoma|Rep: R... 32 6.0
UniRef50_Q60R78 Cluster: Putative uncharacterized protein CBG214... 32 6.0
UniRef50_Q7S322 Cluster: Predicted protein; n=1; Neurospora cras... 32 6.0
UniRef50_Q6FTP1 Cluster: Similar to sp|P37370 Saccharomyces cere... 32 6.0
UniRef50_A4UCN1 Cluster: Predicted protein; n=1; Magnaporthe gri... 32 6.0
UniRef50_P34445 Cluster: Uncharacterized protein F54C8.7; n=3; C... 32 6.0
UniRef50_Q8IN94 Cluster: Trithorax group protein osa; n=9; Eukar... 32 6.0
UniRef50_UPI00015B471C Cluster: PREDICTED: similar to teashirt-l... 32 8.0
UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins; n=... 32 8.0
UniRef50_UPI000069EE3D Cluster: UPI000069EE3D related cluster; n... 32 8.0
UniRef50_UPI0000EB1318 Cluster: UPI0000EB1318 related cluster; n... 32 8.0
UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n... 32 8.0
UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19; Euteleost... 32 8.0
UniRef50_Q98J75 Cluster: Probable transcriptional repressor; n=1... 32 8.0
UniRef50_Q3VXR1 Cluster: Putative uncharacterized protein precur... 32 8.0
UniRef50_A7BYF1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_A1SNP5 Cluster: Cold-shock protein, DNA-binding; n=26; ... 32 8.0
UniRef50_Q6VBA4 Cluster: Heat shock factor RHSF13; n=2; Oryza sa... 32 8.0
UniRef50_Q41805 Cluster: Extensin-like protein precursor; n=15; ... 32 8.0
UniRef50_Q019N2 Cluster: Chromosome 05 contig 1, DNA sequence; n... 32 8.0
UniRef50_A5BAX2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_A2WST1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_A7LPD3 Cluster: Putative uncharacterized protein; n=4; ... 32 8.0
UniRef50_Q6CW84 Cluster: Similarities with sgd|S0004329 Saccharo... 32 8.0
UniRef50_Q2H0W1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q0U0X5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_A6SBI4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q9UMN6 Cluster: WW domain-binding protein 7; n=16; Euka... 32 8.0
>UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box
protein - Bombyx mori (Silk moth)
Length = 272
Score = 118 bits (285), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVG+GEA
Sbjct: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
Query: 269 LPGRK 283
+ G K
Sbjct: 93 VAGEK 97
Score = 95.1 bits (226), Expect = 8e-19
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF
Sbjct: 89 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
>UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Lonomia obliqua (Moth)
Length = 254
Score = 115 bits (276), Expect = 7e-25
Identities = 54/65 (83%), Positives = 56/65 (86%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI RNNPRKAVRSVG+GE
Sbjct: 24 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEVVEFAV 83
Query: 269 LPGRK 283
+ G K
Sbjct: 84 VAGEK 88
Score = 88.2 bits (209), Expect = 9e-17
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EFAVVAGEKG EAAGVTGPGGEPVKGSPYAADKRRGY+RQY+
Sbjct: 80 EFAVVAGEKGCEAAGVTGPGGEPVKGSPYAADKRRGYYRQYY 121
>UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular
organisms|Rep: Y-box factor homolog - Aplysia
californica (California sea hare)
Length = 253
Score = 104 bits (249), Expect = 1e-21
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
+IA +VSGTVKWFNVKSGYGFINR+DTKEDVFVHQTAI +NNPRK +RSVG+GE
Sbjct: 28 IIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDV 87
Query: 269 LPGRK 283
+ G K
Sbjct: 88 VEGEK 92
Score = 52.0 bits (119), Expect = 7e-06
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 360
EF VV GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 84 EFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRRR 118
>UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4;
Endopterygota|Rep: Y-box protein Ct-p50 - Chironomus
tentans (Midge)
Length = 317
Score = 103 bits (247), Expect = 2e-21
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
+IA KV+GTVKWFNVKSGYGFINRND K+D+FVHQ+AI +NNP+KAVRSVG+GE
Sbjct: 25 IIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVHQSAIIKNNPKKAVRSVGDGEVVEFDV 84
Query: 269 LPGRK 283
+ G K
Sbjct: 85 VAGEK 89
Score = 68.5 bits (160), Expect = 8e-11
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 363
EF VVAGEKG EAA VTGP GEPVKGSPYAADKRRG
Sbjct: 81 EFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRG 116
>UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular
organisms|Rep: ENSANGP00000031633 - Anopheles gambiae
str. PEST
Length = 166
Score = 103 bits (247), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIA KV+G VKWFNVKSGYGFINR DT+EDVFVHQ+AIARNNP+KAVRSVG+GE
Sbjct: 5 VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDV 64
Query: 269 LPGRK 283
+ G K
Sbjct: 65 VIGEK 69
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGY 366
EF VV GEKG EAA VTGP GEPVKGS YAA+KRRG+
Sbjct: 61 EFDVVIGEKGNEAANVTGPQGEPVKGSQYAAEKRRGF 97
>UniRef50_P67809 Cluster: Nuclease sensitive element-binding protein
1; n=65; Coelomata|Rep: Nuclease sensitive
element-binding protein 1 - Homo sapiens (Human)
Length = 324
Score = 103 bits (246), Expect = 3e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVG+GE
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 269 LPGRK 283
+ G K
Sbjct: 114 VEGEK 118
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 378
EF VV GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 110 EFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box factor;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Y-Box factor - Strongylocentrotus purpuratus
Length = 326
Score = 102 bits (244), Expect = 5e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+A KVSGTVKWFNVK+GYGFINR+DTKEDVFVHQ+AI RNNPRK RSVG+GE
Sbjct: 19 VLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRNNPRKYQRSVGDGEVVEFDV 78
Query: 269 LPGRK 283
+ G K
Sbjct: 79 VEGTK 83
Score = 52.0 bits (119), Expect = 7e-06
Identities = 26/35 (74%), Positives = 26/35 (74%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 360
EF VV G KG EAA VTGP G PV GS YAADKRR
Sbjct: 75 EFDVVEGTKGNEAARVTGPEGAPVVGSKYAADKRR 109
>UniRef50_O46173 Cluster: Y-box protein; n=5; cellular
organisms|Rep: Y-box protein - Drosophila melanogaster
(Fruit fly)
Length = 359
Score = 102 bits (244), Expect = 5e-21
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AIA NNP+KAVRSVG+GE
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDV 116
Query: 269 LPGRK 283
+ G K
Sbjct: 117 VIGEK 121
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGY 366
EF VV GEKG EAA VTGP GEPV+GS +AADKRR +
Sbjct: 113 EFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular
organisms|Rep: DNA-binding protein A - Homo sapiens
(Human)
Length = 372
Score = 102 bits (244), Expect = 5e-21
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVG+GE
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 269 LPGRK 283
+ G K
Sbjct: 146 VEGEK 150
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EF VV GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 142 EFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21;
Tetrapoda|Rep: Y-box-binding protein 2 - Homo sapiens
(Human)
Length = 364
Score = 101 bits (241), Expect = 1e-20
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVG+GE
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 269 LPGRK 283
+ G K
Sbjct: 149 VEGEK 153
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 360
EF VV GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 145 EFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
>UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhancer
factor II; n=1; Gallus gallus|Rep: Rous sarcoma virus
transcription enhancer factor II - Gallus gallus
(Chicken)
Length = 298
Score = 99 bits (238), Expect = 3e-20
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK + SVG+GE
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDV 142
Query: 269 LPGRK 283
+ G K
Sbjct: 143 VEGEK 147
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EF VV GEKG EAA VTGP G PV+GS YAAD+RR Y R YF
Sbjct: 139 EFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYF 179
>UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius
auratus|Rep: Y box protein 2 - Carassius auratus
(Goldfish)
Length = 297
Score = 99.5 bits (237), Expect = 4e-20
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
VIA V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVG+GE
Sbjct: 16 VIATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGE 69
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 378
EF VV KG EAA VTGPGG PVKGS YA +KRR R Y
Sbjct: 72 EFDVVEAAKGSEAANVTGPGGIPVKGSRYAPNKRRFRRRFY 112
>UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias
latipes|Rep: Cold-shock domain protein - Oryzias latipes
(Medaka fish) (Japanese ricefish)
Length = 366
Score = 95.9 bits (228), Expect = 4e-19
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVG+GE
Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGE 51
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EF V+ KG EAA VTGPGG PVKGS YA +KRR + R++F
Sbjct: 54 EFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNKRR-FRRRFF 94
>UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona
intestinalis|Rep: Y-box protein 1/2/3 - Ciona
intestinalis (Transparent sea squirt)
Length = 320
Score = 91.9 bits (218), Expect = 7e-18
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+A SG VKWFNV++GYGF+NR+D KEDVF+HQTAI +NNP+K +RSVG+GE
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDV 80
Query: 269 LPGRK 283
+ G K
Sbjct: 81 VEGEK 85
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/42 (71%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +1
Query: 256 EFAVVAGEKGF-EAAGVTGPGGEPVKGSPYAADKRRGYHRQY 378
EF VV GEKG EAA VTGP GEPVKGS YAAD+RR Y +Y
Sbjct: 77 EFDVVEGEKGLPEAANVTGPNGEPVKGSKYAADRRR-YKPRY 117
>UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-1 - Caenorhabditis elegans
Length = 208
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V A KV GTVKWFNVK+GYGFINR DT ED+FVHQTAI NNP K +RS+G+ E
Sbjct: 16 VKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDI 75
Query: 269 LPGRK 283
+ G K
Sbjct: 76 VEGSK 80
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 259 FAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 354
F +V G KG EAA VTGP G PV+GS YAAD+
Sbjct: 73 FDIVEGSKGLEAASVTGPDGGPVQGSKYAADR 104
>UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B82 UniRef100 entry -
Rattus norvegicus
Length = 147
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSL 262
VIA KV G V WFNV++GY FINRNDTKED FVHQT I +NNP K + SVG+GE L
Sbjct: 91 VIAMKVLGIVTWFNVRNGYVFINRNDTKEDTFVHQTVIKKNNP-KYLHSVGDGETVEL 147
>UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: DNA
binding protein - Canis familiaris (Dog)
Length = 96
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +2
Query: 128 NVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
NV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVG+GE + G K
Sbjct: 1 NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEK 52
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
+F VV GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 44 QFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 84
>UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box protein
Ct-p40; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Y-box protein Ct-p40 - Nasonia vitripennis
Length = 335
Score = 80.6 bits (190), Expect = 2e-14
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
+IA KV+GTVKWFNVKSGYGFINR+ D+FV Q I+ N P KAVRSVG+GE
Sbjct: 64 IIANKVTGTVKWFNVKSGYGFINRSVFHFDIFVCQRCISNNLPSKAVRSVGDGEVVEFDV 123
Query: 269 LPGRK 283
+ G K
Sbjct: 124 VIGEK 128
Score = 69.7 bits (163), Expect = 3e-11
Identities = 34/42 (80%), Positives = 35/42 (83%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
EF VV GEKG EAA VTGP GE VKGSPYAADKRRGY RQY+
Sbjct: 120 EFDVVIGEKGNEAANVTGPDGEAVKGSPYAADKRRGY-RQYY 160
>UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B3F UniRef100 entry -
Rattus norvegicus
Length = 292
Score = 77.8 bits (183), Expect = 1e-13
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
VIA KV GT+K V +G G INRNDTKEDVFVHQTA+ +N+PRK +RSVG+ E +
Sbjct: 26 VIATKVLGTMKCSIVWNGCGLINRNDTKEDVFVHQTAMKKNDPRKYLRSVGDAETVEFDF 85
Query: 269 LPGRK 283
+ G K
Sbjct: 86 VEGEK 90
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHR 372
EF V GEK EAA VTG GG PV+ S Y AD+ H+
Sbjct: 82 EFDFVEGEKDVEAASVTGLGGVPVQDSKYTADRNHCKHQ 120
>UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box
protein - Dugesia japonica (Planarian)
Length = 266
Score = 75.8 bits (178), Expect = 5e-13
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
++G VKWFNVK GYGF+ RND +ED+F+HQ+AI ++NP +SVGEGE
Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGE 77
Score = 34.3 bits (75), Expect = 1.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +1
Query: 259 FAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHR 372
F +V G KG EAA V+ G+ VKGS YA RG R
Sbjct: 81 FDIVKGAKGNEAANVSAIDGKCVKGSEYALRYPRGRGR 118
>UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep:
