Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1193X
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   4.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   4.3  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   5.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   9.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 335 EPFTGSPPGPVTPAASKPFSPATTANSPPLLRRPSAQPYVGC 210
           +PF  SP G  TP      SPA++  S    +R +  PY GC
Sbjct: 839 QPF--SPSGGTTPVPVSLLSPASSHYS----QRSARSPYGGC 874


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 397 RHLDEGNIGGGSHGAC 350
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 397 RHLDEGNIGGGSHGAC 350
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 330 FYWLTTGTSNTSC 292
           F+W   GTSN +C
Sbjct: 264 FHWAEQGTSNNAC 276


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 301 HQLLQSLSPRQPRQTPRLS 245
           HQ  Q  SP+ P + PRL+
Sbjct: 310 HQQQQRSSPQPPEKMPRLN 328


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 409 HRLVRHLDEGNIGGGS 362
           HRL   L  G +GGGS
Sbjct: 665 HRLAASLGGGAVGGGS 680


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,045
Number of Sequences: 2352
Number of extensions: 8763
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)