MGC115344 protein - Xenopus laevis (African clawed frog)
Length = 221
Score = 74.9 bits (176), Expect = 9e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQ A A N
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQGAEAAN 71
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1
Query: 280 KGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 381
+G EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 65 QGAEAANVTGPKGAPVQGSRYAADRRR-YRRGYY 97
>UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 68.9 bits (161), Expect = 6e-11
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+++++GTVKWFN K G+GFI R+DT ED+FVH++ I + N +S+G+GE
Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGE 82
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 277 EKGFEAAGVTGPGGEPVKGSPYAADKRRGYHR 372
E G A+ VTGPG +PVKGSP+ A +RG HR
Sbjct: 85 EFGLIASKVTGPGFKPVKGSPFVA--KRGGHR 114
>UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia
japonica|Rep: Y-Box factor protein - Dugesia japonica
(Planarian)
Length = 178
Score = 66.1 bits (154), Expect = 4e-10
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G VKW+NVK GYGFI+R+D EDVFVHQ+AI+R P K +S+GE E
Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGEDE 50
Score = 36.3 bits (80), Expect = 0.37
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1
Query: 259 FAVVAGEKGFEAAGVTGPGGEPVKGSPYA 345
F VV G KG EA VTGP G+ V GS +A
Sbjct: 54 FDVVKGSKGNEAMNVTGPNGDAVLGSKFA 82
>UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis
elegans|Rep: Y-box protein 2 - Caenorhabditis elegans
Length = 267
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK-AVRSVGEGE 250
I + G VKW++V YGFI+RND ++D+FVHQTAIA++ K +R++G+ E
Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDE 115
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 259 FAVVAGEKGFEAAGVTGPGGEPVKGSPY 342
F +V G+ G EAA VTGP G+ V GS Y
Sbjct: 119 FDLVEGKNGPEAANVTGPNGDNVIGSRY 146
>UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triticum
aestivum|Rep: Cold shock domain protein 3 - Triticum
aestivum (Wheat)
Length = 231
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEA 253
+ E+V GTVKWFNV G+GFI+ +D ED+FVHQ+AI + RS+ E +A
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSD----GYRSLNENDA 50
>UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ
cell-specific Y-box-binding protein) (Contrin) (MSY2
homolog).; n=1; Xenopus tropicalis|Rep: Y-box-binding
protein 2 (Germ cell-specific Y-box-binding protein)
(Contrin) (MSY2 homolog). - Xenopus tropicalis
Length = 199
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 378
EF VV GEKG EAA VTGPGG PVKGS +A ++RR R Y
Sbjct: 91 EFDVVEGEKGAEAANVTGPGGVPVKGSRFAPNRRRFRRRFY 131
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
V W+ + G ++ + + TAI RNNPRK +RSVG+GE + G K
Sbjct: 45 VPWYPMGRGV-HLHGGGARASLIGWDTAIKRNNPRKFLRSVGDGETVEFDVVEGEK 99
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+G+VKWFN+ G+GFI R+D EDVFVHQ+AI + RS+ EGE
Sbjct: 484 TGSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKAS----GYRSLEEGE 527
>UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC181B UniRef100 entry -
Rattus norvegicus
Length = 210
Score = 52.0 bits (119), Expect = 7e-06
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +2
Query: 128 NVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
++++ YG++ +N + DVFVHQTAI +NNPRK + + G+ E + G K
Sbjct: 37 SLRNIYGYVGKNSSGNDVFVHQTAIKKNNPRKYLHTTGDRETVEFDVIEGEK 88
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 348
EF V+ GEK EAA + GPGG V+GS YAA
Sbjct: 80 EFDVIEGEKDAEAANIIGPGG--VQGSQYAA 108
>UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n=1;
unknown|Rep: UPI00015BD510 UniRef100 entry - unknown
Length = 86
Score = 51.6 bits (118), Expect = 9e-06
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
++GTVKWF+ + GYGF+ R+D + DVFVH +AI N R+ +++ +G+
Sbjct: 18 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPN--RQGFKTLVQGQ 64
>UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus
laevis|Rep: LOC100036881 protein - Xenopus laevis
(African clawed frog)
Length = 131
Score = 51.6 bits (118), Expect = 9e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
K++GT KWFN + GYGF+ +D D+FVHQ+ I + RS+ EGE
Sbjct: 3 KLTGTCKWFNAEKGYGFLTPDDGSPDIFVHQSTIHAD----GFRSLAEGE 48
>UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154;
Bacteria|Rep: Cold shock-like protein cspG - Shigella
flexneri
Length = 70
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
++ K++G VKWFN G+GFI +D +DVFVH TAI N R
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR 43
>UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12;
Bacteria|Rep: Cold shock protein CspA - Pseudomonas
stutzeri (strain A1501)
Length = 136
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPW 268
V+AE+ +GTVKWFN GYGFI R + DVFVH AI + RS+ EG+
Sbjct: 67 VMAERETGTVKWFNDAKGYGFIQRGN-GADVFVHYRAIRGDGH----RSLAEGQQVEFSV 121
Query: 269 LPGRK 283
+ G+K
Sbjct: 122 IQGQK 126
>UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 238
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
+E+V GTVKWF+ G+GFI +D ED+FVHQ+++ + R
Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYR 44
>UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep:
AGR_C_161p - Agrobacterium tumefaciens (strain C58 /
ATCC 33970)
Length = 163
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+GTVKWFN GYGFI +D +DVFVH +A+ R
Sbjct: 97 TGTVKWFNATKGYGFIQPDDGSQDVFVHISAVER 130
>UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=1;
uncultured bacterium BAC17H8|Rep: Predicted cold shock
family protein - uncultured bacterium BAC17H8
Length = 83
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN + GYGFIN ++ DVFVH TA+
Sbjct: 18 GTVKWFNTQKGYGFINPDEDGNDVFVHITAV 48
>UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 106
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+A + G VKWFN G+GFI +D E++FVHQT I+ RSV EGE
Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGIS----CAGFRSVWEGE 49
>UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain
protein precursor; n=1; Methylobacterium sp. 4-46|Rep:
Putative cold-shock DNA-binding domain protein precursor
- Methylobacterium sp. 4-46
Length = 242
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGR 280
++SGTVKW++ G+GF++ D +DVFVH++A+A R + S+ EG+ ++ + G+
Sbjct: 175 EMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALA----RAGLDSLAEGQQVTMGVVEGQ 230
Query: 281 K 283
K
Sbjct: 231 K 231
Score = 37.9 bits (84), Expect = 0.12
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 113 TVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
TVKWFN + G+GF+ D D F+H A+
Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAV 94
>UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59;
Alphaproteobacteria|Rep: Cold shock protein cspA -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 69
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
SGTVKWFN G+GFI +D DVFVH +A+ R R V
Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLV 43
>UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2;
Bacteroidetes/Chlorobi group|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 110
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRS 235
+ TVKWF+ K GYGFI+ D EDVFVH + I ++ K ++S
Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKS 45
>UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 70
Score = 49.2 bits (112), Expect = 5e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
+GTVKWFNV+ G+GFI +D D FVH +A+ R++ R
Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDR 40
>UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 189
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+++ +GTVKWF+ + G+GFI +D ED+FVHQT+I + R++ EGE
Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSD----GFRTLSEGE 51
>UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7;
Bacteria|Rep: Cold shock-like protein cspJ - Salmonella
typhimurium
Length = 70
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
K++G VKWFN + G+GFI D +DVFVH +AI N R
Sbjct: 4 KITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFR 43
>UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5;
Deinococci|Rep: Cold shock protein homolog - Thermus
thermophilus
Length = 73
Score = 48.8 bits (111), Expect = 7e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGR 280
G VKWFN + GYGFI R + DVFVH TAI K R++ EG+ + PGR
Sbjct: 4 GRVKWFNAEKGYGFIER-EGDTDVFVHYTAI----NAKGFRTLNEGDIVTFDVEPGR 55
>UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-4 - Caenorhabditis elegans
Length = 294
Score = 48.4 bits (110), Expect = 9e-05
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRN---DTKEDVFVHQTAIARNNPRK 223
VI V G VKWF+V+ YGF+ R+ D ED FVHQTAI +++ K
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIK 131
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 259 FAVVAGEKGFEAAGVTGPGGEPVKGSPYA 345
F +V G KG EAA VTGP GE V+GS +A
Sbjct: 145 FDIVEGLKGPEAANVTGPDGENVRGSRFA 173
>UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28;
Bacteria|Rep: Cold shock-like protein cspE - Shigella
flexneri
Length = 69
Score = 48.4 bits (110), Expect = 9e-05
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
K+ G VKWFN G+GFI D +DVFVH +AI N
Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN 39
>UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78;
Bacteria|Rep: Cold shock DNA binding protein -
Rhodopseudomonas palustris
Length = 84
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
GTVKWFN GYGFI +D DVFVH +A+ R
Sbjct: 18 GTVKWFNATKGYGFIQPDDGGNDVFVHISAVER 50
>UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein;
n=30; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 249
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
E+ SGTVK+FN G+GFI R+D + D FVH +A+ R
Sbjct: 179 ERTSGTVKFFNTTKGFGFIARDDGQADAFVHISAVQR 215
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVK+FN G+GF+ R+D EDVFVH +A+
Sbjct: 86 GTVKFFNPSKGFGFVARDDGGEDVFVHISAV 116
>UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n=2;
cellular organisms|Rep: Cold shock NA binding domain
protein - Aspergillus clavatus
Length = 125
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPG 277
E+ +GTVKWFN + GYGFI +T ED+FVH A+ N +S+ EG+ + + G
Sbjct: 58 ERQNGTVKWFNDEKGYGFIT-PETGEDLFVHFRAVEGN----GFKSLKEGQKVTFEAVQG 112
Query: 278 RK 283
+K
Sbjct: 113 QK 114
>UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39;
Gammaproteobacteria|Rep: Cold shock protein cspA -
Salmonella typhimurium
Length = 70
Score = 48.0 bits (109), Expect = 1e-04
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGR 280
K++G VKWFN G+GFI +D +DVFVH +AI + +S+ EG+ S G
Sbjct: 4 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQND----GYKSLDEGQKVSFTIESGA 59
Query: 281 K 283
K
Sbjct: 60 K 60
>UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter
bethesdensis CGDNIH1|Rep: Cold shock protein -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 100
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
GTVKWFN GYGFI + ++DVFVH +A+ R +RS+ EG+
Sbjct: 35 GTVKWFNPTKGYGFIAPSTGEKDVFVHISAV----QRAGLRSLNEGQ 77
>UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6;
cellular organisms|Rep: Cold-shock protein, DNA-binding
- Enterococcus faecium DO
Length = 35
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+GTVKWFN + G+GFI+R D DVFVH +AI R
Sbjct: 3 NGTVKWFNAEKGFGFISRED-GSDVFVHFSAIPR 35
>UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:
Cold shock protein - Oceanobacter sp. RED65
Length = 171
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
G VKWFNVK G+GFI R D EDVFVH +I RS+ EG+ + G+K
Sbjct: 108 GLVKWFNVKKGFGFITR-DNGEDVFVHFRSIRGTGH----RSLSEGQNVKFSVVDGQK 160
>UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38;
Gammaproteobacteria|Rep: Cold shock-like protein cspC -
Shigella flexneri
Length = 69
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
K+ G VKWFN G+GFI D +DVFVH +AI N ++++ EG+
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN----GLKTLAEGQ 48
>UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3;
Bacteria|Rep: Cold-shock domain family protein -
Neptuniibacter caesariensis
Length = 149
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
++ GTVKWFNV G+GFI R + +DVFVH RN + RS+ EG+
Sbjct: 81 DREQGTVKWFNVSKGFGFITRGE-DDDVFVH----FRNIRGRGHRSLAEGQ 126
>UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain
protein; n=3; Methylobacterium extorquens PA1|Rep:
Putative cold-shock DNA-binding domain protein -
Methylobacterium extorquens PA1
Length = 69
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+GTVKWFN GYGFI ++ +DVFVH +A+ R +R + EG+
Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAV----ERAGLRDLAEGQ 46
>UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep:
Protein lin-28 - Caenorhabditis elegans
Length = 227
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G+ KWFNV GYGF+ + T ED+FVHQ+ N + RS+ EGE
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQS----NLNMQGFRSLDEGE 97
>UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Cold-shock
DNA-binding protein - marine gamma proteobacterium
HTCC2143
Length = 144
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVR 232
GTVKWFNV GYGF+ R + E++FVH +I+ N RK +R
Sbjct: 79 GTVKWFNVSKGYGFVTR-ASGEEIFVHFRSIS-GNGRKVLR 117
>UniRef50_Q8D046 Cluster: Cold shock protein; n=14;
Enterobacteriaceae|Rep: Cold shock protein - Yersinia
pestis
Length = 77
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G VKWFN GYGFI+ +D DV+V++TAIA N K S+ EG+
Sbjct: 14 GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIA-NTKNK---SLNEGQ 56
>UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep:
GA14466-PA - Drosophila pseudoobscura (Fruit fly)
Length = 168
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G KWFNV G+GF+ ND ++VFVHQ+ I + RS+GE E
Sbjct: 23 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIKMS----GFRSLGEQE 65
>UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila
melanogaster|Rep: Lin-28 homolog - Drosophila
melanogaster (Fruit fly)
Length = 195
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G KWFNV G+GF+ ND ++VFVHQ+ I + RS+GE E
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMS----GFRSLGEQE 83
>UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular
organisms|Rep: Glycine-rich protein 2b - Arabidopsis
thaliana (Mouse-ear cress)
Length = 201
Score = 46.0 bits (104), Expect = 5e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
++ GTVKWF+ + G+GFI +D +D+FVHQ++I
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSI 47
>UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367;
root|Rep: Cold shock-like protein cspB - Yersinia
enterocolitica
Length = 70
Score = 46.0 bits (104), Expect = 5e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNN 214
++ K++G VKWF+ G+GFI+ D +DVFVH +AI N+
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND 41
>UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA -
Myxococcus xanthus
Length = 68
Score = 45.6 bits (103), Expect = 6e-04
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+GTVKWFN G+GFI ++D DVF H TAI + R++ EG+
Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTD----GFRTLAEGQ 46
>UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3;
Gammaproteobacteria|Rep: Cold shock protein - Vibrio
angustum S14
Length = 68
Score = 45.6 bits (103), Expect = 6e-04
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
K++GTVKWFN G+GFI+ D K DVFVH +AI R
Sbjct: 3 KLTGTVKWFNDDKGFGFISGTDGK-DVFVHFSAIQAQGRR 41
>UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2;
Bacteria|Rep: Conserved domain protein - Stigmatella
aurantiaca DW4/3-1
Length = 100
Score = 45.6 bits (103), Expect = 6e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVKWFN G+GFI ++ EDVF H TAI
Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAI 67
>UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep:
Cold shock protein - Arthrobacter globiformis
Length = 67
Score = 45.6 bits (103), Expect = 6e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN + G+GFI +D+ DVFVH + I
Sbjct: 4 GTVKWFNAEKGFGFITPDDSDGDVFVHYSEI 34
>UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 502
Score = 45.2 bits (102), Expect = 8e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINR 160
V+A +V GTVKWFNV++GYGFINR
Sbjct: 56 VLATQVLGTVKWFNVRNGYGFINR 79
>UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 -
Bradyrhizobium japonicum
Length = 120
Score = 45.2 bits (102), Expect = 8e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
GTVKWFN GYGF+ +D +DVFVH +A+ +
Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEK 88
>UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein;
n=13; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Frankia sp. (strain CcI3)
Length = 67
Score = 45.2 bits (102), Expect = 8e-04
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
GTVKWFN + G+GFI+ + DVFVH ++I + +S+ EG++ + G+K
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHYSSIVAD----GYKSLDEGQSVQFEIVQGQK 57
>UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;
cellular organisms|Rep: Cold shock domain family protein
- Geobacter sulfurreducens
Length = 66
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/58 (44%), Positives = 34/58 (58%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
G VKWFN G+GFI + D EDVFVH +AI ++ +S+ EGE S + G K
Sbjct: 4 GRVKWFNDAKGFGFIEQ-DNGEDVFVHFSAIQQD----GFKSLAEGEQVSFDVVNGPK 56
>UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2;
Marinomonas|Rep: Cold-shock protein, DNA-binding -
Marinomonas sp. MED121
Length = 79
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+ +K+ GTVKWFN G GFI R D + DVFVH +I
Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSI 36
>UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein;
n=1; Ostreococcus tauri|Rep: Putative nucleic acid
binding protein - Ostreococcus tauri
Length = 125
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK 223
G VKWFN G+G+I +D + DVFVHQ+A+ R+
Sbjct: 13 GKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRR 50
>UniRef50_P72188 Cluster: Cold shock protein capA; n=23;
Proteobacteria|Rep: Cold shock protein capA -
Pseudomonas fragi
Length = 64
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWL 271
++++ SGTVKWFN + G+GFI +D+FVH AI + +S+ EG+ S
Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESD----GFKSLKEGQTVSFVAE 56
Query: 272 PGRK 283
G+K
Sbjct: 57 KGQK 60
>UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:
Cold shock protein - Rhodococcus sp. (strain RHA1)
Length = 119
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
+GTV+WFN + G+GF+ D +D+FVH + IA + R
Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHR 92
>UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Ruminococcus obeum ATCC 29174
Length = 66
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEA 253
GTVKWFN + GYGFI D DVFVH +AI N + +S+ EG+A
Sbjct: 4 GTVKWFNAEKGYGFITGED-GADVFVHFSAI--NG--EGFKSLDEGQA 46
>UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 193
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFI---NRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGR 280
G KWFN K GYGFI + K DVFVHQ++I + RS+ EG+ + P +
Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSI----DMEGFRSLQEGDRVKFWYKPSK 84
Query: 281 K 283
K
Sbjct: 85 K 85
>UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4;
Brucella|Rep: COLD SHOCK PROTEIN CSPA - Brucella
melitensis
Length = 101
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+GTVKWFN G+GFI + DVFVH +A+ R
Sbjct: 35 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQR 68
>UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp.
MED297|Rep: Cold shock protein - Reinekea sp. MED297
Length = 153
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
++ G VKWFNV G+GF+ R D EDVFVH +I
Sbjct: 84 DREEGLVKWFNVSKGFGFVTR-DNGEDVFVHFRSI 117
>UniRef50_O65639 Cluster: Glycine-rich protein; n=8;
Magnoliophyta|Rep: Glycine-rich protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 299
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
A + +G V WFN GYGFI +D ++FVHQ++I R
Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYR 49
>UniRef50_P39158 Cluster: Cold shock protein cspC; n=41;
Bacteria|Rep: Cold shock protein cspC - Bacillus
subtilis
Length = 66
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN + G+GFI R + +DVFVH +AI
Sbjct: 4 GTVKWFNAEKGFGFIER-ENGDDVFVHFSAI 33
>UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26;
cellular organisms|Rep: Cold shock-like protein cspC -
Bacillus anthracis
Length = 65
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+ G VKWFN + G+GFI R D +DVFVH +AI ++
Sbjct: 1 MQGRVKWFNAEKGFGFIERED-GDDVFVHFSAIQQD 35
>UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29;
Bacteria|Rep: Cold shock-like protein cspA - Stigmatella
aurantiaca
Length = 68
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVKWFN G+GFI ++ EDVF H +AI
Sbjct: 3 TGTVKWFNDAKGFGFITQDGGGEDVFCHHSAI 34
>UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10;
Bacteria|Rep: Cold shock-like protein cspA - Shewanella
violacea
Length = 70
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIA 205
+++ +GTVKWFN G+GF+ +++ DVFVH AIA
Sbjct: 1 MSDSNTGTVKWFNEDKGFGFLTQDNGGADVFVHFRAIA 38
>UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24;
Bacteria|Rep: Temperature acclimation protein B -
Xylella fastidiosa
Length = 85
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
GTVKWFN G+GFI N+ D+FVH AI N +S+ EG+ S + G+K
Sbjct: 23 GTVKWFNDNKGFGFITSNN-GPDLFVHYRAIQGN----GFKSLQEGQKVSFVAVQGQK 75
>UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein;
n=11; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Mesorhizobium sp. (strain BNC1)
Length = 69
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
GTVK+FN G+GFI +D DVFVH +A+ R R V
Sbjct: 4 GTVKFFNATKGFGFIQPDDGAADVFVHISAVERAGMRTIV 43
>UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein;
n=19; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Roseovarius sp. TM1035
Length = 68
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+GTVKWFN G+GFI ++ +DVFVH +A+ R
Sbjct: 3 NGTVKWFNSTKGFGFIAPDNGGKDVFVHISAVER 36
>UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1; Marinomonas
sp. MED121|Rep: Cold-shock protein CspD - Marinomonas
sp. MED121
Length = 92
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
GTVKWFN GYGFI +ED+F+H ++I + +++ G++ S PG++
Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILID----GYKTLKAGQSVSFKTSPGKQ 57
>UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7;
Flavobacteriales|Rep: Cold shock protein - Flavobacteria
bacterium BAL38
Length = 66
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
+G VK+FN GYGFI ++T +D+FVH + + V S+ EG+A S GRK
Sbjct: 3 TGKVKFFNESKGYGFITDDETGKDIFVHASGM-------RVESLNEGDAVSYEEEEGRK 54
>UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas
mobilis|Rep: Cold shock protein - Zymomonas mobilis
Length = 174
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 113 TVKWFNVKSGYGFINRNDTKEDVFVHQTA 199
TVKWFN GYGF+ RN ++D+FVH A
Sbjct: 108 TVKWFNRTKGYGFLIRNADQQDIFVHAEA 136
Score = 32.3 bits (70), Expect = 6.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
++G VKWF++ G+GF+ + + D+ +H
Sbjct: 13 ITGYVKWFDIIKGFGFLIGSKGEGDILIH 41
>UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein;
n=9; Bacteria|Rep: Cold-shock DNA-binding domain protein
- Frankia sp. (strain CcI3)
Length = 67
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN + G+GFI+ + DVFVH +AI
Sbjct: 4 GTVKWFNSEKGFGFISVDGGGSDVFVHYSAI 34
>UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB -
Myxococcus xanthus
Length = 66
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN G+GFI D EDVF H TAI
Sbjct: 4 GTVKWFNDAKGFGFI-AQDNGEDVFCHHTAI 33
>UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein;
n=5; cellular organisms|Rep: Cold-shock DNA-binding
domain protein - Psychrobacter cryohalolentis (strain
K5)
Length = 71
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR------KAVRSVGEGEA 253
++ + G VKWFN G+GFI R D+ ED+FVH AI + R K SV EG+
Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQR-DSGEDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59
Query: 254 G 256
G
Sbjct: 60 G 60
>UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2;
Theileria|Rep: Cold shock protein, putative - Theileria
annulata
Length = 95
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+++G KWFN K GYGFI + EDVFVHQ+ I
Sbjct: 3 RLNGVCKWFNNKKGYGFITL-ENGEDVFVHQSEI 35
>UniRef50_Q8G880 Cluster: Cold shock protein; n=3;
Bifidobacterium|Rep: Cold shock protein -
Bifidobacterium longum
Length = 79
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
GTVK+F K G+GFI +D EDVFVH I + + + EG+
Sbjct: 4 GTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGD 50
>UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular
organisms|Rep: Cold shock protein - Bradyrhizobium
japonicum
Length = 67
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
GTVKWFN GYGFI +DVFVH +A+ +
Sbjct: 5 GTVKWFNPTKGYGFIQPASGGKDVFVHISAVQK 37
>UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein;
n=11; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 68
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+GTVKWFN G+GFI +DVFVH +A+ R+
Sbjct: 3 NGTVKWFNSTKGFGFIAPETGGKDVFVHISAVERS 37
>UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB
fold; n=2; Cryptosporidium|Rep: Cold shock RNA binding
domain of the OB fold - Cryptosporidium parvum Iowa II
Length = 135
Score = 42.7 bits (96), Expect = 0.004
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+SG KWF+ G+GFI +D ED+FVHQ I
Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNI 43
>UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator CspA;
n=21; Bacteria|Rep: Cold shock transcriptional regulator
CspA - Vibrio parahaemolyticus
Length = 70
Score = 42.3 bits (95), Expect = 0.006
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWL 271
++ K +G+VKWFN G+GFI+ + ED+FVH +I +++ EG+ S
Sbjct: 1 MSNKSTGSVKWFNETKGFGFISPENGGEDLFVHFQSIVST----GFKTLSEGQKVSYVVE 56
Query: 272 PGRK 283
G+K
Sbjct: 57 QGKK 60
>UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44;
Bacteria|Rep: Cold shock-like protein - Acinetobacter
sp. (strain ADP1)
Length = 69
Score = 42.3 bits (95), Expect = 0.006
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWL 271
++ V+GTVKWFN G+GFI + D+ DVF H IA + +++ EG+ S +
Sbjct: 1 MSNSVNGTVKWFNEVKGFGFI-QQDSGPDVFAHFKEIASS----GFKTLYEGQRVSFGIV 55
Query: 272 PGRK 283
G+K
Sbjct: 56 DGQK 59
>UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:
Cold shock protein - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 84
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
G +KWFN + GYGFI D+FVH + + R+ R
Sbjct: 4 GNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIR 40
>UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2;
Clostridium|Rep: Cold-shock protein, DNA-binding -
Clostridium phytofermentans ISDg
Length = 70
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEA 253
+GTVKW++ + GYGF++ ND + DVF+H + I K V EGE+
Sbjct: 5 TGTVKWYDSERGYGFVSTNDGR-DVFLHHSQIKEKGFDKEVH---EGES 49
>UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein;
n=3; Magnetospirillum|Rep: Cold shock DNA-binding domain
protein - Magnetospirillum gryphiswaldense
Length = 209
Score = 42.3 bits (95), Expect = 0.006
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
V V+ TVKWFN G+GF+ +D D F+H +A+ R
Sbjct: 47 VTQTNVTATVKWFNASKGFGFVAPSDGTPDAFLHISALER 86
Score = 39.9 bits (89), Expect = 0.030
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+E V G VK+F+ + G+GF+ + +DVFVH A+ R+
Sbjct: 141 SETVEGVVKFFSAEKGFGFVQTDQGGKDVFVHIKALERS 179
>UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like protein;
n=3; Oryza sativa|Rep: Cold shock domain protein 2-like
protein - Oryza sativa subsp. japonica (Rice)
Length = 221
Score = 42.3 bits (95), Expect = 0.006
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+++E+V G VK F+ +G+ FI +D ED+F+HQ+++
Sbjct: 1 MVSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSL 38
>UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12;
Gammaproteobacteria|Rep: Cold-shock protein CspD -
Pseudomonas aeruginosa
Length = 90
Score = 41.9 bits (94), Expect = 0.007
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+SG VKWFN GYGFI ED+F H +AI
Sbjct: 2 LSGKVKWFNNAKGYGFILAEGRDEDLFAHYSAI 34
>UniRef50_A2TNS0 Cluster: Cold shock protein; n=4;
Bacteroidetes|Rep: Cold shock protein - Dokdonia
donghaensis MED134
Length = 82
Score = 41.9 bits (94), Expect = 0.007
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIA---RNNPRKAVRSVGEGEAG 256
G VK+FN K G+GFI +++ E+VFVH T + R N K V +GE G
Sbjct: 21 GKVKFFNTKKGFGFIAIDNSDEEVFVHTTNVTGRLREND-KVTFEVEDGEKG 71
>UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain, putative;
n=1; Salinibacter ruber DSM 13855|Rep: 'Cold-shock'
DNA-binding domain, putative - Salinibacter ruber
(strain DSM 13855)
Length = 69
Score = 41.5 bits (93), Expect = 0.010
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVKWF+ GYGF+ ++ ++DVF+H + +
Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEV 34
>UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3;
Plasmodium|Rep: Cold-shock protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 150
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+K++G V F+ + GYGFI ND D+FVH T I ++
Sbjct: 28 DKITGNVIMFDKRKGYGFIKPNDGGPDIFVHYTDICQS 65
>UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12;
Bacteria|Rep: Cold shock-like protein cspA - Rickettsia
prowazekii
Length = 70
Score = 41.5 bits (93), Expect = 0.010
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+A + G VKW+N +GFI +++ +DVFVH++AI
Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAI 37
>UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium
loti|Rep: Cold-shock protein - Rhizobium loti
(Mesorhizobium loti)
Length = 97
Score = 41.1 bits (92), Expect = 0.013
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
GTVKW+ + G+GFI ++ ++DVFVH + + R+
Sbjct: 33 GTVKWYKPEKGFGFIAPDNGEKDVFVHASTLTRS 66
>UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9;
Chlorobiaceae|Rep: Cold shock-like protein CspG -
Chlorobium tepidum
Length = 97
Score = 41.1 bits (92), Expect = 0.013
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
VKWF+ K GYGFI D ED+FVH ++I + K + + E
Sbjct: 6 VKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVE 50
>UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7;
cellular organisms|Rep: Cold-shock domain family protein
- Enterococcus faecalis (Streptococcus faecalis)
Length = 67
Score = 41.1 bits (92), Expect = 0.013
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK 223
+GTVK FN K GYGFI D E +FVHQT I RK
Sbjct: 3 TGTVKSFNHKRGYGFIIAEDGSE-IFVHQTGICMPGFRK 40
>UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:
Cold shock protein - Methylococcus capsulatus
Length = 69
Score = 41.1 bits (92), Expect = 0.013
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWL 271
++++ GTVKWFN G+GFI R + D+FVH R+ + +++ EG+ S +
Sbjct: 1 MSQQQQGTVKWFNESKGFGFIQR-ENGSDLFVH----FRSIQGQGFKTLKEGQRVSFTEV 55
Query: 272 PGRK 283
G+K
Sbjct: 56 AGQK 59
>UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1;
Chlorobium ferrooxidans DSM 13031|Rep: Cold-shock
protein, DNA-binding - Chlorobium ferrooxidans DSM 13031
Length = 70
Score = 41.1 bits (92), Expect = 0.013
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
V+G VKWF+V+ G+GFI + ED+FVH
Sbjct: 2 VNGKVKWFDVRKGFGFILNPNGGEDIFVH 30
>UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter
oxydans|Rep: Cold shock protein - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 96
Score = 40.7 bits (91), Expect = 0.017
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+GTVKWFN G+GFI ++ +D FVH + + R
Sbjct: 31 TGTVKWFNSTKGFGFIQPDNGGQDAFVHISELER 64
>UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Nitrobacter hamburgensis X14|Rep: Cold-shock
DNA-binding domain protein - Nitrobacter hamburgensis
(strain X14 / DSM 10229)
Length = 68
Score = 40.7 bits (91), Expect = 0.017
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN----NPRKAVR-SVGEGEAGSL 262
+G+VK+FN + GYGFI +D D+F+H +A PR V VG+G G L
Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLADKLRYPCPRDRVEYEVGKGPDGRL 59
>UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein;
n=1; Sphingopyxis alaskensis|Rep: Cold-shock DNA-binding
domain protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 90
Score = 40.7 bits (91), Expect = 0.017
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVK+FN GYGFI D D FVH TA+
Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAV 56
>UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein;
n=2; Marinomonas|Rep: Cold-shock DNA-binding domain
protein - Marinomonas sp. MED121
Length = 97
Score = 40.7 bits (91), Expect = 0.017
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
VSG VKWFN + G+GFI R + DVFVH AI
Sbjct: 33 VSGIVKWFNDEKGFGFIER-EGGPDVFVHFRAI 64
>UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1;
Ostreococcus tauri|Rep: Glycogen debranching enzyme -
Ostreococcus tauri
Length = 141
Score = 40.3 bits (90), Expect = 0.023
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
V WFN GYG++ +D EDVFVHQ+ +
Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSEL 72
>UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2;
Rickettsia bellii RML369-C|Rep: Cold shock-like protein
cspA - Rickettsia bellii (strain RML369-C)
Length = 70
Score = 40.3 bits (90), Expect = 0.023
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+ G VKWFN +GFI + + +DVFVH++A+
Sbjct: 5 IVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAV 37
>UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep:
Cold shock protein B - Streptomyces coelicolor
Length = 127
Score = 39.9 bits (89), Expect = 0.030
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKWFN + G+GF++R+D DVFVH + +
Sbjct: 3 TGKVKWFNSEKGFGFLSRDD-GGDVFVHSSVL 33
>UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38;
Alphaproteobacteria|Rep: Cold shock DNA binding protein
- Rhodopseudomonas palustris
Length = 235
Score = 39.9 bits (89), Expect = 0.030
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKA 226
++SG +KWF+ GYGF+ ++ DV +H T + R+ + A
Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTA 109
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
VKWFN G+GF+ + D+FVH + R
Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRR 195
>UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6;
Gammaproteobacteria|Rep: Cold shock protein -
Pseudomonas fluorescens
Length = 69
Score = 39.9 bits (89), Expect = 0.030
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
++ + +GTVKWFN + G+GFI +D+FVH
Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVH 33
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 39.9 bits (89), Expect = 0.030
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
++GTV W+N G GFIN + +DVFVH +A+
Sbjct: 2 LTGTVIWYNPVKGLGFINPDQGGDDVFVHMSAL 34
>UniRef50_Q0C0S6 Cluster: Cold shock DNA-binding protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Cold shock
DNA-binding protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 175
Score = 39.9 bits (89), Expect = 0.030
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 113 TVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
T+KWFN GYGF+ R+ + D+FVH A +
Sbjct: 112 TLKWFNRTRGYGFVLRDGQETDIFVHAVAFRK 143
>UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Parvibaculum lavamentivorans DS-1|Rep:
Putative cold-shock DNA-binding domain protein -
Parvibaculum lavamentivorans DS-1
Length = 199
Score = 39.9 bits (89), Expect = 0.030
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
VKWFN GYGF+ R + D+F+H + R
Sbjct: 138 VKWFNRARGYGFVTRGEGTPDIFIHMETLRR 168
Score = 37.5 bits (83), Expect = 0.16
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
++ +++G VKWF+ GYGFI + +DV VH + +
Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCL 70
>UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 75
Score = 39.9 bits (89), Expect = 0.030
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK 223
++E + GTVKWF+ + GYGFI D D F H + I + RK
Sbjct: 1 MSETLQGTVKWFSAQKGYGFITGED-GIDYFAHFSEIQMDGYRK 43
>UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula
bermudensis HTCC2503|Rep: Cold shock protein -
Parvularcula bermudensis HTCC2503
Length = 173
Score = 39.9 bits (89), Expect = 0.030
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 113 TVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
TVKWF+ GYGF+ + ED+FVH +
Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVV 137
Score = 35.5 bits (78), Expect = 0.65
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+ ++ G VKWF+ GYGFI DV +H + + ++
Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQS 49
>UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12;
Gammaproteobacteria|Rep: Cold shock-like protein cspD -
Shigella flexneri
Length = 74
Score = 39.9 bits (89), Expect = 0.030
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR--KAVRSV 238
GTVKWFN G+GFI ED+F H + I + R KA +SV
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSV 48
>UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;
Bacteria|Rep: Cold-shock domain family protein -
Enterococcus faecalis (Streptococcus faecalis)
Length = 66
Score = 39.5 bits (88), Expect = 0.040
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVKWFN G+GFI + DVFVH +AI
Sbjct: 3 TGTVKWFNSDKGFGFITA-ENGNDVFVHFSAI 33
>UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1;
Enterococcus faecalis|Rep: Cold-shock domain family
protein - Enterococcus faecalis (Streptococcus faecalis)
Length = 68
Score = 39.5 bits (88), Expect = 0.040
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
G VKWF+ + GYGFI N+ ++++FVH TAI
Sbjct: 4 GIVKWFDNRKGYGFIVYNE-EDEIFVHFTAI 33
>UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 210
Score = 39.5 bits (88), Expect = 0.040
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
+ TVKWFN G+GF+ +D + D F+H + + R
Sbjct: 6 TATVKWFNATKGFGFVRVSDGEPDAFLHISVLQR 39
>UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Sphingomonas wittichii RW1|Rep: Putative
cold-shock DNA-binding domain protein - Sphingomonas
wittichii RW1
Length = 198
Score = 39.5 bits (88), Expect = 0.040
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
VKWFN GYGF+ R+ +D+F+H + R
Sbjct: 137 VKWFNRLKGYGFLVRDGETQDIFIHMETVRR 167
Score = 39.1 bits (87), Expect = 0.053
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
AE V G VKWF+ G+GFI + + DV VH ++ R++ R+ +
Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVH-FSVLRDHGRRTL 74
>UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288;
Bacteria|Rep: Cold shock-like protein cspA - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 67
Score = 39.5 bits (88), Expect = 0.040
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+G VKWFN + GYGFI +D+F H + I N
Sbjct: 3 TGVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQAN 37
>UniRef50_A4EHC3 Cluster: Cold shock protein; n=1; Roseobacter sp.
CCS2|Rep: Cold shock protein - Roseobacter sp. CCS2
Length = 151
Score = 39.1 bits (87), Expect = 0.053
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 89 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
V+ E++ VKWF+ GYGF+N ED+FV + ++
Sbjct: 80 VLEERIPVRVKWFDPSKGYGFVNAFGCAEDIFVGAATLRKS 120
>UniRef50_Q7NNC3 Cluster: Gsr0488 protein; n=1; Gloeobacter
violaceus|Rep: Gsr0488 protein - Gloeobacter violaceus
Length = 65
Score = 38.7 bits (86), Expect = 0.070
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
V+WF++++GYG I R+DT E+VF+ TAI
Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAI 30
>UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding precursor;
n=2; Bacteroidetes/Chlorobi group|Rep: Cold-shock
protein, DNA-binding precursor - Pelodictyon
phaeoclathratiforme BU-1
Length = 91
Score = 38.7 bits (86), Expect = 0.070
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVH 190
+GTVKWFN G+GFI ++ DVFVH
Sbjct: 26 TGTVKWFNKMKGFGFIIPDNGGADVFVH 53
>UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Cold-shock
DNA-binding domain protein - Geobacter bemidjiensis Bem
Length = 92
Score = 38.7 bits (86), Expect = 0.070
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 98 EKV--SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWL 271
EKV +G VKWFN G+GFI + D DVFVH ++I + +S+ EG++ + +
Sbjct: 24 EKVMANGVVKWFNDAKGFGFIEQ-DNGVDVFVHFSSIQGD----GFKSLVEGDSVTFDVV 78
Query: 272 PGRK 283
G K
Sbjct: 79 QGAK 82
>UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein;
n=8; Bacteroidetes|Rep: Cold-shock DNA-binding domain
protein - Croceibacter atlanticus HTCC2559
Length = 64
Score = 38.7 bits (86), Expect = 0.070
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVK+FN G+GFI T E+ FVH T +
Sbjct: 3 TGTVKFFNDTKGFGFIKEEGTNEEHFVHVTGL 34
>UniRef50_A7PXK7 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 227
Score = 38.7 bits (86), Expect = 0.070
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -2
Query: 350 SAA*GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRP 234
SA+ P T SP PVTP S P SP T S P L P
Sbjct: 121 SASPSSPPTSSPASPVTPPTSSPASPVTAPTSSPPLETP 159
>UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2;
Flexibacteraceae|Rep: Conserved domain protein -
Microscilla marina ATCC 23134
Length = 64
Score = 38.3 bits (85), Expect = 0.092
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVH 190
G VK+F GYGFI +DT ED+F H
Sbjct: 4 GVVKFFKEDKGYGFITNSDTGEDIFFH 30
>UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 206
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARN 211
SG KWFNV+ G+GFI+ D DVFVHQ+ RN
Sbjct: 8 SGFCKWFNVRMGFGFISMTHSEGSPVDPPLDVFVHQSVGGRN 49
>UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6;
Bacteria|Rep: Cold shock domain family protein -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 87
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
+ K+ G VKWFN G+GFI + +D FVH ++I N
Sbjct: 15 MTNKIRGKVKWFNKDKGFGFI--ESSGKDYFVHFSSIQSN 52
>UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Maricaulis maris MCS10|Rep: Cold-shock DNA-binding
domain protein - Maricaulis maris (strain MCS10)
Length = 174
Score = 37.9 bits (84), Expect = 0.12
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
++ G VKW++ GYGFI+ +D + D+ +H + + R
Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRR 50
Score = 36.3 bits (80), Expect = 0.37
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
VKWF+ GYGF+ ++ + DVF+H + R
Sbjct: 110 VKWFDALRGYGFVTCDNVEGDVFLHAATLRR 140
>UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1;
Congregibacter litoralis KT71|Rep: Cold-shock domain
family protein - Congregibacter litoralis KT71
Length = 189
Score = 37.9 bits (84), Expect = 0.12
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVKWFN G+GFI R + +++FVH +I
Sbjct: 126 GTVKWFNGTKGFGFIIR-ENGDEIFVHHRSI 155
>UniRef50_UPI000150A0B6 Cluster: hypothetical protein
TTHERM_00340170; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00340170 - Tetrahymena
thermophila SB210
Length = 864
Score = 37.5 bits (83), Expect = 0.16
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
EK GT+K+F+ YGFI ++++ D+FVH
Sbjct: 617 EKYKGTLKFFDQDKNYGFIVEDESRTDIFVH 647
>UniRef50_UPI0000589074 Cluster: PREDICTED: similar to
ENSANGP00000011455; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000011455
- Strongylocentrotus purpuratus
Length = 234
Score = 37.5 bits (83), Expect = 0.16
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
E G KWF++ YGF+ +D DVFVHQ I
Sbjct: 61 ELYRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVI 95
>UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep:
Cold shock protein - Onion yellows phytoplasma
Length = 74
Score = 37.5 bits (83), Expect = 0.16
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+K GT +WF+ GYGFI D K D+FVH ++I
Sbjct: 4 KKQQGTCRWFSKDKGYGFIVSVDGK-DIFVHYSSI 37
>UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1;
Caulobacter sp. K31|Rep: Cold-shock protein, DNA-binding
- Caulobacter sp. K31
Length = 201
Score = 37.5 bits (83), Expect = 0.16
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIAR 208
VKWFN GYGF+ R+ D+FVH + R
Sbjct: 138 VKWFNRTKGYGFVVRDGQPGDIFVHIETLRR 168
Score = 35.5 bits (78), Expect = 0.65
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKE----DVFVHQTAIARNNPRK 223
++SG VKWF+ GYGFI +D + DV +H T++ RN R+
Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSL-RNCGRE 60
>UniRef50_A0YBV1 Cluster: CspA-like protein; n=17;
Proteobacteria|Rep: CspA-like protein - marine gamma
proteobacterium HTCC2143
Length = 91
Score = 37.5 bits (83), Expect = 0.16
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIA 205
+GTVKWFN G+GFI DVF H + I+
Sbjct: 3 TGTVKWFNNAKGFGFILPEGGGADVFAHYSTIS 35
>UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31;
Bacteria|Rep: Cold shock-like protein cspD - Haemophilus
influenzae
Length = 72
Score = 37.5 bits (83), Expect = 0.16
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
G VKWFN G+GFI+ D+F H + I + R
Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYR 40
>UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein;
n=6; Rhodobacterales|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 181
Score = 37.1 bits (82), Expect = 0.21
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARN 211
V+ VKWF+ G+GF N EDVFVH + R+
Sbjct: 113 VAARVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRS 148
Score = 34.7 bits (76), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
I V+G VKWF+ G+GF+ ++ D+ +H +
Sbjct: 18 ICPTVAGVVKWFDTTKGFGFVLSDEGGPDILLHANVL 54
>UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep:
Lin-28 homolog B - Homo sapiens (Human)
Length = 250
Score = 37.1 bits (82), Expect = 0.21
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ EGE
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGE 81
Score = 31.9 bits (69), Expect = 8.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 256 EFAVVAGEKGFEAAGVTGPGGEPVKGS 336
EF KG E+ VTGPGG P GS
Sbjct: 84 EFTFKKSSKGLESIRVTGPGGSPCLGS 110
>UniRef50_Q4SL04 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 870
Score = 36.3 bits (80), Expect = 0.37
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 335 EPFTGSPPGPVTPAASKP---FSPATTANSPPLLRRPSAQPYVGCYGRWQSDAQTHLPWC 165
EP +PP P TP S P FS +A P +LRR + YV QSD+++ P C
Sbjct: 786 EPPPPAPPLPPTPQLSSPECDFSGGLSATLPSVLRRMNGNSYVLLR---QSDSESASPLC 842
Query: 164 HS 159
+S
Sbjct: 843 YS 844
>UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6;
Proteobacteria|Rep: Cold shock-like protein CspD -
Haemophilus ducreyi
Length = 68
Score = 36.3 bits (80), Expect = 0.37
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
G VKWFN G+GFI + + D+F H + I ++ R
Sbjct: 4 GIVKWFNNVKGFGFITCDTVEGDIFAHFSEIKQDGYR 40
>UniRef50_Q6F7A1 Cluster: Putative cold shock protein; n=2;
Acinetobacter|Rep: Putative cold shock protein -
Acinetobacter sp. (strain ADP1)
Length = 208
Score = 36.3 bits (80), Expect = 0.37
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKED-VFVHQTAIARNNPRKAV 229
V+WF+ K GYGFI ND+++ VF+H AR PR V
Sbjct: 8 VEWFDDK-GYGFIQPNDSQKGRVFLHIRDFARKGPRPIV 45
>UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 68
Score = 36.3 bits (80), Expect = 0.37
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
++GT+ WF+ +GYGFI +D D+ V A+ R+ R
Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLR 40
>UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10;
Streptococcaceae|Rep: Cold shock protein C - Lactococcus
lactis
Length = 66
Score = 36.3 bits (80), Expect = 0.37
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK 223
G + WFN GYGFI +D +DVF + +I N+ +K
Sbjct: 4 GKINWFNADKGYGFIMADD-MQDVFAYLLSIQGNDFKK 40
>UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein;
n=3; Bacteria|Rep: Cold-shock DNA-binding domain protein
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 197
Score = 36.3 bits (80), Expect = 0.37
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+++ G VKWF+ + GYGF+ R ED+FVH + +
Sbjct: 131 SQREQGRVKWFDPEKGYGFLVR-PGGEDLFVHHSEV 165
>UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2;
Proteobacteria|Rep: Cold shock-like protein -
Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 69
Score = 36.3 bits (80), Expect = 0.37
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
G VKWFN G+GF++ + DVF H + I
Sbjct: 4 GIVKWFNNAKGFGFLSVESSDVDVFAHYSVI 34
>UniRef50_UPI000065F08C Cluster: Homolog of Oncorhynchus mykiss
"Collagen a1(I).; n=1; Takifugu rubripes|Rep: Homolog of
Oncorhynchus mykiss "Collagen a1(I). - Takifugu rubripes
Length = 470
Score = 35.9 bits (79), Expect = 0.49
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -2
Query: 335 EPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYGRWQSDAQTHLPWCHS 159
+P T PPGP P S P P T+ PL R S Q GC G+ + +T P C S
Sbjct: 262 DPGTSGPPGPWDPWTSGPQDPGTSGPPGPLNRCSSIQ-VEGCKGQ-PALTRTQRPSCGS 318
>UniRef50_A3X5Q6 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 463
Score = 35.9 bits (79), Expect = 0.49
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPG 277
+ G +K F G+GFI + EDVF H T + ++ R AV + + +A PG
Sbjct: 1 MQGKIKAFIHDKGFGFIEVDGQSEDVFFHITTVKDSSVRCAVGEIVDFDAAESKRKPG 58
>UniRef50_A2U2L8 Cluster: Cold shock protein; n=3;
Bacteroidetes|Rep: Cold shock protein - Polaribacter
dokdonensis MED152
Length = 76
Score = 35.9 bits (79), Expect = 0.49
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVK+FN G+GFI T ++ FVH + +
Sbjct: 17 GTVKFFNESKGFGFITEEGTNKEHFVHVSGL 47
>UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like
protein; n=1; marine gamma proteobacterium HTCC2080|Rep:
Cold shock protein, CspA family-like protein - marine
gamma proteobacterium HTCC2080
Length = 138
Score = 35.9 bits (79), Expect = 0.49
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGE 250
G +KWFN G+GFI +D E VFVH RN RS+ +G+
Sbjct: 76 GNIKWFNATKGFGFIVGDDGAE-VFVHY----RNVEGLTKRSIKQGQ 117
>UniRef50_Q6ZQW4 Cluster: CDNA FLJ46848 fis, clone UTERU3005422;
n=1; Homo sapiens|Rep: CDNA FLJ46848 fis, clone
UTERU3005422 - Homo sapiens (Human)
Length = 303
Score = 35.9 bits (79), Expect = 0.49
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 323 GSPPGPVTP-AASKPFSPATTANSPPLLRRPSAQP--YVGCYGRWQSDAQTHLPW 168
G PP P TP AA F P + +P + + P+AQP G YG+W S A W
Sbjct: 158 GVPPPPATPGAAPLAFPPPPSQAAPGMSKPPTAQPDFPYGQYGKW-SPAMPRPRW 211
>UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7;
Halobacteriaceae|Rep: Cold shock protein - Halobacterium
salinarium (Halobacterium halobium)
Length = 74
Score = 35.9 bits (79), Expect = 0.49
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVH 190
+G V +FN GYGFI D EDVF H
Sbjct: 13 TGEVDFFNDTGGYGFIETEDADEDVFFH 40
>UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 1152
Score = 35.5 bits (78), Expect = 0.65
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
EK G +K+F+ + +GF N ++ + DVFVH
Sbjct: 878 EKKKGRLKFFDTSNNFGFFNLDEDQSDVFVH 908
>UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease
with a cold-shock DNA-binding domain; n=2;
Psychrobacter|Rep: Possible guanine-specific
ribonuclease with a cold-shock DNA-binding domain -
Psychrobacter arcticum
Length = 247
Score = 35.5 bits (78), Expect = 0.65
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNP 217
SG +K +N GYGFI+ ++ EDVF H ++ P
Sbjct: 3 SGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVQMAQP 39
>UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep:
Ysb - Agrobacterium tumefaciens
Length = 100
Score = 35.5 bits (78), Expect = 0.65
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKWF+ +GFI +D DVF+H ++I
Sbjct: 3 TGKVKWFDATKRFGFITPDDGGPDVFLHLSSI 34
>UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein;
n=13; Actinomycetales|Rep: Cold-shock DNA-binding domain
protein - Mycobacterium sp. (strain MCS)
Length = 147
Score = 35.5 bits (78), Expect = 0.65
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKW++ + G+GF+++ D EDV+V +A+
Sbjct: 14 TGRVKWYDAEKGFGFLSQED-GEDVYVRSSAL 44
>UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Cold-shock
DNA-binding domain protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 69
Score = 35.5 bits (78), Expect = 0.65
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
G VKWF+ + G+GFI ++ E+V VH T I + +A+ E E ++ GR+
Sbjct: 4 GRVKWFSGEKGFGFI-ETESGEEVLVHYTEI-KGEGFRALEEGAEVEYAAVKTEDGRR 59
>UniRef50_A2XZD2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 601
Score = 35.5 bits (78), Expect = 0.65
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 320 SPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
SPP P + AA P P TT +PP P+A P
Sbjct: 91 SPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAP 123
>UniRef50_UPI0000F2EB18 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 271
Score = 35.1 bits (77), Expect = 0.86
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQ 225
PF G+PP P+ K +P A +P LR P AQ
Sbjct: 29 PFQGAPPLKTAPSLKKAAAPPRAATAPKALRMPKAQ 64
>UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1;
Desulfotalea psychrophila|Rep: Hypothetical cold-shock
protein - Desulfotalea psychrophila
Length = 204
Score = 35.1 bits (77), Expect = 0.86
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSV 238
GT+K +N + GYGFI ++ DVF+H A + R + V
Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRPEIGQV 46
>UniRef50_A5EWK7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Dichelobacter nodosus VCS1703A|Rep: Cold-shock
DNA-binding domain protein - Dichelobacter nodosus
(strain VCS1703A)
Length = 210
Score = 35.1 bits (77), Expect = 0.86
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
E +GTV ++N G+GFI+ N+ + +VF H + A N R
Sbjct: 9 EICTGTVVYWNDDKGFGFIDTNEKQANVFFHISHFAYENRR 49
>UniRef50_A0BFX7 Cluster: Chromosome undetermined scaffold_105,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_105,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 383
Score = 35.1 bits (77), Expect = 0.86
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQ 193
E+V G +K++N YGF + K+D+FVHQ
Sbjct: 299 ERVIGYLKFYNESKQYGFFLDDKNKKDIFVHQ 330
>UniRef50_UPI00004D77F7 Cluster: nephronectin; n=5; Tetrapoda|Rep:
nephronectin - Xenopus tropicalis
Length = 622
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 335 EPFTGSPPGPVTP-AASKPFSPATTANSPPLLRRPSAQP 222
+P T P PV P A ++P PA T PP++ RP+ +P
Sbjct: 375 KPVTRPAPKPVPPPATTRPPQPAVTRPPPPVVTRPAPRP 413
>UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocardia
farcinica|Rep: Putative cold shock protein - Nocardia
farcinica
Length = 122
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTV WF+ + G+GFI +D VFV AI
Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAI 84
>UniRef50_O33052 Cluster: Small cold-shock protein; n=7;
Corynebacterineae|Rep: Small cold-shock protein -
Mycobacterium leprae
Length = 136
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKW++ G+GF+++ D EDV+V +A+
Sbjct: 3 TGKVKWYDADKGFGFLSQED-GEDVYVRSSAL 33
>UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8;
Bacteroidetes|Rep: Cold shock protein - Psychroflexus
torquis ATCC 700755
Length = 63
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
GTVK+FN G+GFI +D FVH + +
Sbjct: 4 GTVKFFNDTKGFGFITEEGVDKDHFVHASGL 34
>UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein;
n=19; Rhodobacterales|Rep: Cold-shock DNA-binding domain
protein - Silicibacter sp. (strain TM1040)
Length = 179
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGEGEAGSLPWLPGRK 283
VKWF+ G+GF N EDVF+H + ++ + V GEA ++ + G++
Sbjct: 108 VKWFDKAKGFGFANVFGRDEDVFLHVEVLRQS----GLSDVQSGEALAMRVIDGKR 159
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
+ V G VKWF+ GYGFI D D+ +H + RN + +V
Sbjct: 9 QHVRGLVKWFDPAKGYGFIVCPDDGPDILLH-VNVLRNFGQSSV 51
>UniRef50_A0X3F5 Cluster: Cold-shock DNA-binding domain protein;
n=1; Shewanella pealeana ATCC 700345|Rep: Cold-shock
DNA-binding domain protein - Shewanella pealeana ATCC
700345
Length = 205
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 95 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPR 220
A+ +G + +N G+GFI + K+ VF+H +A A +PR
Sbjct: 4 AQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPR 45
>UniRef50_UPI0000383847 Cluster: hypothetical protein Magn03006228;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03006228 - Magnetospirillum
magnetotacticum MS-1
Length = 330
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 338 GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
GEP T S P PAAS+P +PA T + PP + +P
Sbjct: 262 GEP-TASEPPTADPAASEPTAPALTVSEPPADEPAAPEP 299
>UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7;
Proteobacteria|Rep: Cold shock domain protein CspD -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 94
Score = 34.3 bits (75), Expect = 1.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRN-DTKEDVFVHQTAI 202
++G VKWFN GYGFI ++ +D+F H + I
Sbjct: 4 LNGKVKWFNNAKGYGFIIKDGKPDDDLFAHFSTI 37
>UniRef50_Q4AG52 Cluster: Cold-shock protein, DNA-binding; n=3;
Bacteroidetes/Chlorobi group|Rep: Cold-shock protein,
DNA-binding - Chlorobium phaeobacteroides BS1
Length = 149
Score = 34.3 bits (75), Expect = 1.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVH 190
+G V +FN G+GFI +T+E VFVH
Sbjct: 88 NGVVTFFNETKGFGFIRDLETQESVFVH 115
>UniRef50_Q5K7N8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1360
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 314 PGPVTPAASKPFSPATTANSPPLLRRPSAQPYVG 213
P P+ P A PF P T N PP R P + P VG
Sbjct: 243 PSPMQPPAPTPFRPPTQQNRPP--RPPMSSPQVG 274
>UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6;
Streptococcus thermophilus|Rep: Cold shock protein CspSt
- Streptococcus thermophilus
Length = 21
Score = 34.3 bits (75), Expect = 1.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRND 166
+GTVKWFN + G+GFI D
Sbjct: 2 NGTVKWFNAEKGFGFITSED 21
>UniRef50_UPI000047036E Cluster: Type-1 angiotensin II
receptor-associated protein (AT1 receptor- associated
protein).; n=3; Homo sapiens|Rep: Type-1 angiotensin II
receptor-associated protein (AT1 receptor- associated
protein). - Homo sapiens
Length = 159
Score = 33.9 bits (74), Expect = 2.0
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 454 AGVHDVLILFCVELLHRLVRHLDEGNIGGGSHGACLQHK-VSLLLAHHRDQ*HQLLQSLS 278
AG+H +L L C+ LH H G +G GS G +HK VS LA H H+ Q L
Sbjct: 65 AGLHCILRLLCLGQLH----HPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLL 120
Query: 277 P 275
P
Sbjct: 121 P 121
>UniRef50_Q69107 Cluster: LAT protein; n=1; Human herpesvirus 2|Rep:
LAT protein - Human herpesvirus 2 (HHV-2) (Human herpes
simplex virus 2)
Length = 119
Score = 33.9 bits (74), Expect = 2.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 347 AA*GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYGR--WQSDAQTHL 174
A+ G P G P P+ S P+SP A + P P ++ + G R W+S A T +
Sbjct: 38 ASAGGPVGGGFPSGSKPSVSSPYSP-WPAGASPAAGAPCSRDH-GWRDRRPWKSSAPTRV 95
Query: 173 PWCHS 159
PW S
Sbjct: 96 PWSKS 100
>UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2;
Salinibacter ruber DSM 13855|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 75
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIA 205
G +K+F+ G+GFI D EDVF+H I+
Sbjct: 4 GKLKFFDTSRGFGFIEPLDGSEDVFLHANNIS 35
>UniRef50_Q0TYV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
Phaeosphaeria nodorum|Rep: Peptidyl-prolyl cis-trans
isomerase - Phaeosphaeria nodorum (Septoria nodorum)
Length = 555
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQ 225
P PP P T AASKP +PA T PP P ++
Sbjct: 319 PSPSPPPKPTTAAASKPPAPAQTQAPPPRELSPESE 354
>UniRef50_P0A985 Cluster: Cold shock-like protein cspH; n=24;
Enterobacteriaceae|Rep: Cold shock-like protein cspH -
Shigella flexneri
Length = 70
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2
Query: 92 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTA 199
++ K++G VK F+ KSG GFI +D +++V VH +A
Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>UniRef50_UPI00015B563D Cluster: PREDICTED: similar to myotubularin;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
myotubularin - Nasonia vitripennis
Length = 665
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANS--PPLLRRPSAQPYVGCYGRW 198
PF PP P P S P P T ++ PL P + ++ CY RW
Sbjct: 523 PFFTPPPPPSAPDGSPPTPPPKTKSNFLKPLHHIPCLEIWLQCYFRW 569
>UniRef50_UPI00015B4CAB Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 972
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
P+T PP P P+ P +P T PP+ R P P
Sbjct: 667 PYTRPPPPPTRPSTYLPPAPPTRPPKPPVTRPPPPPP 703
>UniRef50_UPI00015616C2 Cluster: PREDICTED: similar to ral guanine
nucleotide dissociation stimulator; n=3; Equus
caballus|Rep: PREDICTED: similar to ral guanine
nucleotide dissociation stimulator - Equus caballus
Length = 809
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 335 EPFTGSPPGP-VTPAASKPFSPATTANSPPLLRRPSAQP 222
EP G PGP PA P +P A SPP P+A P
Sbjct: 389 EPEQGPAPGPEAAPAVVPPSAPELEAASPPAASPPAASP 427
>UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1;
Ralstonia eutropha JMP134|Rep: Cold-shock protein,
DNA-binding - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 195
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
++SGT+K +N G+GFI ++ D+FVH
Sbjct: 11 RISGTLKSWNKDKGFGFIAPSNGGRDIFVH 40
>UniRef50_Q2JH08 Cluster: Putative uncharacterized protein; n=3;
Frankia|Rep: Putative uncharacterized protein - Frankia
sp. (strain CcI3)
Length = 291
Score = 33.5 bits (73), Expect = 2.6
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATTANSPP---LLRRPSAQPYVGCYGRWQS-DAQT 180
TG PPG A+ P P TA++PP + R+ + C+ RWQS DA+T
Sbjct: 115 TGPPPG----ASQAPGPPLATASAPPTGEVDRKDPSAVAADCFTRWQSFDART 163
>UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2;
Rhodococcus|Rep: Cold shock protein 7.4 - Rhodococcus
sp. 7/1
Length = 57
Score = 33.5 bits (73), Expect = 2.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 119 KWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+W+N + G+G + +D +D FVH TA+
Sbjct: 3 RWYNAEKGFGCLTPDDGSKDCFVHFTAL 30
>UniRef50_A7CVB9 Cluster: AMP-dependent synthetase and ligase; n=1;
Opitutaceae bacterium TAV2|Rep: AMP-dependent synthetase
and ligase - Opitutaceae bacterium TAV2
Length = 764
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = -2
Query: 317 PPGPVTPAASKPFSPA---TTANSPPLLRRP 234
PP P TPAAS P PA T +++P LL RP
Sbjct: 4 PPSPATPAASAPSRPAPLFTRSHAPWLLTRP 34
>UniRef50_A3WZM6 Cluster: Cold shock DNA binding protein; n=1;
Nitrobacter sp. Nb-311A|Rep: Cold shock DNA binding
protein - Nitrobacter sp. Nb-311A
Length = 77
Score = 33.5 bits (73), Expect = 2.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
K GTV +N + G+GF+ R+ + ++FVH
Sbjct: 9 KYRGTVVHWNAERGFGFVQRDTDQREIFVH 38
>UniRef50_A7R6B6 Cluster: Chromosome undetermined scaffold_1222,
whole genome shotgun sequence; n=21; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1222, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 190
Score = 33.5 bits (73), Expect = 2.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSA 228
P T + P P TPAA P +PA A S P PS+
Sbjct: 132 PSTPAAPAPSTPAAPAPSTPAAPAPSTPAAPAPSS 166
>UniRef50_A2XZG9 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 403
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -2
Query: 335 EPFTGSPPGPVTPAASKPFSPATTANSPP----LLRRPSAQPYVGC 210
+P T + P TPAA+K +PA+T + P RP PY GC
Sbjct: 225 KPATPATTKPTTPAATKTTTPASTKPTTPAPTSFAERPYVCPYDGC 270
>UniRef50_Q0KHU0 Cluster: CG2174-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG2174-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 2693
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
P +PP P+ P + P +P SPP R P +P
Sbjct: 1526 PSVPAPPPPIRPPSMAPPAPPPAPQSPPTARSPEPEP 1562
>UniRef50_A0CIJ2 Cluster: Chromosome undetermined scaffold_19, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_19,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 433
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
+G +K+F+ + YGFI ++ K D+FVH + + K V
Sbjct: 346 TGRLKFFDEQKNYGFIVMDEDKSDIFVHLDDLQKAGVTKEV 386
>UniRef50_Q2U6I0 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 551
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 314 PGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
P PVTP +KP P +T PP P+ QP
Sbjct: 208 PPPVTPGKTKPVPPTSTPVQPPPSVHPTTQP 238
>UniRef50_Q82RP9 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 162
Score = 33.1 bits (72), Expect = 3.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 323 GSPPGPVTPAASKPFSPATTANSPPLLRRP-SAQPYVGCYGRWQSDAQT 180
G+PP P P A P S + TA +PP P S P G R QS T
Sbjct: 81 GAPPSPTVPLAPPPASSSPTAPAPPASPEPVSPSPSAG--SRTQSATTT 127
>UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia
solanacearum UW551|Rep: Cold shock protein - Ralstonia
solanacearum UW551
Length = 82
Score = 33.1 bits (72), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVF 184
+GTVKWFN G+GFI + D+F
Sbjct: 45 TGTVKWFNETKGFGFITPDGGGADLF 70
>UniRef50_Q69JB2 Cluster: Hydroxyproline-rich glycoprotein
DZ-HRGP-like; n=2; Oryza sativa|Rep: Hydroxyproline-rich
glycoprotein DZ-HRGP-like - Oryza sativa subsp. japonica
(Rice)
Length = 216
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 326 TGSPPGPVTPAASKP--FSPATTANSPPLLRRPSAQPY 219
T PP P P P F PA PP RRP+A PY
Sbjct: 60 TAQPPPPDEPPLKPPPSFYPAVLPPEPPPPRRPAATPY 97
>UniRef50_UPI00006CB6F6 Cluster: ''''Cold-shock'''' DNA-binding
domain containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ''''Cold-shock'''' DNA-binding domain
containing protein - Tetrahymena thermophila SB210
Length = 725
Score = 32.7 bits (71), Expect = 4.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 110 GTVKWFNVKSGYGFINRNDTKEDVFVH 190
G++K+F+ YGFI +D D+FVH
Sbjct: 615 GSLKFFDENKNYGFIVMDDDNRDIFVH 641
>UniRef50_UPI000065E7A2 Cluster: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C).; n=1; Takifugu rubripes|Rep: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C). - Takifugu rubripes
Length = 183
Score = 32.7 bits (71), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -2
Query: 320 SPPGPVTPAASKPFSPATTANSPPLLRRPSAQPY 219
SPP P TP P A +SPP LRRP Q Y
Sbjct: 143 SPPPPATPRYQSPPRHAMPRHSPP-LRRPPPQSY 175
>UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces coelicolor
Length = 162
Score = 32.7 bits (71), Expect = 4.6
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRS 235
V+G V F+ GYGFI D EDVF+H + P ++VRS
Sbjct: 22 VAGRVVRFDGTRGYGFIAPEDGGEDVFLHVNDLL--IPEESVRS 63
>UniRef50_Q89RC3 Cluster: Bll2849 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll2849 protein - Bradyrhizobium
japonicum
Length = 658
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 323 GSPPGPVTPAASKPFSPATTAN--SPPLLRRPSAQPY 219
G PPGP A++P P A +PP + RP+A +
Sbjct: 74 GGPPGPAAAPAARPAPPPAMARPAAPPAMARPAAPAF 110
>UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1;
Azoarcus sp. EbN1|Rep: Probable cold shock family
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 189
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
++ GT+ +N G+GFI D +VFVH +A R+ R +
Sbjct: 2 RIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRPQI 44
>UniRef50_Q84IJ3 Cluster: Cold shock protein; n=1; Janthinobacterium
sp. J3|Rep: Cold shock protein - Janthinobacterium sp.
J3
Length = 174
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSV 238
++ G V +N + G+GFI +N T E F+H +A+ + R + S+
Sbjct: 2 RLQGRVIEWNDERGFGFIIQNGTSERTFLHISALRKTKGRPLLGSL 47
>UniRef50_Q3W8S0 Cluster: Cellulose-binding, bacterial type
precursor; n=1; Frankia sp. EAN1pec|Rep:
Cellulose-binding, bacterial type precursor - Frankia
sp. EAN1pec
Length = 539
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYG 204
P TG P G T S P +P + +PP P A P G G
Sbjct: 192 PGTGQPSGAPTSTPSTPTTPPASTTAPPAPPAPPAPPSNGSSG 234
>UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Polaromonas sp. JS666|Rep: Cold-shock DNA-binding
domain protein - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 193
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAV 229
+ GT+K +N + G GFI + +++FVH +A R+ AV
Sbjct: 7 RFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAV 49
>UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293|Rep: Cold
shock protein - Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 74
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+GTVK + + GYG+I ++ +DVFVH I
Sbjct: 3 TGTVKIWQKERGYGYITPDEGGDDVFVHFNGI 34
>UniRef50_A6T6Y7 Cluster: Cell division protein; n=2;
Enterobacteriaceae|Rep: Cell division protein -
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Length = 1417
Score = 32.7 bits (71), Expect = 4.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 314 PGPVTPAASKPFSPATTANSPPL 246
P P +P A+KP +P TTA+ PP+
Sbjct: 613 PEPESPIATKPLTPPTTASKPPV 635
>UniRef50_A4X7H2 Cluster: Anthranilate synthase component I and
chorismate binding protein; n=2; Salinispora|Rep:
Anthranilate synthase component I and chorismate binding
protein - Salinispora tropica CNB-440
Length = 408
Score = 32.7 bits (71), Expect = 4.6
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 353 LSAA*GEPFTGSPPGPVTPAASKPFSPATTANSPPLLR-RPSAQPYVGCY-GRWQSDAQT 180
+SAA G G PGP TPA + P P R RP+ + G + G W A++
Sbjct: 91 VSAAAGALGVGRGPGPATPAPALPEVAVVVYGHAPASRGRPARRRSSGWWLGAW---AES 147
Query: 179 HLPWCHS 159
PW H+
Sbjct: 148 WAPWQHA 154
>UniRef50_A1G720 Cluster: Tetratricopeptide TPR_2; n=2;
Salinispora|Rep: Tetratricopeptide TPR_2 - Salinispora
arenicola CNS205
Length = 1143
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 338 GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
G P +G+P GP + A S+P S T +PP R P P
Sbjct: 339 GRPVSGTPNGPTSGAPSRPAS--GTTGTPPPPRPPQGHP 375
>UniRef50_Q9SUX2 Cluster: Extensin-like protein; n=2; Arabidopsis
thaliana|Rep: Extensin-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 32.7 bits (71), Expect = 4.6
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVG 213
T SPP P+ P KP P TT PP + P + P VG
Sbjct: 263 TISPP-PLPPQTLKPPPPQTTPPPPPAITPPLSPPLVG 299
>UniRef50_Q4P6X3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 495
Score = 32.7 bits (71), Expect = 4.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 320 SPPGPVTPAASKPFSPATTAN 258
SP PV PA+S P+SPAT A+
Sbjct: 118 SPTAPVAPASSSPYSPATPAS 138
>UniRef50_UPI0000F2CB06 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 167
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -2
Query: 332 PFTGSPP----GPVTPAASKP-FSPATTANSPPLLRRPSAQPYVGCYGRWQSDA 186
P +PP GP P S P +P ++PP P++Q C GR Q+D+
Sbjct: 66 PAAATPPPNQSGPHPPDGSPPSLAPCLPRSAPPATPGPTSQCQADCQGRHQADS 119
>UniRef50_UPI0000DD7E8C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 278
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATT 264
T +PPGP T AA+ PFSP+T+
Sbjct: 236 TWAPPGPGTLAAASPFSPSTS 256
>UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease
sensitive element binding protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclease sensitive
element binding protein 1 - Rattus norvegicus
Length = 90
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 277 EKGFEAAGVTGPGGEPVKGSPYAA 348
+KG +A TGPGG PV+G YAA
Sbjct: 6 KKGPDAENDTGPGGAPVQGRKYAA 29
>UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG9705-PA, isoform A - Tribolium castaneum
Length = 121
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 98 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
+ + G +K F + G+GFI D ED+FVH
Sbjct: 40 QNLYGEIKSFCREKGHGFITPEDGSEDIFVH 70
>UniRef50_Q63708 Cluster: Transcription factor EF1; n=1; Rattus
sp.|Rep: Transcription factor EF1 - Rattus sp
Length = 83
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +3
Query: 120 NGSTSRVDMVSSTGMTPRKMCLCIRLP 200
NGST VSSTGMTPRK L RLP
Sbjct: 59 NGSTKGT--VSSTGMTPRKTYLYTRLP 83
>UniRef50_Q5PBP1 Cluster: Cold shock protein; n=7;
Anaplasmataceae|Rep: Cold shock protein - Anaplasma
marginale (strain St. Maries)
Length = 92
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 13/48 (27%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFI---NRNDTK----------EDVFVHQTAIARN 211
+G VKWF+V+ GYGFI +D K +DVFVH T++ R+
Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRS 60
>UniRef50_Q48AJ7 Cluster: Cold-shock DNA-binding domain family
protein; n=1; Colwellia psychrerythraea 34H|Rep:
Cold-shock DNA-binding domain family protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 201
Score = 32.3 bits (70), Expect = 6.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 116 VKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSV 238
++W N +GFI N + + +F+H+TA+ N + +
Sbjct: 8 IRW-NTDKAFGFITPNGSGDTIFIHKTALKNRNRTPKINDI 47
>UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma
proteobacterium HTCC2207|Rep: Cold shock protein - gamma
proteobacterium HTCC2207
Length = 89
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKWF+ G+GFI ++ + ++F H I
Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNI 35
>UniRef50_A7CPS0 Cluster: Mu-like prophage protein gp29-like
protein; n=1; Opitutaceae bacterium TAV2|Rep: Mu-like
prophage protein gp29-like protein - Opitutaceae
bacterium TAV2
Length = 611
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 320 SPPGPVTPAASKPF-SPATTANSPPLLR 240
SPP VTP S P SPAT ++SPP+ R
Sbjct: 34 SPPMAVTPTHSTPIASPATASSSPPVPR 61
>UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein;
n=1; Shewanella putrefaciens 200|Rep: Cold-shock
DNA-binding domain protein - Shewanella putrefaciens 200
Length = 149
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 101 KVSGTVKWFNVKSGYGFINRNDTKEDVFVH 190
++ G VKWF+V G+GFI D + H
Sbjct: 2 RIQGVVKWFSVPQGFGFITSITEGTDHYFH 31
>UniRef50_A1UMV6 Cluster: Putative uncharacterized protein; n=4;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 144
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 338 GEPFTGSPPGPVTPAASKPFSPATTANSPP 249
G PF PG TP ++P SPATTA + P
Sbjct: 115 GMPFGPGQPGMQTPQQTQPGSPATTAPARP 144
>UniRef50_Q0DJF4 Cluster: Os05g0293200 protein; n=6; Oryza sativa|Rep:
Os05g0293200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1496
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 335 EPFTGSPPGPVTPAASKPFSPA-TTANSPPLLRRPSAQP 222
EP T S P P PAA +P SP +A SPP R + +P
Sbjct: 1005 EPTTSSAPAP-EPAAHEPASPGPLSARSPPSARSTARRP 1042
>UniRef50_Q00UK9 Cluster: Chromosome 16 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 882
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 320 SPPGPVTPAASKPFSPATTANSPPLLRRPS 231
+PP PV +KP +PA PP L+RPS
Sbjct: 822 TPPRPVEKTEAKPPAPAVQMAPPPRLQRPS 851
>UniRef50_Q9XYC6 Cluster: Axon-associated SH3 binding-like protein
168; n=1; Procambarus clarkii|Rep: Axon-associated SH3
binding-like protein 168 - Procambarus clarkii (Red
swamp crayfish)
Length = 168
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 308 PVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYGRWQSDAQTHLPWCHS 159
P PA +P PA S P +RPS G + + Q P CH+
Sbjct: 106 PSDPATQRPNDPAAQRPSDPATQRPSGPAAQRPSGEYTNKDQLRRPTCHA 155
>UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:
CG9705-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 143
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 104 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>UniRef50_Q6YI85 Cluster: Runt protein; n=4; Branchiostoma|Rep: Runt
protein - Branchiostoma lanceolatum (Common lancelet)
(Amphioxus)
Length = 490
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATTANSPPLL----RRPSAQPYVGCYGRWQSDAQ 183
+G+P GP P+ P + + T N P +L + S+QP G +G Q D Q
Sbjct: 420 SGTPQGPREPSILAPTTNSQTQNKPHVLPAQEKEASSQPGSGNHGNRQQDEQ 471
>UniRef50_Q60R78 Cluster: Putative uncharacterized protein CBG21491;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG21491 - Caenorhabditis
briggsae
Length = 429
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -2
Query: 338 GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVG 213
G P TGSPP P + P A + SPP RPS P G
Sbjct: 322 GAPPTGSPPPPPPQSGGSPPPGAPPSGSPP--PRPSGAPPAG 361
>UniRef50_Q7S322 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 943
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -3
Query: 394 HLDEGNIGGGSHGACLQHKVSLLLAHHRDQ*HQLLQSLSPRQPRQTPRLSFADRAHSL 221
H +G+ G H L K + + +HHR Q H L S+S RQ P HSL
Sbjct: 483 HQGQGHPHGLPHQHPLMMKPNTIPSHHRQQPHASLASMSSHSRRQQPFHHGVHPYHSL 540
>UniRef50_Q6FTP1 Cluster: Similar to sp|P37370 Saccharomyces
cerevisiae YLR337c VRP1; n=2; cellular organisms|Rep:
Similar to sp|P37370 Saccharomyces cerevisiae YLR337c
VRP1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 779
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -2
Query: 353 LSAA*GEPFTGSPPGPVTPAASKPFSPATTA----NSPPLLRRPSAQP 222
+ +A P G+PP P T A S P +PA A +PP+ P A P
Sbjct: 192 IPSAPAPPVPGAPPAPPTSAPSIPSAPAPPAPPAPPAPPMAAAPPAPP 239
>UniRef50_A4UCN1 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 343
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
T SPP P P S P P T PP + P+ P
Sbjct: 23 TTSPPPPPPPPVSSPSPPPATTPPPPTTQPPATPP 57
>UniRef50_P34445 Cluster: Uncharacterized protein F54C8.7; n=3;
Caenorhabditis|Rep: Uncharacterized protein F54C8.7 -
Caenorhabditis elegans
Length = 307
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 326 TGSPPGPVTPAASKPFSPATTANSPP 249
T SPP P P A PF+P T +S P
Sbjct: 5 TASPPEPSAPPADSPFAPVTQNDSSP 30
>UniRef50_Q8IN94 Cluster: Trithorax group protein osa; n=9;
Eukaryota|Rep: Trithorax group protein osa - Drosophila
melanogaster (Fruit fly)
Length = 2716
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 323 GSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYGRWQSDAQTHLP 171
GS P +P + P PA+ + PPL ++P P+V G S + H P
Sbjct: 414 GSSP---SPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSSPGHAP 461
>UniRef50_UPI00015B471C Cluster: PREDICTED: similar to teashirt-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to teashirt-like protein - Nasonia vitripennis
Length = 1319
Score = 31.9 bits (69), Expect = 8.0
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 332 PFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
P TGSPP P T ++S P SP + PL P P
Sbjct: 116 PATGSPPPPATRSSSSPVSPPGSIVPLPLGVHPLLPP 152
>UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins; n=1;
Brevibacterium linens BL2|Rep: COG1278: Cold shock
proteins - Brevibacterium linens BL2
Length = 126
Score = 31.9 bits (69), Expect = 8.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 107 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 202
+G VKWF+V G+GF+ D + F+H + +
Sbjct: 3 TGRVKWFDVDKGFGFVIAEDGSQ-AFLHSSVL 33
>UniRef50_UPI000069EE3D Cluster: UPI000069EE3D related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069EE3D UniRef100 entry -
Xenopus tropicalis
Length = 167
Score = 31.9 bits (69), Expect = 8.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 329 FTGSPPGPVTPAASKPFSPATTANSPP-LLRRPSAQPYV 216
F PP ++S P SP+++ NSPP +L+ P P V
Sbjct: 44 FPQHPPALPQASSSSPISPSSSPNSPPSILQLPQLSPQV 82
>UniRef50_UPI0000EB1318 Cluster: UPI0000EB1318 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1318 UniRef100
entry - Canis familiaris
Length = 574
Score = 31.9 bits (69), Expect = 8.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 317 PPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYG 204
PPGPV P P S + A++ PL+ +P +P VG G
Sbjct: 169 PPGPVLPGPPAPHS--SPASACPLVGKPGRRPGVGLPG 204
>UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n=1;
Bos taurus|Rep: UPI0000F31DEE UniRef100 entry - Bos
Taurus
Length = 462
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -2
Query: 317 PPGPVTPAASKPFSP--ATTA-NSPPLLRRPSAQP 222
PP +TPAAS PF P +TTA SPP R P
Sbjct: 286 PPPAITPAASPPFPPPTSTTATGSPPSSTRGDPSP 320
>UniRef50_Q14839-2 Cluster: Isoform 2 of Q14839 ; n=19;
Euteleostomi|Rep: Isoform 2 of Q14839 - Homo sapiens
(Human)
Length = 1940
Score = 31.9 bits (69), Expect = 8.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -2
Query: 323 GSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGCYGRWQSDAQTHLPW 168
G PP P TP P + T + PL RP Q +V +WQ + H W
Sbjct: 511 GQPPSP-TPVPRPPDADPNTPSPKPLEGRPERQFFV----KWQGMSYWHCSW 557
>UniRef50_Q98J75 Cluster: Probable transcriptional repressor; n=1;
Mesorhizobium loti|Rep: Probable transcriptional
repressor - Rhizobium loti (Mesorhizobium loti)
Length = 586
Score = 31.9 bits (69), Expect = 8.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 338 GEPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQP 222
G+ +PP PV A +P P AN PP + P+A P
Sbjct: 215 GQDVASAPPAPVPAPAPQPAPPPIAANPPP-VAVPAAPP 252
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,555,402
Number of Sequences: 1657284
Number of extensions: 8719676
Number of successful extensions: 49629
Number of sequences better than 10.0: 265
Number of HSP's better than 10.0 without gapping: 41934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48981
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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